Protein–RNA interactions for Protein: A0A0B4J240

TRAV10, T-cell receptor alpha variable 10 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV10A0A0B4J240 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
TRAV10A0A0B4J240 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRAV10A0A0B4J240 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC15.74■□□□□ 0.11
TRAV10A0A0B4J240 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC15.74■□□□□ 0.11
TRAV10A0A0B4J240 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
TRAV10A0A0B4J240 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRAV10A0A0B4J240 AC144652.1-201ENST00000609974 1624 ntBASIC15.73■□□□□ 0.11
TRAV10A0A0B4J240 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
TRAV10A0A0B4J240 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
TRAV10A0A0B4J240 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
TRAV10A0A0B4J240 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC15.73■□□□□ 0.11
TRAV10A0A0B4J240 AL499627.2-201ENST00000606283 725 ntBASIC15.73■□□□□ 0.11
TRAV10A0A0B4J240 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC15.73■□□□□ 0.11
TRAV10A0A0B4J240 LINC01529-204ENST00000636474 1715 ntBASIC15.73■□□□□ 0.11
TRAV10A0A0B4J240 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC15.73■□□□□ 0.11
TRAV10A0A0B4J240 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC15.73■□□□□ 0.11
TRAV10A0A0B4J240 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRAV10A0A0B4J240 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRAV10A0A0B4J240 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRAV10A0A0B4J240 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC15.72■□□□□ 0.11
TRAV10A0A0B4J240 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRAV10A0A0B4J240 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRAV10A0A0B4J240 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRAV10A0A0B4J240 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
TRAV10A0A0B4J240 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
TRAV10A0A0B4J240 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC15.72■□□□□ 0.11
TRAV10A0A0B4J240 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC15.72■□□□□ 0.11
TRAV10A0A0B4J240 SLC47A1P1-202ENST00000449666 945 ntBASIC15.72■□□□□ 0.11
TRAV10A0A0B4J240 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC15.72■□□□□ 0.11
TRAV10A0A0B4J240 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
TRAV10A0A0B4J240 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
TRAV10A0A0B4J240 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRAV10A0A0B4J240 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC15.72■□□□□ 0.11
TRAV10A0A0B4J240 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
TRAV10A0A0B4J240 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRAV10A0A0B4J240 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRAV10A0A0B4J240 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRAV10A0A0B4J240 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRAV10A0A0B4J240 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRAV10A0A0B4J240 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC15.71■□□□□ 0.11
TRAV10A0A0B4J240 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRAV10A0A0B4J240 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRAV10A0A0B4J240 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
TRAV10A0A0B4J240 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRAV10A0A0B4J240 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
TRAV10A0A0B4J240 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC15.71■□□□□ 0.11
TRAV10A0A0B4J240 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRAV10A0A0B4J240 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC15.71■□□□□ 0.11
TRAV10A0A0B4J240 MIR6821-201ENST00000617625 74 ntBASIC15.71■□□□□ 0.11
TRAV10A0A0B4J240 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRAV10A0A0B4J240 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
TRAV10A0A0B4J240 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRAV10A0A0B4J240 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRAV10A0A0B4J240 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRAV10A0A0B4J240 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TRAV10A0A0B4J240 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC15.71■□□□□ 0.11
TRAV10A0A0B4J240 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
TRAV10A0A0B4J240 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.1
TRAV10A0A0B4J240 LINC00543-201ENST00000567234 1845 ntBASIC15.71■□□□□ 0.1
TRAV10A0A0B4J240 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
TRAV10A0A0B4J240 TSPY26P-201ENST00000476365 1326 ntBASIC15.7■□□□□ 0.1
TRAV10A0A0B4J240 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRAV10A0A0B4J240 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
TRAV10A0A0B4J240 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC15.7■□□□□ 0.1
TRAV10A0A0B4J240 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRAV10A0A0B4J240 AK1-201ENST00000223836 736 ntTSL 3 BASIC15.7■□□□□ 0.1
TRAV10A0A0B4J240 AC097381.1-201ENST00000429019 1296 ntBASIC15.7■□□□□ 0.1
TRAV10A0A0B4J240 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC15.7■□□□□ 0.1
TRAV10A0A0B4J240 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC15.7■□□□□ 0.1
TRAV10A0A0B4J240 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC15.7■□□□□ 0.1
TRAV10A0A0B4J240 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRAV10A0A0B4J240 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC15.7■□□□□ 0.1
TRAV10A0A0B4J240 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRAV10A0A0B4J240 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC15.69■□□□□ 0.1
TRAV10A0A0B4J240 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC15.69■□□□□ 0.1
TRAV10A0A0B4J240 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TRAV10A0A0B4J240 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC15.69■□□□□ 0.1
TRAV10A0A0B4J240 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC15.69■□□□□ 0.1
TRAV10A0A0B4J240 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
TRAV10A0A0B4J240 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRAV10A0A0B4J240 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRAV10A0A0B4J240 OR2I1P-207ENST00000453522 948 ntBASIC15.69■□□□□ 0.1
TRAV10A0A0B4J240 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC15.69■□□□□ 0.1
TRAV10A0A0B4J240 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC15.69■□□□□ 0.1
TRAV10A0A0B4J240 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TRAV10A0A0B4J240 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRAV10A0A0B4J240 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRAV10A0A0B4J240 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
TRAV10A0A0B4J240 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TRAV10A0A0B4J240 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC15.68■□□□□ 0.1
TRAV10A0A0B4J240 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRAV10A0A0B4J240 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TRAV10A0A0B4J240 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRAV10A0A0B4J240 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC15.68■□□□□ 0.1
TRAV10A0A0B4J240 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
TRAV10A0A0B4J240 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRAV10A0A0B4J240 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TRAV10A0A0B4J240 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRAV10A0A0B4J240 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRAV10A0A0B4J240 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 17.7 ms