Protein–RNA interactions for Protein: A0A1B0GTZ2

CCDC196, Putative coiled-coil domain-containing protein 196, humanhuman

Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC196A0A1B0GTZ2 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC25.99■■□□□ 1.75
CCDC196A0A1B0GTZ2 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC25.98■■□□□ 1.75
CCDC196A0A1B0GTZ2 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC25.98■■□□□ 1.75
CCDC196A0A1B0GTZ2 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
CCDC196A0A1B0GTZ2 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
CCDC196A0A1B0GTZ2 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
CCDC196A0A1B0GTZ2 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC25.98■■□□□ 1.75
CCDC196A0A1B0GTZ2 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC25.98■■□□□ 1.75
CCDC196A0A1B0GTZ2 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC25.98■■□□□ 1.75
CCDC196A0A1B0GTZ2 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC25.98■■□□□ 1.75
CCDC196A0A1B0GTZ2 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC25.98■■□□□ 1.75
CCDC196A0A1B0GTZ2 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
CCDC196A0A1B0GTZ2 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC25.98■■□□□ 1.75
CCDC196A0A1B0GTZ2 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC25.98■■□□□ 1.75
CCDC196A0A1B0GTZ2 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC25.97■■□□□ 1.75
CCDC196A0A1B0GTZ2 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC25.96■■□□□ 1.75
CCDC196A0A1B0GTZ2 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
CCDC196A0A1B0GTZ2 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC25.96■■□□□ 1.75
CCDC196A0A1B0GTZ2 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
CCDC196A0A1B0GTZ2 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
CCDC196A0A1B0GTZ2 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
CCDC196A0A1B0GTZ2 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC25.96■■□□□ 1.75
CCDC196A0A1B0GTZ2 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
CCDC196A0A1B0GTZ2 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
CCDC196A0A1B0GTZ2 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC25.96■■□□□ 1.75
CCDC196A0A1B0GTZ2 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC25.95■■□□□ 1.75
CCDC196A0A1B0GTZ2 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC25.95■■□□□ 1.75
CCDC196A0A1B0GTZ2 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.75
CCDC196A0A1B0GTZ2 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC25.95■■□□□ 1.74
CCDC196A0A1B0GTZ2 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC25.95■■□□□ 1.74
CCDC196A0A1B0GTZ2 AC131281.2-201ENST00000520478 145 ntBASIC25.95■■□□□ 1.74
CCDC196A0A1B0GTZ2 AC092171.4-201ENST00000609130 632 ntBASIC25.95■■□□□ 1.74
CCDC196A0A1B0GTZ2 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC25.95■■□□□ 1.74
CCDC196A0A1B0GTZ2 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC25.95■■□□□ 1.74
CCDC196A0A1B0GTZ2 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC25.95■■□□□ 1.74
CCDC196A0A1B0GTZ2 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC25.95■■□□□ 1.74
CCDC196A0A1B0GTZ2 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
CCDC196A0A1B0GTZ2 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC25.95■■□□□ 1.74
CCDC196A0A1B0GTZ2 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
CCDC196A0A1B0GTZ2 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
CCDC196A0A1B0GTZ2 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
CCDC196A0A1B0GTZ2 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC25.94■■□□□ 1.74
CCDC196A0A1B0GTZ2 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC25.94■■□□□ 1.74
CCDC196A0A1B0GTZ2 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC25.94■■□□□ 1.74
CCDC196A0A1B0GTZ2 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC25.94■■□□□ 1.74
CCDC196A0A1B0GTZ2 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC25.94■■□□□ 1.74
CCDC196A0A1B0GTZ2 MIR4466-201ENST00000606121 54 ntBASIC25.94■■□□□ 1.74
CCDC196A0A1B0GTZ2 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
CCDC196A0A1B0GTZ2 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
CCDC196A0A1B0GTZ2 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC25.94■■□□□ 1.74
CCDC196A0A1B0GTZ2 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC25.93■■□□□ 1.74
CCDC196A0A1B0GTZ2 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC25.93■■□□□ 1.74
CCDC196A0A1B0GTZ2 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
CCDC196A0A1B0GTZ2 AC009086.3-201ENST00000623486 1008 ntBASIC25.93■■□□□ 1.74
CCDC196A0A1B0GTZ2 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC25.93■■□□□ 1.74
CCDC196A0A1B0GTZ2 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
CCDC196A0A1B0GTZ2 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC25.92■■□□□ 1.74
CCDC196A0A1B0GTZ2 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
CCDC196A0A1B0GTZ2 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC25.92■■□□□ 1.74
CCDC196A0A1B0GTZ2 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
CCDC196A0A1B0GTZ2 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
CCDC196A0A1B0GTZ2 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC25.92■■□□□ 1.74
CCDC196A0A1B0GTZ2 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC25.91■■□□□ 1.74
CCDC196A0A1B0GTZ2 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC25.91■■□□□ 1.74
CCDC196A0A1B0GTZ2 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC25.91■■□□□ 1.74
CCDC196A0A1B0GTZ2 AC099791.2-201ENST00000605725 427 ntBASIC25.91■■□□□ 1.74
CCDC196A0A1B0GTZ2 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC25.91■■□□□ 1.74
CCDC196A0A1B0GTZ2 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC25.91■■□□□ 1.74
CCDC196A0A1B0GTZ2 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC25.9■■□□□ 1.74
CCDC196A0A1B0GTZ2 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC25.9■■□□□ 1.74
CCDC196A0A1B0GTZ2 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC25.9■■□□□ 1.74
CCDC196A0A1B0GTZ2 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
CCDC196A0A1B0GTZ2 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC25.9■■□□□ 1.74
CCDC196A0A1B0GTZ2 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC25.9■■□□□ 1.74
CCDC196A0A1B0GTZ2 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC25.9■■□□□ 1.74
CCDC196A0A1B0GTZ2 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
CCDC196A0A1B0GTZ2 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC25.9■■□□□ 1.74
CCDC196A0A1B0GTZ2 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
CCDC196A0A1B0GTZ2 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
CCDC196A0A1B0GTZ2 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
CCDC196A0A1B0GTZ2 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
CCDC196A0A1B0GTZ2 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC25.89■■□□□ 1.74
CCDC196A0A1B0GTZ2 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
CCDC196A0A1B0GTZ2 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
CCDC196A0A1B0GTZ2 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
CCDC196A0A1B0GTZ2 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC25.89■■□□□ 1.74
CCDC196A0A1B0GTZ2 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC25.89■■□□□ 1.74
CCDC196A0A1B0GTZ2 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC25.89■■□□□ 1.74
CCDC196A0A1B0GTZ2 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC25.89■■□□□ 1.74
CCDC196A0A1B0GTZ2 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC25.89■■□□□ 1.73
CCDC196A0A1B0GTZ2 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.73
CCDC196A0A1B0GTZ2 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
CCDC196A0A1B0GTZ2 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC25.88■■□□□ 1.73
CCDC196A0A1B0GTZ2 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC25.88■■□□□ 1.73
CCDC196A0A1B0GTZ2 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC25.88■■□□□ 1.73
CCDC196A0A1B0GTZ2 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
CCDC196A0A1B0GTZ2 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC25.88■■□□□ 1.73
CCDC196A0A1B0GTZ2 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC25.88■■□□□ 1.73
CCDC196A0A1B0GTZ2 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC25.87■■□□□ 1.73
CCDC196A0A1B0GTZ2 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC25.87■■□□□ 1.73
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms