Protein–RNA interactions for Protein: A0A0C4DH34

IGHV4-28, Immunoglobulin heavy variable 4-28, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-28A0A0C4DH34 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
IGHV4-28A0A0C4DH34 AC144652.1-201ENST00000609974 1624 ntBASIC16.1■□□□□ 0.17
IGHV4-28A0A0C4DH34 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
IGHV4-28A0A0C4DH34 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
IGHV4-28A0A0C4DH34 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
IGHV4-28A0A0C4DH34 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC16.1■□□□□ 0.17
IGHV4-28A0A0C4DH34 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC16.1■□□□□ 0.17
IGHV4-28A0A0C4DH34 AL031432.3-201ENST00000607698 485 ntBASIC16.1■□□□□ 0.17
IGHV4-28A0A0C4DH34 AC136469.2-201ENST00000623944 1028 ntBASIC16.1■□□□□ 0.17
IGHV4-28A0A0C4DH34 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC16.1■□□□□ 0.17
IGHV4-28A0A0C4DH34 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
IGHV4-28A0A0C4DH34 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
IGHV4-28A0A0C4DH34 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
IGHV4-28A0A0C4DH34 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
IGHV4-28A0A0C4DH34 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
IGHV4-28A0A0C4DH34 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
IGHV4-28A0A0C4DH34 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC16.1■□□□□ 0.17
IGHV4-28A0A0C4DH34 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
IGHV4-28A0A0C4DH34 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
IGHV4-28A0A0C4DH34 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
IGHV4-28A0A0C4DH34 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC16.09■□□□□ 0.17
IGHV4-28A0A0C4DH34 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC16.09■□□□□ 0.17
IGHV4-28A0A0C4DH34 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC16.09■□□□□ 0.17
IGHV4-28A0A0C4DH34 AF213884.3-201ENST00000563833 479 ntBASIC16.09■□□□□ 0.17
IGHV4-28A0A0C4DH34 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
IGHV4-28A0A0C4DH34 FP325331.1-202ENST00000623531 1380 ntBASIC16.09■□□□□ 0.17
IGHV4-28A0A0C4DH34 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
IGHV4-28A0A0C4DH34 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
IGHV4-28A0A0C4DH34 GTSE1-AS1-202ENST00000623117 1518 ntBASIC16.09■□□□□ 0.17
IGHV4-28A0A0C4DH34 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
IGHV4-28A0A0C4DH34 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
IGHV4-28A0A0C4DH34 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
IGHV4-28A0A0C4DH34 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
IGHV4-28A0A0C4DH34 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
IGHV4-28A0A0C4DH34 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC16.08■□□□□ 0.16
IGHV4-28A0A0C4DH34 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC16.08■□□□□ 0.16
IGHV4-28A0A0C4DH34 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
IGHV4-28A0A0C4DH34 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
IGHV4-28A0A0C4DH34 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC16.08■□□□□ 0.16
IGHV4-28A0A0C4DH34 LINC01529-204ENST00000636474 1715 ntBASIC16.08■□□□□ 0.16
IGHV4-28A0A0C4DH34 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC16.08■□□□□ 0.16
IGHV4-28A0A0C4DH34 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
IGHV4-28A0A0C4DH34 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
IGHV4-28A0A0C4DH34 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
IGHV4-28A0A0C4DH34 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
IGHV4-28A0A0C4DH34 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC16.07■□□□□ 0.16
IGHV4-28A0A0C4DH34 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
IGHV4-28A0A0C4DH34 SUDS3P1-201ENST00000505831 966 ntBASIC16.07■□□□□ 0.16
IGHV4-28A0A0C4DH34 AP001330.3-201ENST00000520123 633 ntBASIC16.07■□□□□ 0.16
IGHV4-28A0A0C4DH34 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
IGHV4-28A0A0C4DH34 DUX4L4-201ENST00000566884 1269 ntBASIC16.07■□□□□ 0.16
IGHV4-28A0A0C4DH34 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC16.07■□□□□ 0.16
IGHV4-28A0A0C4DH34 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC16.07■□□□□ 0.16
IGHV4-28A0A0C4DH34 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC16.07■□□□□ 0.16
IGHV4-28A0A0C4DH34 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC16.07■□□□□ 0.16
IGHV4-28A0A0C4DH34 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
IGHV4-28A0A0C4DH34 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC16.07■□□□□ 0.16
IGHV4-28A0A0C4DH34 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
IGHV4-28A0A0C4DH34 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
IGHV4-28A0A0C4DH34 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
IGHV4-28A0A0C4DH34 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
IGHV4-28A0A0C4DH34 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC16.07■□□□□ 0.16
IGHV4-28A0A0C4DH34 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
IGHV4-28A0A0C4DH34 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC16.06■□□□□ 0.16
IGHV4-28A0A0C4DH34 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
IGHV4-28A0A0C4DH34 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
IGHV4-28A0A0C4DH34 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
IGHV4-28A0A0C4DH34 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
IGHV4-28A0A0C4DH34 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
IGHV4-28A0A0C4DH34 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC16.06■□□□□ 0.16
IGHV4-28A0A0C4DH34 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC16.06■□□□□ 0.16
IGHV4-28A0A0C4DH34 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC16.06■□□□□ 0.16
IGHV4-28A0A0C4DH34 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
IGHV4-28A0A0C4DH34 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
IGHV4-28A0A0C4DH34 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
IGHV4-28A0A0C4DH34 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC16.06■□□□□ 0.16
IGHV4-28A0A0C4DH34 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
IGHV4-28A0A0C4DH34 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC16.06■□□□□ 0.16
IGHV4-28A0A0C4DH34 AC079630.1-202ENST00000618127 1840 ntBASIC16.05■□□□□ 0.16
IGHV4-28A0A0C4DH34 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
IGHV4-28A0A0C4DH34 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC16.05■□□□□ 0.16
IGHV4-28A0A0C4DH34 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
IGHV4-28A0A0C4DH34 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
IGHV4-28A0A0C4DH34 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
IGHV4-28A0A0C4DH34 EBPL-204ENST00000378272 766 ntTSL 3 BASIC16.05■□□□□ 0.16
IGHV4-28A0A0C4DH34 MIR939-201ENST00000401314 82 ntBASIC16.05■□□□□ 0.16
IGHV4-28A0A0C4DH34 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC16.05■□□□□ 0.16
IGHV4-28A0A0C4DH34 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC16.05■□□□□ 0.16
IGHV4-28A0A0C4DH34 AC008764.7-201ENST00000593779 1081 ntBASIC16.05■□□□□ 0.16
IGHV4-28A0A0C4DH34 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
IGHV4-28A0A0C4DH34 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC16.05■□□□□ 0.16
IGHV4-28A0A0C4DH34 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
IGHV4-28A0A0C4DH34 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
IGHV4-28A0A0C4DH34 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
IGHV4-28A0A0C4DH34 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
IGHV4-28A0A0C4DH34 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
IGHV4-28A0A0C4DH34 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC16.04■□□□□ 0.16
IGHV4-28A0A0C4DH34 AC091305.1-201ENST00000479476 895 ntBASIC16.04■□□□□ 0.16
IGHV4-28A0A0C4DH34 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC16.04■□□□□ 0.16
IGHV4-28A0A0C4DH34 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 17.2 ms