Protein–RNA interactions for Protein: A6NGZ8

SMIM9, Small integral membrane protein 9, humanhuman

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM9A6NGZ8 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SMIM9A6NGZ8 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SMIM9A6NGZ8 AL499627.2-201ENST00000606283 725 ntBASIC16.1■□□□□ 0.17
SMIM9A6NGZ8 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SMIM9A6NGZ8 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC16.1■□□□□ 0.17
SMIM9A6NGZ8 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
SMIM9A6NGZ8 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
SMIM9A6NGZ8 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SMIM9A6NGZ8 ANOS2P-203ENST00000472227 1816 ntBASIC16.1■□□□□ 0.17
SMIM9A6NGZ8 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SMIM9A6NGZ8 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SMIM9A6NGZ8 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
SMIM9A6NGZ8 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
SMIM9A6NGZ8 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SMIM9A6NGZ8 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SMIM9A6NGZ8 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC16.09■□□□□ 0.17
SMIM9A6NGZ8 UNC93B3-201ENST00000308076 687 ntBASIC16.09■□□□□ 0.17
SMIM9A6NGZ8 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SMIM9A6NGZ8 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
SMIM9A6NGZ8 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SMIM9A6NGZ8 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SMIM9A6NGZ8 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC16.09■□□□□ 0.17
SMIM9A6NGZ8 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC16.09■□□□□ 0.17
SMIM9A6NGZ8 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SMIM9A6NGZ8 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC16.09■□□□□ 0.17
SMIM9A6NGZ8 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC16.09■□□□□ 0.17
SMIM9A6NGZ8 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
SMIM9A6NGZ8 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC16.09■□□□□ 0.17
SMIM9A6NGZ8 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
SMIM9A6NGZ8 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
SMIM9A6NGZ8 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC16.08■□□□□ 0.17
SMIM9A6NGZ8 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
SMIM9A6NGZ8 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
SMIM9A6NGZ8 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
SMIM9A6NGZ8 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
SMIM9A6NGZ8 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC16.08■□□□□ 0.17
SMIM9A6NGZ8 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
SMIM9A6NGZ8 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC16.08■□□□□ 0.17
SMIM9A6NGZ8 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SMIM9A6NGZ8 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
SMIM9A6NGZ8 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
SMIM9A6NGZ8 HES6-206ENST00000409574 738 ntTSL 2 BASIC16.08■□□□□ 0.16
SMIM9A6NGZ8 PTCHD3P2-201ENST00000424937 1205 ntBASIC16.08■□□□□ 0.16
SMIM9A6NGZ8 NALT1-201ENST00000429224 738 ntTSL 5 BASIC16.08■□□□□ 0.16
SMIM9A6NGZ8 AC096631.2-201ENST00000436136 790 ntBASIC16.08■□□□□ 0.16
SMIM9A6NGZ8 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
SMIM9A6NGZ8 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
SMIM9A6NGZ8 AL139246.5-201ENST00000606645 996 ntBASIC16.08■□□□□ 0.16
SMIM9A6NGZ8 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC16.08■□□□□ 0.16
SMIM9A6NGZ8 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SMIM9A6NGZ8 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC16.08■□□□□ 0.16
SMIM9A6NGZ8 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SMIM9A6NGZ8 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SMIM9A6NGZ8 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SMIM9A6NGZ8 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC16.08■□□□□ 0.16
SMIM9A6NGZ8 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC16.08■□□□□ 0.16
SMIM9A6NGZ8 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC16.07■□□□□ 0.16
SMIM9A6NGZ8 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SMIM9A6NGZ8 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
SMIM9A6NGZ8 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SMIM9A6NGZ8 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
SMIM9A6NGZ8 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SMIM9A6NGZ8 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
SMIM9A6NGZ8 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SMIM9A6NGZ8 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
SMIM9A6NGZ8 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
SMIM9A6NGZ8 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SMIM9A6NGZ8 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC16.07■□□□□ 0.16
SMIM9A6NGZ8 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SMIM9A6NGZ8 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC16.07■□□□□ 0.16
SMIM9A6NGZ8 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC16.07■□□□□ 0.16
SMIM9A6NGZ8 AC133561.4-201ENST00000566112 224 ntBASIC16.07■□□□□ 0.16
SMIM9A6NGZ8 MIR3181-201ENST00000578512 73 ntBASIC16.07■□□□□ 0.16
SMIM9A6NGZ8 AL136162.1-201ENST00000607711 1078 ntBASIC16.07■□□□□ 0.16
SMIM9A6NGZ8 pRNA.6-201ENST00000610482 90 ntBASIC16.07■□□□□ 0.16
SMIM9A6NGZ8 pRNA.5-201ENST00000612139 90 ntBASIC16.07■□□□□ 0.16
SMIM9A6NGZ8 pRNA.11-201ENST00000618423 90 ntBASIC16.07■□□□□ 0.16
SMIM9A6NGZ8 pRNA.13-201ENST00000619112 90 ntBASIC16.07■□□□□ 0.16
SMIM9A6NGZ8 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC16.07■□□□□ 0.16
SMIM9A6NGZ8 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
SMIM9A6NGZ8 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
SMIM9A6NGZ8 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
SMIM9A6NGZ8 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SMIM9A6NGZ8 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC16.07■□□□□ 0.16
SMIM9A6NGZ8 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
SMIM9A6NGZ8 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SMIM9A6NGZ8 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SMIM9A6NGZ8 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SMIM9A6NGZ8 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SMIM9A6NGZ8 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SMIM9A6NGZ8 AL353803.4-201ENST00000565882 1934 ntBASIC16.06■□□□□ 0.16
SMIM9A6NGZ8 AC135279.3-201ENST00000610945 1311 ntBASIC16.06■□□□□ 0.16
SMIM9A6NGZ8 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SMIM9A6NGZ8 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SMIM9A6NGZ8 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
SMIM9A6NGZ8 SERBP1P1-201ENST00000396021 1160 ntBASIC16.06■□□□□ 0.16
SMIM9A6NGZ8 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
SMIM9A6NGZ8 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
SMIM9A6NGZ8 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SMIM9A6NGZ8 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC16.06■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 14.4 ms