Protein–RNA interactions for Protein: A0A0A6YYJ7

TRAV8-3, T-cell receptor alpha variable 8-3 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-3A0A0A6YYJ7 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC15.73■□□□□ 0.11
TRAV8-3A0A0A6YYJ7 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRAV8-3A0A0A6YYJ7 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRAV8-3A0A0A6YYJ7 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRAV8-3A0A0A6YYJ7 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
TRAV8-3A0A0A6YYJ7 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRAV8-3A0A0A6YYJ7 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
TRAV8-3A0A0A6YYJ7 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
TRAV8-3A0A0A6YYJ7 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRAV8-3A0A0A6YYJ7 RARRES2P1-201ENST00000474487 481 ntBASIC15.72■□□□□ 0.11
TRAV8-3A0A0A6YYJ7 AC120024.1-201ENST00000562672 995 ntBASIC15.72■□□□□ 0.11
TRAV8-3A0A0A6YYJ7 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
TRAV8-3A0A0A6YYJ7 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRAV8-3A0A0A6YYJ7 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
TRAV8-3A0A0A6YYJ7 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRAV8-3A0A0A6YYJ7 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRAV8-3A0A0A6YYJ7 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
TRAV8-3A0A0A6YYJ7 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRAV8-3A0A0A6YYJ7 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRAV8-3A0A0A6YYJ7 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRAV8-3A0A0A6YYJ7 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC15.71■□□□□ 0.11
TRAV8-3A0A0A6YYJ7 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRAV8-3A0A0A6YYJ7 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRAV8-3A0A0A6YYJ7 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
TRAV8-3A0A0A6YYJ7 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TRAV8-3A0A0A6YYJ7 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRAV8-3A0A0A6YYJ7 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC15.71■□□□□ 0.11
TRAV8-3A0A0A6YYJ7 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC15.71■□□□□ 0.11
TRAV8-3A0A0A6YYJ7 AC103724.3-201ENST00000564481 992 ntBASIC15.71■□□□□ 0.11
TRAV8-3A0A0A6YYJ7 TK2-216ENST00000564917 1156 ntTSL 3 BASIC15.71■□□□□ 0.11
TRAV8-3A0A0A6YYJ7 GAK-223ENST00000628912 497 ntTSL 5 BASIC15.71■□□□□ 0.11
TRAV8-3A0A0A6YYJ7 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TRAV8-3A0A0A6YYJ7 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRAV8-3A0A0A6YYJ7 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TRAV8-3A0A0A6YYJ7 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRAV8-3A0A0A6YYJ7 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
TRAV8-3A0A0A6YYJ7 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRAV8-3A0A0A6YYJ7 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC15.71■□□□□ 0.11
TRAV8-3A0A0A6YYJ7 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRAV8-3A0A0A6YYJ7 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
TRAV8-3A0A0A6YYJ7 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
TRAV8-3A0A0A6YYJ7 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TRAV8-3A0A0A6YYJ7 USP48-205ENST00000421625 2818 ntTSL 2 BASIC15.7■□□□□ 0.1
TRAV8-3A0A0A6YYJ7 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRAV8-3A0A0A6YYJ7 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRAV8-3A0A0A6YYJ7 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
TRAV8-3A0A0A6YYJ7 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRAV8-3A0A0A6YYJ7 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRAV8-3A0A0A6YYJ7 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC15.7■□□□□ 0.1
TRAV8-3A0A0A6YYJ7 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC15.7■□□□□ 0.1
TRAV8-3A0A0A6YYJ7 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRAV8-3A0A0A6YYJ7 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
TRAV8-3A0A0A6YYJ7 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRAV8-3A0A0A6YYJ7 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC15.69■□□□□ 0.1
TRAV8-3A0A0A6YYJ7 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC15.69■□□□□ 0.1
TRAV8-3A0A0A6YYJ7 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC15.69■□□□□ 0.1
TRAV8-3A0A0A6YYJ7 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC15.69■□□□□ 0.1
TRAV8-3A0A0A6YYJ7 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TRAV8-3A0A0A6YYJ7 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TRAV8-3A0A0A6YYJ7 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC15.69■□□□□ 0.1
TRAV8-3A0A0A6YYJ7 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRAV8-3A0A0A6YYJ7 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRAV8-3A0A0A6YYJ7 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRAV8-3A0A0A6YYJ7 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRAV8-3A0A0A6YYJ7 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
TRAV8-3A0A0A6YYJ7 ANOS2P-203ENST00000472227 1816 ntBASIC15.68■□□□□ 0.1
TRAV8-3A0A0A6YYJ7 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRAV8-3A0A0A6YYJ7 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
TRAV8-3A0A0A6YYJ7 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRAV8-3A0A0A6YYJ7 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC15.68■□□□□ 0.1
TRAV8-3A0A0A6YYJ7 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRAV8-3A0A0A6YYJ7 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRAV8-3A0A0A6YYJ7 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
TRAV8-3A0A0A6YYJ7 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TRAV8-3A0A0A6YYJ7 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRAV8-3A0A0A6YYJ7 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC15.68■□□□□ 0.1
TRAV8-3A0A0A6YYJ7 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC15.68■□□□□ 0.1
TRAV8-3A0A0A6YYJ7 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRAV8-3A0A0A6YYJ7 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC15.68■□□□□ 0.1
TRAV8-3A0A0A6YYJ7 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRAV8-3A0A0A6YYJ7 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
TRAV8-3A0A0A6YYJ7 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC15.67■□□□□ 0.1
TRAV8-3A0A0A6YYJ7 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRAV8-3A0A0A6YYJ7 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TRAV8-3A0A0A6YYJ7 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TRAV8-3A0A0A6YYJ7 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC15.67■□□□□ 0.1
TRAV8-3A0A0A6YYJ7 LINC00526-201ENST00000581067 1875 ntBASIC15.67■□□□□ 0.1
TRAV8-3A0A0A6YYJ7 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TRAV8-3A0A0A6YYJ7 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRAV8-3A0A0A6YYJ7 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRAV8-3A0A0A6YYJ7 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRAV8-3A0A0A6YYJ7 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
TRAV8-3A0A0A6YYJ7 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TRAV8-3A0A0A6YYJ7 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
TRAV8-3A0A0A6YYJ7 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRAV8-3A0A0A6YYJ7 GUSBP5-202ENST00000510805 1989 ntBASIC15.67■□□□□ 0.1
TRAV8-3A0A0A6YYJ7 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
TRAV8-3A0A0A6YYJ7 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TRAV8-3A0A0A6YYJ7 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TRAV8-3A0A0A6YYJ7 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 15.1 ms