Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
HPS1Q92902 AC092028.1-202ENST00000641483 3547 ntBASIC12.86□□□□□ -0.35
HPS1Q92902 AC092028.1-201ENST00000641781 3540 ntBASIC12.86□□□□□ -0.35
HPS1Q92902 FAM198B-207ENST00000592057 3425 ntTSL 2 BASIC12.86□□□□□ -0.35
HPS1Q92902 CACNB4-210ENST00000539935 8378 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
HPS1Q92902 PNMA5-203ENST00000439251 3213 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
HPS1Q92902 PI4KAP2-201ENST00000360806 2080 ntBASIC12.86□□□□□ -0.35
HPS1Q92902 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
HPS1Q92902 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
HPS1Q92902 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
HPS1Q92902 RNU1-114P-201ENST00000365297 166 ntBASIC12.86□□□□□ -0.35
HPS1Q92902 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC12.86□□□□□ -0.35
HPS1Q92902 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC12.86□□□□□ -0.35
HPS1Q92902 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC12.86□□□□□ -0.35
HPS1Q92902 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
HPS1Q92902 AL133247.1-201ENST00000435713 646 ntTSL 3 BASIC12.86□□□□□ -0.35
HPS1Q92902 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC12.86□□□□□ -0.35
HPS1Q92902 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
HPS1Q92902 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC12.86□□□□□ -0.35
HPS1Q92902 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC12.86□□□□□ -0.35
HPS1Q92902 MTND2P31-201ENST00000512602 616 ntBASIC12.86□□□□□ -0.35
HPS1Q92902 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
HPS1Q92902 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC12.86□□□□□ -0.35
HPS1Q92902 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC12.86□□□□□ -0.35
HPS1Q92902 AC009268.1-201ENST00000561352 1203 ntBASIC12.86□□□□□ -0.35
HPS1Q92902 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC12.86□□□□□ -0.35
HPS1Q92902 AP000842.3-201ENST00000564354 808 ntTSL 3 BASIC12.86□□□□□ -0.35
HPS1Q92902 AC103810.3-201ENST00000583567 96 ntBASIC12.86□□□□□ -0.35
HPS1Q92902 PSMG2-210ENST00000590217 1036 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
HPS1Q92902 AC025165.5-201ENST00000602802 578 ntBASIC12.86□□□□□ -0.35
HPS1Q92902 AC006963.1-201ENST00000624003 1052 ntBASIC12.86□□□□□ -0.35
HPS1Q92902 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC12.86□□□□□ -0.35
HPS1Q92902 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC12.86□□□□□ -0.35
HPS1Q92902 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC12.86□□□□□ -0.35
HPS1Q92902 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC12.86□□□□□ -0.35
HPS1Q92902 MVP-202ENST00000395353 2925 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
HPS1Q92902 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
HPS1Q92902 HADHB-209ENST00000545822 1870 ntTSL 5 BASIC12.86□□□□□ -0.35
HPS1Q92902 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
HPS1Q92902 IP6K1-202ENST00000395238 4117 ntTSL 3 BASIC12.86□□□□□ -0.35
HPS1Q92902 SEPT10-202ENST00000397712 3071 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
HPS1Q92902 SIAE-201ENST00000263593 5583 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
HPS1Q92902 SGK3-208ENST00000521198 3306 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
HPS1Q92902 AC126564.1-201ENST00000623628 2013 ntBASIC12.86□□□□□ -0.35
HPS1Q92902 ZNF140-202ENST00000355557 3550 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
HPS1Q92902 GTF2I-215ENST00000614986 4415 ntAPPRIS ALT1 TSL 1 (best) BASIC12.86□□□□□ -0.35
HPS1Q92902 GTF2I-221ENST00000621734 4412 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
HPS1Q92902 KLHL32-206ENST00000544166 2864 ntTSL 2 BASIC12.86□□□□□ -0.35
HPS1Q92902 ARAP3-207ENST00000626478 4928 ntTSL 5 BASIC12.86□□□□□ -0.35
HPS1Q92902 GOLGA3-201ENST00000204726 9252 ntAPPRIS P3 TSL 5 BASIC12.86□□□□□ -0.35
HPS1Q92902 STK11IP-204ENST00000456909 3615 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
HPS1Q92902 UQCRB-201ENST00000287022 5575 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
HPS1Q92902 RNF219-AS1-209ENST00000606429 2418 ntTSL 2 BASIC12.86□□□□□ -0.35
HPS1Q92902 AC010970.1-201ENST00000445125 1848 ntBASIC12.85□□□□□ -0.35
HPS1Q92902 CLINT1-201ENST00000411809 3440 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
HPS1Q92902 NXF1-201ENST00000294172 2346 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
HPS1Q92902 ADGRL1-201ENST00000340736 7853 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
HPS1Q92902 MSTO2P-201ENST00000314835 1709 ntBASIC12.85□□□□□ -0.35
HPS1Q92902 ATE1-208ENST00000540606 5165 ntTSL 2 BASIC12.85□□□□□ -0.35
HPS1Q92902 PARP3-202ENST00000417220 2472 ntAPPRIS P3 TSL 5 BASIC12.85□□□□□ -0.35
HPS1Q92902 NEK4-207ENST00000535191 2452 ntTSL 2 BASIC12.85□□□□□ -0.35
HPS1Q92902 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
HPS1Q92902 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
HPS1Q92902 FGF10-AS1-201ENST00000502457 1894 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
HPS1Q92902 HNRNPH1-216ENST00000510411 2105 ntTSL 5 BASIC12.85□□□□□ -0.35
HPS1Q92902 KCNMA1-265ENST00000639591 3888 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
HPS1Q92902 FAM156B-201ENST00000416841 2537 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
HPS1Q92902 JAM3-201ENST00000299106 3912 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
HPS1Q92902 TBC1D22A-203ENST00000380995 3934 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
HPS1Q92902 BAIAP3-204ENST00000426824 3930 ntAPPRIS ALT2 TSL 2 BASIC12.85□□□□□ -0.35
HPS1Q92902 AKAP8-201ENST00000269701 3670 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
HPS1Q92902 ARPP21-213ENST00000428373 3150 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
HPS1Q92902 WDR27-203ENST00000448612 3178 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
HPS1Q92902 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC12.85□□□□□ -0.35
HPS1Q92902 AGFG1-204ENST00000409315 2912 ntTSL 5 BASIC12.85□□□□□ -0.35
HPS1Q92902 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
HPS1Q92902 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC12.85□□□□□ -0.35
HPS1Q92902 AC006001.1-201ENST00000325130 474 ntBASIC12.85□□□□□ -0.35
HPS1Q92902 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
HPS1Q92902 CENPW-203ENST00000368328 750 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
HPS1Q92902 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC12.85□□□□□ -0.35
HPS1Q92902 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC12.85□□□□□ -0.35
HPS1Q92902 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
HPS1Q92902 TPO-206ENST00000382269 1155 ntTSL 5 BASIC12.85□□□□□ -0.35
HPS1Q92902 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
HPS1Q92902 CD8B2-202ENST00000417670 633 ntBASIC12.85□□□□□ -0.35
HPS1Q92902 AC016730.1-201ENST00000420828 832 ntTSL 2 BASIC12.85□□□□□ -0.35
HPS1Q92902 AC026954.1-201ENST00000429771 1293 ntBASIC12.85□□□□□ -0.35
HPS1Q92902 AC003958.1-201ENST00000435883 421 ntBASIC12.85□□□□□ -0.35
HPS1Q92902 AC012454.1-201ENST00000443948 995 ntBASIC12.85□□□□□ -0.35
HPS1Q92902 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC12.85□□□□□ -0.35
HPS1Q92902 KDELR2-206ENST00000490996 655 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
HPS1Q92902 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
HPS1Q92902 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC12.85□□□□□ -0.35
HPS1Q92902 MEG8-217ENST00000556637 924 ntTSL 5 BASIC12.85□□□□□ -0.35
HPS1Q92902 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
HPS1Q92902 RN7SL560P-201ENST00000577943 264 ntBASIC12.85□□□□□ -0.35
HPS1Q92902 AP001793.2-201ENST00000580267 780 ntTSL 2 BASIC12.85□□□□□ -0.35
HPS1Q92902 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC12.85□□□□□ -0.35
HPS1Q92902 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC12.85□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms