Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 CARD10-203ENST00000406271 3127 ntTSL 2 BASIC13.44□□□□□ -0.26
CUEDC1Q9NWM3 PPFIA4-204ENST00000447715 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
CUEDC1Q9NWM3 C19orf57-204ENST00000586783 2454 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
CUEDC1Q9NWM3 UBA5-202ENST00000356232 3705 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CUEDC1Q9NWM3 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
CUEDC1Q9NWM3 ZNF275-201ENST00000370249 5920 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CUEDC1Q9NWM3 ABCG2-201ENST00000237612 4479 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CUEDC1Q9NWM3 ZC2HC1A-201ENST00000263849 3352 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CUEDC1Q9NWM3 REC8-213ENST00000620473 2405 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
CUEDC1Q9NWM3 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CUEDC1Q9NWM3 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
CUEDC1Q9NWM3 EPM2A-218ENST00000639465 2203 ntTSL 5 BASIC13.43□□□□□ -0.26
CUEDC1Q9NWM3 GGA1-201ENST00000325180 2528 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CUEDC1Q9NWM3 PPP4R3B-205ENST00000616288 4310 ntAPPRIS ALT1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CUEDC1Q9NWM3 HIPK3-202ENST00000379016 7345 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CUEDC1Q9NWM3 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CUEDC1Q9NWM3 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CUEDC1Q9NWM3 CPPED1-201ENST00000261660 1898 ntTSL 2 BASIC13.43□□□□□ -0.26
CUEDC1Q9NWM3 SSTR1-201ENST00000267377 4295 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
CUEDC1Q9NWM3 MORN4-201ENST00000307450 2315 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CUEDC1Q9NWM3 ZDHHC4-201ENST00000335965 1259 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CUEDC1Q9NWM3 BCL2L11-202ENST00000337565 720 ntTSL 5 BASIC13.43□□□□□ -0.26
CUEDC1Q9NWM3 Metazoa_SRP.9-201ENST00000415635 283 ntBASIC13.43□□□□□ -0.26
CUEDC1Q9NWM3 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC13.43□□□□□ -0.26
CUEDC1Q9NWM3 AL592076.1-201ENST00000424448 303 ntBASIC13.43□□□□□ -0.26
CUEDC1Q9NWM3 NSD2-209ENST00000436793 835 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CUEDC1Q9NWM3 AL356218.1-201ENST00000450864 353 ntTSL 3 BASIC13.43□□□□□ -0.26
CUEDC1Q9NWM3 GOSR1-204ENST00000451249 1231 ntAPPRIS ALT1 TSL 2 BASIC13.43□□□□□ -0.26
CUEDC1Q9NWM3 FBXO24-204ENST00000465843 957 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CUEDC1Q9NWM3 RGS8-204ENST00000483095 1432 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
CUEDC1Q9NWM3 GOLGA8K-202ENST00000512626 1894 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
CUEDC1Q9NWM3 PTK2-225ENST00000520892 571 ntTSL 4 BASIC13.43□□□□□ -0.26
CUEDC1Q9NWM3 EMC4-208ENST00000559078 599 ntTSL 3 BASIC13.43□□□□□ -0.26
CUEDC1Q9NWM3 GOLGA8T-202ENST00000569052 1896 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
CUEDC1Q9NWM3 JPT2-214ENST00000569765 782 ntTSL 2 BASIC13.43□□□□□ -0.26
CUEDC1Q9NWM3 AC015917.2-201ENST00000580714 493 ntTSL 3 BASIC13.43□□□□□ -0.26
CUEDC1Q9NWM3 AC079336.4-201ENST00000584219 408 ntTSL 2 BASIC13.43□□□□□ -0.26
CUEDC1Q9NWM3 HPX-213ENST00000615166 826 ntTSL 5 BASIC13.43□□□□□ -0.26
CUEDC1Q9NWM3 CBR3-AS1-213ENST00000623647 815 ntTSL 5 BASIC13.43□□□□□ -0.26
CUEDC1Q9NWM3 PPP3CA-202ENST00000394853 3604 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CUEDC1Q9NWM3 ACO1-203ENST00000541043 3618 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
CUEDC1Q9NWM3 PRKAR2A-202ENST00000296446 3318 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CUEDC1Q9NWM3 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CUEDC1Q9NWM3 STRC-205ENST00000450892 5680 ntAPPRIS P2 TSL 5 BASIC13.43□□□□□ -0.26
CUEDC1Q9NWM3 GP6-201ENST00000310373 2268 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
CUEDC1Q9NWM3 C19orf66-202ENST00000397881 2140 ntAPPRIS ALT2 TSL 2 BASIC13.43□□□□□ -0.26
CUEDC1Q9NWM3 PTK7-205ENST00000352931 4023 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CUEDC1Q9NWM3 APOBEC3D-202ENST00000427494 1961 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CUEDC1Q9NWM3 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC13.43□□□□□ -0.26
CUEDC1Q9NWM3 RBFADN-204ENST00000568911 5187 ntTSL 2 BASIC13.43□□□□□ -0.26
CUEDC1Q9NWM3 KLK6-201ENST00000310157 1511 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CUEDC1Q9NWM3 CAMKK2-204ENST00000392473 2967 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
CUEDC1Q9NWM3 TNFRSF11A-205ENST00000616710 3809 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
CUEDC1Q9NWM3 RGS9-201ENST00000262406 2375 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
CUEDC1Q9NWM3 PCMTD2-204ENST00000369758 3212 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CUEDC1Q9NWM3 PNPLA6-201ENST00000221249 4617 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CUEDC1Q9NWM3 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CUEDC1Q9NWM3 WDR81-205ENST00000437219 3184 ntTSL 2 BASIC13.42□□□□□ -0.26
CUEDC1Q9NWM3 NXF1-201ENST00000294172 2346 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CUEDC1Q9NWM3 DCAF10-202ENST00000377724 3862 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CUEDC1Q9NWM3 AC074138.1-201ENST00000611182 1303 ntBASIC13.42□□□□□ -0.26
CUEDC1Q9NWM3 CFAP74-209ENST00000493964 5247 ntAPPRIS P5 TSL 5 BASIC13.42□□□□□ -0.26
CUEDC1Q9NWM3 AC073548.1-201ENST00000624088 1882 ntBASIC13.42□□□□□ -0.26
CUEDC1Q9NWM3 AAR2-201ENST00000320849 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CUEDC1Q9NWM3 HECTD1-203ENST00000553700 9080 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
CUEDC1Q9NWM3 ACP7-201ENST00000331256 2966 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
CUEDC1Q9NWM3 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CUEDC1Q9NWM3 ACTN4-203ENST00000424234 1566 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
CUEDC1Q9NWM3 AC113189.2-201ENST00000575310 1975 ntTSL 2 BASIC13.42□□□□□ -0.26
CUEDC1Q9NWM3 KCNV1-201ENST00000297404 2927 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CUEDC1Q9NWM3 TRPV6-201ENST00000359396 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
CUEDC1Q9NWM3 PAG1-201ENST00000220597 10744 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
CUEDC1Q9NWM3 NOTCH1-201ENST00000277541 9371 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CUEDC1Q9NWM3 EDEM3-202ENST00000367512 6678 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
CUEDC1Q9NWM3 DLX1-203ENST00000361725 2640 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CUEDC1Q9NWM3 SHPK-201ENST00000225519 3838 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CUEDC1Q9NWM3 PYY2-201ENST00000315776 282 ntBASIC13.42□□□□□ -0.26
CUEDC1Q9NWM3 HNRNPA1-201ENST00000330752 1294 ntTSL 5 BASIC13.42□□□□□ -0.26
CUEDC1Q9NWM3 CRYBB3-202ENST00000404334 601 ntTSL 3 BASIC13.42□□□□□ -0.26
CUEDC1Q9NWM3 SNORA50C-201ENST00000408535 133 ntBASIC13.42□□□□□ -0.26
CUEDC1Q9NWM3 SERF2-206ENST00000409291 807 ntTSL 3 BASIC13.42□□□□□ -0.26
CUEDC1Q9NWM3 ORMDL1-204ENST00000409519 1223 ntTSL 3 BASIC13.42□□□□□ -0.26
CUEDC1Q9NWM3 RPL3P2-204ENST00000413027 1203 ntBASIC13.42□□□□□ -0.26
CUEDC1Q9NWM3 AC005722.1-201ENST00000431878 964 ntBASIC13.42□□□□□ -0.26
CUEDC1Q9NWM3 AL512306.1-201ENST00000432698 848 ntBASIC13.42□□□□□ -0.26
CUEDC1Q9NWM3 AC079112.1-201ENST00000454972 939 ntBASIC13.42□□□□□ -0.26
CUEDC1Q9NWM3 SCARNA12-201ENST00000459155 270 ntBASIC13.42□□□□□ -0.26
CUEDC1Q9NWM3 AC133961.1-201ENST00000503085 762 ntTSL 3 BASIC13.42□□□□□ -0.26
CUEDC1Q9NWM3 MRPL22P1-201ENST00000505398 616 ntBASIC13.42□□□□□ -0.26
CUEDC1Q9NWM3 APOC1P1-201ENST00000507983 630 ntTSL 4 BASIC13.42□□□□□ -0.26
CUEDC1Q9NWM3 TMEM218-205ENST00000527271 706 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
CUEDC1Q9NWM3 AP002803.1-201ENST00000528836 498 ntBASIC13.42□□□□□ -0.26
CUEDC1Q9NWM3 AC025154.2-202ENST00000552379 592 ntTSL 3 BASIC13.42□□□□□ -0.26
CUEDC1Q9NWM3 C12orf73-210ENST00000552940 685 ntTSL 2 BASIC13.42□□□□□ -0.26
CUEDC1Q9NWM3 AC132825.4-202ENST00000578792 434 ntBASIC13.42□□□□□ -0.26
CUEDC1Q9NWM3 MIR4265-201ENST00000582152 99 ntBASIC13.42□□□□□ -0.26
CUEDC1Q9NWM3 GHRHR-212ENST00000611037 923 ntTSL 5 BASIC13.42□□□□□ -0.26
CUEDC1Q9NWM3 HIST1H3C-201ENST00000612966 411 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
CUEDC1Q9NWM3 SNORA50.1-201ENST00000628590 135 ntBASIC13.42□□□□□ -0.26
CUEDC1Q9NWM3 VASH1-AS1-202ENST00000556072 1684 ntTSL 2 BASIC13.42□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms