Protein–RNA interactions for Protein: A0A0B4J1X8

IGHV3-43, Immunoglobulin heavy variable 3-43, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-43A0A0B4J1X8 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC18.5■□□□□ 0.55
IGHV3-43A0A0B4J1X8 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
IGHV3-43A0A0B4J1X8 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
IGHV3-43A0A0B4J1X8 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
IGHV3-43A0A0B4J1X8 AC005703.6-201ENST00000623265 1329 ntBASIC18.49■□□□□ 0.55
IGHV3-43A0A0B4J1X8 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC18.49■□□□□ 0.55
IGHV3-43A0A0B4J1X8 COMT-203ENST00000403184 2217 ntTSL 2 BASIC18.49■□□□□ 0.55
IGHV3-43A0A0B4J1X8 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC18.49■□□□□ 0.55
IGHV3-43A0A0B4J1X8 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
IGHV3-43A0A0B4J1X8 Z92544.1-202ENST00000571933 1220 ntBASIC18.49■□□□□ 0.55
IGHV3-43A0A0B4J1X8 MTDHP2-201ENST00000601468 714 ntBASIC18.49■□□□□ 0.55
IGHV3-43A0A0B4J1X8 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
IGHV3-43A0A0B4J1X8 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
IGHV3-43A0A0B4J1X8 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
IGHV3-43A0A0B4J1X8 AL353803.4-201ENST00000565882 1934 ntBASIC18.49■□□□□ 0.55
IGHV3-43A0A0B4J1X8 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC18.49■□□□□ 0.55
IGHV3-43A0A0B4J1X8 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
IGHV3-43A0A0B4J1X8 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
IGHV3-43A0A0B4J1X8 CLTA-206ENST00000466396 695 ntTSL 2 BASIC18.48■□□□□ 0.55
IGHV3-43A0A0B4J1X8 MIR6722-201ENST00000617286 78 ntBASIC18.48■□□□□ 0.55
IGHV3-43A0A0B4J1X8 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
IGHV3-43A0A0B4J1X8 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
IGHV3-43A0A0B4J1X8 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC18.48■□□□□ 0.55
IGHV3-43A0A0B4J1X8 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
IGHV3-43A0A0B4J1X8 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC18.48■□□□□ 0.55
IGHV3-43A0A0B4J1X8 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
IGHV3-43A0A0B4J1X8 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
IGHV3-43A0A0B4J1X8 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC18.48■□□□□ 0.55
IGHV3-43A0A0B4J1X8 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
IGHV3-43A0A0B4J1X8 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
IGHV3-43A0A0B4J1X8 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
IGHV3-43A0A0B4J1X8 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
IGHV3-43A0A0B4J1X8 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
IGHV3-43A0A0B4J1X8 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
IGHV3-43A0A0B4J1X8 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
IGHV3-43A0A0B4J1X8 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
IGHV3-43A0A0B4J1X8 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
IGHV3-43A0A0B4J1X8 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
IGHV3-43A0A0B4J1X8 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC18.47■□□□□ 0.55
IGHV3-43A0A0B4J1X8 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC18.47■□□□□ 0.55
IGHV3-43A0A0B4J1X8 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC18.47■□□□□ 0.55
IGHV3-43A0A0B4J1X8 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
IGHV3-43A0A0B4J1X8 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
IGHV3-43A0A0B4J1X8 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
IGHV3-43A0A0B4J1X8 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
IGHV3-43A0A0B4J1X8 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
IGHV3-43A0A0B4J1X8 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
IGHV3-43A0A0B4J1X8 AC233723.2-201ENST00000623798 2106 ntBASIC18.46■□□□□ 0.55
IGHV3-43A0A0B4J1X8 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
IGHV3-43A0A0B4J1X8 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
IGHV3-43A0A0B4J1X8 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC18.46■□□□□ 0.55
IGHV3-43A0A0B4J1X8 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
IGHV3-43A0A0B4J1X8 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC18.46■□□□□ 0.55
IGHV3-43A0A0B4J1X8 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.54
IGHV3-43A0A0B4J1X8 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
IGHV3-43A0A0B4J1X8 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
IGHV3-43A0A0B4J1X8 TERT-206ENST00000508104 2486 ntTSL 5 BASIC18.45■□□□□ 0.54
IGHV3-43A0A0B4J1X8 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
IGHV3-43A0A0B4J1X8 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC18.45■□□□□ 0.54
IGHV3-43A0A0B4J1X8 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC18.45■□□□□ 0.54
IGHV3-43A0A0B4J1X8 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
IGHV3-43A0A0B4J1X8 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
IGHV3-43A0A0B4J1X8 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
IGHV3-43A0A0B4J1X8 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
IGHV3-43A0A0B4J1X8 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
IGHV3-43A0A0B4J1X8 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
IGHV3-43A0A0B4J1X8 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
IGHV3-43A0A0B4J1X8 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC18.44■□□□□ 0.54
IGHV3-43A0A0B4J1X8 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
IGHV3-43A0A0B4J1X8 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
IGHV3-43A0A0B4J1X8 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
IGHV3-43A0A0B4J1X8 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC18.44■□□□□ 0.54
IGHV3-43A0A0B4J1X8 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC18.44■□□□□ 0.54
IGHV3-43A0A0B4J1X8 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC18.43■□□□□ 0.54
IGHV3-43A0A0B4J1X8 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC18.43■□□□□ 0.54
IGHV3-43A0A0B4J1X8 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC18.43■□□□□ 0.54
IGHV3-43A0A0B4J1X8 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC18.43■□□□□ 0.54
IGHV3-43A0A0B4J1X8 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
IGHV3-43A0A0B4J1X8 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC18.43■□□□□ 0.54
IGHV3-43A0A0B4J1X8 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
IGHV3-43A0A0B4J1X8 CD72-202ENST00000378430 585 ntTSL 3 BASIC18.43■□□□□ 0.54
IGHV3-43A0A0B4J1X8 HES6-204ENST00000409182 863 ntTSL 2 BASIC18.43■□□□□ 0.54
IGHV3-43A0A0B4J1X8 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC18.43■□□□□ 0.54
IGHV3-43A0A0B4J1X8 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
IGHV3-43A0A0B4J1X8 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
IGHV3-43A0A0B4J1X8 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
IGHV3-43A0A0B4J1X8 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
IGHV3-43A0A0B4J1X8 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
IGHV3-43A0A0B4J1X8 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
IGHV3-43A0A0B4J1X8 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
IGHV3-43A0A0B4J1X8 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
IGHV3-43A0A0B4J1X8 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
IGHV3-43A0A0B4J1X8 AC144652.1-201ENST00000609974 1624 ntBASIC18.42■□□□□ 0.54
IGHV3-43A0A0B4J1X8 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
IGHV3-43A0A0B4J1X8 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
IGHV3-43A0A0B4J1X8 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
IGHV3-43A0A0B4J1X8 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
IGHV3-43A0A0B4J1X8 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
IGHV3-43A0A0B4J1X8 AC010997.5-201ENST00000609182 354 ntBASIC18.42■□□□□ 0.54
IGHV3-43A0A0B4J1X8 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms