Protein–RNA interactions for Protein: Q8WXD2

SCG3, Secretogranin-3, humanhuman

Known RBP Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCG3Q8WXD2 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SCG3Q8WXD2 SLC8A2-203ENST00000542837 3603 ntTSL 2 BASIC14.26□□□□□ -0.13
SCG3Q8WXD2 NADK-202ENST00000341991 3098 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
SCG3Q8WXD2 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC14.25□□□□□ -0.13
SCG3Q8WXD2 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC14.25□□□□□ -0.13
SCG3Q8WXD2 MAP4-204ENST00000395734 5590 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
SCG3Q8WXD2 CFAP43-201ENST00000278064 2963 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SCG3Q8WXD2 ATAT1-206ENST00000376485 1476 ntAPPRIS ALT1 TSL 5 BASIC14.25□□□□□ -0.13
SCG3Q8WXD2 DSCAML1-203ENST00000527706 6099 ntTSL 5 BASIC14.25□□□□□ -0.13
SCG3Q8WXD2 NLRX1-201ENST00000292199 3744 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SCG3Q8WXD2 BCL2-201ENST00000333681 3209 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SCG3Q8WXD2 JOSD1-201ENST00000216039 3648 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SCG3Q8WXD2 RIN3-212ENST00000620541 3617 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
SCG3Q8WXD2 YWHAQ-201ENST00000238081 2208 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SCG3Q8WXD2 CLTCL1-212ENST00000622493 1714 ntTSL 2 BASIC14.25□□□□□ -0.13
SCG3Q8WXD2 AC018629.1-201ENST00000623381 1736 ntBASIC14.25□□□□□ -0.13
SCG3Q8WXD2 B9D1-202ENST00000268841 755 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SCG3Q8WXD2 DPCD-202ENST00000370151 858 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SCG3Q8WXD2 GAD1-203ENST00000375272 1252 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SCG3Q8WXD2 DMAC2-203ENST00000417807 1065 ntTSL 2 BASIC14.25□□□□□ -0.13
SCG3Q8WXD2 LINC01006-202ENST00000418309 640 ntTSL 3 BASIC14.25□□□□□ -0.13
SCG3Q8WXD2 AL391832.2-201ENST00000418557 889 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SCG3Q8WXD2 Z82214.1-201ENST00000419643 988 ntTSL 3 BASIC14.25□□□□□ -0.13
SCG3Q8WXD2 AC083949.1-201ENST00000422013 657 ntTSL 3 BASIC14.25□□□□□ -0.13
SCG3Q8WXD2 AP000356.1-201ENST00000438893 364 ntTSL 3 BASIC14.25□□□□□ -0.13
SCG3Q8WXD2 FKBP11-202ENST00000444214 630 ntTSL 2 BASIC14.25□□□□□ -0.13
SCG3Q8WXD2 GATD1-205ENST00000524550 995 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SCG3Q8WXD2 SIRT3-210ENST00000529382 1225 ntTSL 2 BASIC14.25□□□□□ -0.13
SCG3Q8WXD2 AP001160.1-201ENST00000535817 565 ntTSL 3 BASIC14.25□□□□□ -0.13
SCG3Q8WXD2 AC015660.1-201ENST00000560103 395 ntTSL 3 BASIC14.25□□□□□ -0.13
SCG3Q8WXD2 STUB1-204ENST00000564370 875 ntTSL 2 BASIC14.25□□□□□ -0.13
SCG3Q8WXD2 TMEM231-206ENST00000565067 1078 ntTSL 5 BASIC14.25□□□□□ -0.13
SCG3Q8WXD2 LINC01229-204ENST00000568751 720 ntTSL 3 BASIC14.25□□□□□ -0.13
SCG3Q8WXD2 CEP95-212ENST00000581056 903 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
SCG3Q8WXD2 NAT9-220ENST00000582870 896 ntTSL 5 BASIC14.25□□□□□ -0.13
SCG3Q8WXD2 AC011498.6-201ENST00000592034 510 ntTSL 5 BASIC14.25□□□□□ -0.13
SCG3Q8WXD2 CUTA-215ENST00000611509 1199 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
SCG3Q8WXD2 AF254983.2-201ENST00000612331 135 ntBASIC14.25□□□□□ -0.13
SCG3Q8WXD2 AC092299.1-201ENST00000632679 757 ntBASIC14.25□□□□□ -0.13
SCG3Q8WXD2 GLIDR-205ENST00000640674 884 ntTSL 5 BASIC14.25□□□□□ -0.13
SCG3Q8WXD2 C17orf53-203ENST00000585683 2529 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
SCG3Q8WXD2 SLC38A6-201ENST00000267488 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SCG3Q8WXD2 ABI2-215ENST00000430418 1676 ntTSL 5 BASIC14.25□□□□□ -0.13
SCG3Q8WXD2 C10orf88-204ENST00000481909 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SCG3Q8WXD2 RFFL-201ENST00000315249 7293 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
SCG3Q8WXD2 ZBTB20-206ENST00000464560 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SCG3Q8WXD2 SLC35G2-201ENST00000393079 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SCG3Q8WXD2 OR2C3-204ENST00000641802 8509 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
SCG3Q8WXD2 PNKD-203ENST00000273077 3021 ntAPPRIS P4 TSL 1 (best) BASIC14.25□□□□□ -0.13
SCG3Q8WXD2 PPP2R1B-204ENST00000426998 1888 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
SCG3Q8WXD2 STAG3-206ENST00000426455 4450 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
SCG3Q8WXD2 NEK4-202ENST00000383721 2576 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
SCG3Q8WXD2 ABCB8-202ENST00000358849 4683 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SCG3Q8WXD2 TNNI1-201ENST00000336092 1750 ntAPPRIS P2 TSL 5 BASIC14.24□□□□□ -0.13
SCG3Q8WXD2 AC021683.1-201ENST00000585798 1767 ntTSL 5 BASIC14.24□□□□□ -0.13
SCG3Q8WXD2 SECISBP2-202ENST00000375807 3462 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SCG3Q8WXD2 SPIN3-245ENST00000640768 1722 ntTSL 5 BASIC14.24□□□□□ -0.13
SCG3Q8WXD2 POLR3K-201ENST00000293860 1392 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SCG3Q8WXD2 CFAP36-201ENST00000339012 1373 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SCG3Q8WXD2 AGER-201ENST00000375055 1369 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SCG3Q8WXD2 SLC35B2-206ENST00000615337 2014 ntTSL 4 BASIC14.24□□□□□ -0.13
SCG3Q8WXD2 TUBB4AP1-201ENST00000450755 1325 ntBASIC14.24□□□□□ -0.13
SCG3Q8WXD2 KRT18P9-201ENST00000604826 1300 ntBASIC14.24□□□□□ -0.13
SCG3Q8WXD2 GPRC5B-209ENST00000569479 2984 ntAPPRIS P2 TSL 5 BASIC14.24□□□□□ -0.13
SCG3Q8WXD2 PCDHB10-201ENST00000239446 3290 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
SCG3Q8WXD2 CCDC117-205ENST00000448492 3937 ntTSL 2 BASIC14.24□□□□□ -0.13
SCG3Q8WXD2 ZNF174-201ENST00000268655 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SCG3Q8WXD2 REV3L-207ENST00000435970 10943 ntTSL 2 BASIC14.24□□□□□ -0.13
SCG3Q8WXD2 RPS16-202ENST00000339471 643 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SCG3Q8WXD2 CMTM5-203ENST00000359320 1200 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SCG3Q8WXD2 LCMT1-202ENST00000380966 989 ntTSL 2 BASIC14.24□□□□□ -0.13
SCG3Q8WXD2 IGHV3-21-201ENST00000390607 430 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
SCG3Q8WXD2 AL627231.1-201ENST00000394467 1125 ntBASIC14.24□□□□□ -0.13
SCG3Q8WXD2 SF3B1-204ENST00000414963 651 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SCG3Q8WXD2 TMEM243-202ENST00000423734 601 ntTSL 2 BASIC14.24□□□□□ -0.13
SCG3Q8WXD2 AC092580.1-201ENST00000433998 658 ntBASIC14.24□□□□□ -0.13
SCG3Q8WXD2 AC093151.3-202ENST00000445073 709 ntTSL 3 BASIC14.24□□□□□ -0.13
SCG3Q8WXD2 CEP164P1-201ENST00000455142 418 ntBASIC14.24□□□□□ -0.13
SCG3Q8WXD2 RPS2P36-201ENST00000456516 831 ntBASIC14.24□□□□□ -0.13
SCG3Q8WXD2 AC135178.1-201ENST00000458568 537 ntTSL 3 BASIC14.24□□□□□ -0.13
SCG3Q8WXD2 UPK1B-205ENST00000497685 981 ntTSL 2 BASIC14.24□□□□□ -0.13
SCG3Q8WXD2 GOLGA2P8-201ENST00000505201 779 ntBASIC14.24□□□□□ -0.13
SCG3Q8WXD2 WSPAR-201ENST00000513561 683 ntTSL 3 BASIC14.24□□□□□ -0.13
SCG3Q8WXD2 ANP32A-210ENST00000560303 724 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
SCG3Q8WXD2 TPM1-223ENST00000560445 485 ntTSL 3 BASIC14.24□□□□□ -0.13
SCG3Q8WXD2 ADAM3B-201ENST00000569937 840 ntBASIC14.24□□□□□ -0.13
SCG3Q8WXD2 ZNF286A-219ENST00000585194 607 ntTSL 4 BASIC14.24□□□□□ -0.13
SCG3Q8WXD2 CROCCP3-204ENST00000590118 574 ntTSL 4 BASIC14.24□□□□□ -0.13
SCG3Q8WXD2 AC005779.2-201ENST00000593083 550 ntAPPRIS P1 TSL 4 BASIC14.24□□□□□ -0.13
SCG3Q8WXD2 AC006064.4-201ENST00000602946 422 ntTSL 2 BASIC14.24□□□□□ -0.13
SCG3Q8WXD2 CALB1-201ENST00000265431 2533 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SCG3Q8WXD2 FES-201ENST00000328850 2829 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SCG3Q8WXD2 PRDM16-201ENST00000270722 8690 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
SCG3Q8WXD2 RNF41-202ENST00000394013 2452 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SCG3Q8WXD2 AC092143.1-201ENST00000556922 2776 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
SCG3Q8WXD2 PSME4-202ENST00000404125 7099 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SCG3Q8WXD2 CCT6B-201ENST00000314144 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SCG3Q8WXD2 EDEM3-202ENST00000367512 6678 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
SCG3Q8WXD2 GNAI2-203ENST00000422163 2407 ntTSL 2 BASIC14.24□□□□□ -0.13
SCG3Q8WXD2 CRY2-202ENST00000443527 4203 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms