Protein–RNA interactions for Protein: A0A0A6YYK6

TRAV16, T-cell receptor alpha variable 16 (Fragment), humanhuman

Predicted RBP Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV16A0A0A6YYK6 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC15.47■□□□□ 0.07
TRAV16A0A0A6YYK6 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRAV16A0A0A6YYK6 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC15.47■□□□□ 0.07
TRAV16A0A0A6YYK6 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
TRAV16A0A0A6YYK6 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRAV16A0A0A6YYK6 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRAV16A0A0A6YYK6 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
TRAV16A0A0A6YYK6 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC15.47■□□□□ 0.07
TRAV16A0A0A6YYK6 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRAV16A0A0A6YYK6 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRAV16A0A0A6YYK6 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
TRAV16A0A0A6YYK6 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRAV16A0A0A6YYK6 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
TRAV16A0A0A6YYK6 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
TRAV16A0A0A6YYK6 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
TRAV16A0A0A6YYK6 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
TRAV16A0A0A6YYK6 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TRAV16A0A0A6YYK6 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC15.46■□□□□ 0.07
TRAV16A0A0A6YYK6 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC15.46■□□□□ 0.07
TRAV16A0A0A6YYK6 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC15.46■□□□□ 0.07
TRAV16A0A0A6YYK6 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC15.46■□□□□ 0.07
TRAV16A0A0A6YYK6 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TRAV16A0A0A6YYK6 SPCS2P3-201ENST00000500401 656 ntBASIC15.46■□□□□ 0.07
TRAV16A0A0A6YYK6 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC15.46■□□□□ 0.07
TRAV16A0A0A6YYK6 DUX4L18-201ENST00000553347 1267 ntBASIC15.46■□□□□ 0.07
TRAV16A0A0A6YYK6 AC087393.1-201ENST00000582896 145 ntBASIC15.46■□□□□ 0.07
TRAV16A0A0A6YYK6 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TRAV16A0A0A6YYK6 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TRAV16A0A0A6YYK6 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
TRAV16A0A0A6YYK6 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
TRAV16A0A0A6YYK6 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC15.45■□□□□ 0.06
TRAV16A0A0A6YYK6 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC15.45■□□□□ 0.06
TRAV16A0A0A6YYK6 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRAV16A0A0A6YYK6 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC15.45■□□□□ 0.06
TRAV16A0A0A6YYK6 MYB-221ENST00000527615 2381 ntTSL 5 BASIC15.45■□□□□ 0.06
TRAV16A0A0A6YYK6 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRAV16A0A0A6YYK6 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRAV16A0A0A6YYK6 AC004987.1-201ENST00000428627 508 ntBASIC15.45■□□□□ 0.06
TRAV16A0A0A6YYK6 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
TRAV16A0A0A6YYK6 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC15.45■□□□□ 0.06
TRAV16A0A0A6YYK6 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
TRAV16A0A0A6YYK6 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC15.45■□□□□ 0.06
TRAV16A0A0A6YYK6 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC15.45■□□□□ 0.06
TRAV16A0A0A6YYK6 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
TRAV16A0A0A6YYK6 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC15.45■□□□□ 0.06
TRAV16A0A0A6YYK6 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
TRAV16A0A0A6YYK6 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC15.45■□□□□ 0.06
TRAV16A0A0A6YYK6 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC15.45■□□□□ 0.06
TRAV16A0A0A6YYK6 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
TRAV16A0A0A6YYK6 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
TRAV16A0A0A6YYK6 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC15.45■□□□□ 0.06
TRAV16A0A0A6YYK6 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC15.44■□□□□ 0.06
TRAV16A0A0A6YYK6 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC15.44■□□□□ 0.06
TRAV16A0A0A6YYK6 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRAV16A0A0A6YYK6 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC15.44■□□□□ 0.06
TRAV16A0A0A6YYK6 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
TRAV16A0A0A6YYK6 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC15.44■□□□□ 0.06
TRAV16A0A0A6YYK6 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRAV16A0A0A6YYK6 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRAV16A0A0A6YYK6 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRAV16A0A0A6YYK6 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
TRAV16A0A0A6YYK6 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
TRAV16A0A0A6YYK6 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRAV16A0A0A6YYK6 AC138932.1-201ENST00000534164 6830 ntBASIC15.43■□□□□ 0.06
TRAV16A0A0A6YYK6 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
TRAV16A0A0A6YYK6 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
TRAV16A0A0A6YYK6 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
TRAV16A0A0A6YYK6 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRAV16A0A0A6YYK6 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC15.43■□□□□ 0.06
TRAV16A0A0A6YYK6 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRAV16A0A0A6YYK6 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC15.43■□□□□ 0.06
TRAV16A0A0A6YYK6 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC15.43■□□□□ 0.06
TRAV16A0A0A6YYK6 MTX2-204ENST00000443241 799 ntTSL 3 BASIC15.43■□□□□ 0.06
TRAV16A0A0A6YYK6 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
TRAV16A0A0A6YYK6 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC15.43■□□□□ 0.06
TRAV16A0A0A6YYK6 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC15.43■□□□□ 0.06
TRAV16A0A0A6YYK6 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRAV16A0A0A6YYK6 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC15.43■□□□□ 0.06
TRAV16A0A0A6YYK6 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRAV16A0A0A6YYK6 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
TRAV16A0A0A6YYK6 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRAV16A0A0A6YYK6 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC15.43■□□□□ 0.06
TRAV16A0A0A6YYK6 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRAV16A0A0A6YYK6 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRAV16A0A0A6YYK6 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRAV16A0A0A6YYK6 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC15.42■□□□□ 0.06
TRAV16A0A0A6YYK6 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
TRAV16A0A0A6YYK6 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRAV16A0A0A6YYK6 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRAV16A0A0A6YYK6 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
TRAV16A0A0A6YYK6 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
TRAV16A0A0A6YYK6 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRAV16A0A0A6YYK6 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRAV16A0A0A6YYK6 AL137060.1-201ENST00000618151 2648 ntBASIC15.42■□□□□ 0.06
TRAV16A0A0A6YYK6 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC15.42■□□□□ 0.06
TRAV16A0A0A6YYK6 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
TRAV16A0A0A6YYK6 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC15.42■□□□□ 0.06
TRAV16A0A0A6YYK6 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRAV16A0A0A6YYK6 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
TRAV16A0A0A6YYK6 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC15.42■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms