Protein–RNA interactions for Protein: P62807

HIST1H2BC, Histone H2B type 1-C/E/F/G/I, humanhuman

Predictions only

Length 126 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H2BCP62807 CADM3-AS1-201ENST00000415675 5044 ntTSL 2 BASIC10.28□□□□□ -0.76
HIST1H2BCP62807 CSPG4P12-201ENST00000558282 4853 ntBASIC10.28□□□□□ -0.76
HIST1H2BCP62807 RAPGEF6-207ENST00000507093 5742 ntAPPRIS ALT1 TSL 1 (best) BASIC10.28□□□□□ -0.76
HIST1H2BCP62807 SHROOM3-201ENST00000296043 11020 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
HIST1H2BCP62807 TACC2-201ENST00000260733 3644 ntAPPRIS P4 TSL 1 (best) BASIC10.28□□□□□ -0.76
HIST1H2BCP62807 SERPINA10-202ENST00000393096 2451 ntAPPRIS P2 TSL 1 (best) BASIC10.28□□□□□ -0.76
HIST1H2BCP62807 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC10.28□□□□□ -0.76
HIST1H2BCP62807 TRAP1-212ENST00000575671 2309 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
HIST1H2BCP62807 GRID1-201ENST00000327946 5834 ntAPPRIS P1 TSL 2 BASIC10.28□□□□□ -0.76
HIST1H2BCP62807 ABCD1-201ENST00000218104 3664 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
HIST1H2BCP62807 MIS12-206ENST00000611091 2691 ntAPPRIS P1 TSL 2 BASIC10.28□□□□□ -0.76
HIST1H2BCP62807 PDE9A-207ENST00000398224 1671 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
HIST1H2BCP62807 PDE9A-210ENST00000398229 1684 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
HIST1H2BCP62807 AC007622.2-202ENST00000546714 1680 ntTSL 2 BASIC10.28□□□□□ -0.76
HIST1H2BCP62807 TP63-209ENST00000437221 2500 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
HIST1H2BCP62807 HRC-203ENST00000595625 2044 ntTSL 5 BASIC10.28□□□□□ -0.76
HIST1H2BCP62807 DNMT3A-201ENST00000264709 9501 ntAPPRIS P2 TSL 1 (best) BASIC10.28□□□□□ -0.76
HIST1H2BCP62807 TLR12P-201ENST00000413515 2706 ntBASIC10.27□□□□□ -0.76
HIST1H2BCP62807 AL118508.3-201ENST00000623468 1854 ntBASIC10.27□□□□□ -0.76
HIST1H2BCP62807 PCGF2-204ENST00000616199 3062 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
HIST1H2BCP62807 AP003108.3-201ENST00000623765 2234 ntBASIC10.27□□□□□ -0.76
HIST1H2BCP62807 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC10.27□□□□□ -0.76
HIST1H2BCP62807 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC10.27□□□□□ -0.76
HIST1H2BCP62807 PAX6-201ENST00000241001 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC10.27□□□□□ -0.76
HIST1H2BCP62807 POLR3H-203ENST00000396504 4176 ntAPPRIS P1 TSL 5 BASIC10.27□□□□□ -0.76
HIST1H2BCP62807 SGSM1-201ENST00000400358 6643 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.76
HIST1H2BCP62807 OLFML3-202ENST00000369551 1934 ntTSL 2 BASIC10.27□□□□□ -0.76
HIST1H2BCP62807 STK24-201ENST00000376547 2492 ntAPPRIS P3 TSL 1 (best) BASIC10.27□□□□□ -0.77
HIST1H2BCP62807 ULK4-201ENST00000301831 4613 ntAPPRIS P1 TSL 2 BASIC10.27□□□□□ -0.77
HIST1H2BCP62807 GABBR1-203ENST00000377012 4104 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
HIST1H2BCP62807 FAN1-201ENST00000362065 4891 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
HIST1H2BCP62807 DRD3-202ENST00000383673 1640 ntAPPRIS P3 TSL 1 (best) BASIC10.27□□□□□ -0.77
HIST1H2BCP62807 CDH11-201ENST00000268603 6857 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
HIST1H2BCP62807 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
HIST1H2BCP62807 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
HIST1H2BCP62807 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC10.27□□□□□ -0.77
HIST1H2BCP62807 RN7SKP297-201ENST00000411270 282 ntBASIC10.27□□□□□ -0.77
HIST1H2BCP62807 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC10.27□□□□□ -0.77
HIST1H2BCP62807 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC10.27□□□□□ -0.77
HIST1H2BCP62807 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
HIST1H2BCP62807 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC10.27□□□□□ -0.77
HIST1H2BCP62807 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC10.27□□□□□ -0.77
HIST1H2BCP62807 AL356740.1-201ENST00000602192 1297 ntBASIC10.27□□□□□ -0.77
HIST1H2BCP62807 AC068137.2-201ENST00000605408 478 ntBASIC10.27□□□□□ -0.77
HIST1H2BCP62807 AC117500.6-201ENST00000624871 588 ntBASIC10.27□□□□□ -0.77
HIST1H2BCP62807 MCCC2-201ENST00000340941 3665 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
HIST1H2BCP62807 TAF1C-201ENST00000341690 3678 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
HIST1H2BCP62807 LCTL-201ENST00000341509 3147 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
HIST1H2BCP62807 ENC1-206ENST00000537006 2024 ntAPPRIS P1 TSL 5 BASIC10.27□□□□□ -0.77
HIST1H2BCP62807 AC007952.5-201ENST00000572818 1486 ntBASIC10.27□□□□□ -0.77
HIST1H2BCP62807 ZNF574-201ENST00000222339 3309 ntTSL 3 BASIC10.27□□□□□ -0.77
HIST1H2BCP62807 AIF1L-207ENST00000372309 3515 ntTSL 2 BASIC10.27□□□□□ -0.77
HIST1H2BCP62807 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC10.27□□□□□ -0.77
HIST1H2BCP62807 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
HIST1H2BCP62807 IKZF4-201ENST00000262032 5229 ntAPPRIS P1 TSL 5 BASIC10.27□□□□□ -0.77
HIST1H2BCP62807 PFKM-202ENST00000340802 3176 ntTSL 2 BASIC10.27□□□□□ -0.77
HIST1H2BCP62807 ZFHX2-202ENST00000419474 9182 ntAPPRIS P1 TSL 5 BASIC10.27□□□□□ -0.77
HIST1H2BCP62807 ALDH3A2-219ENST00000579855 3583 ntAPPRIS P3 TSL 5 BASIC10.27□□□□□ -0.77
HIST1H2BCP62807 ZFYVE27-207ENST00000423811 3045 ntAPPRIS P4 TSL 5 BASIC10.27□□□□□ -0.77
HIST1H2BCP62807 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
HIST1H2BCP62807 FBF1-212ENST00000636174 3626 ntAPPRIS P2 TSL 5 BASIC10.27□□□□□ -0.77
HIST1H2BCP62807 SPDYE5-202ENST00000624640 2667 ntAPPRIS ALT2 TSL 5 BASIC10.27□□□□□ -0.77
HIST1H2BCP62807 LINC02210-CRHR1-202ENST00000634540 2695 ntAPPRIS P1 TSL 2 BASIC10.27□□□□□ -0.77
HIST1H2BCP62807 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
HIST1H2BCP62807 CRYZ-205ENST00000417775 2301 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
HIST1H2BCP62807 LOXL2-201ENST00000389131 3549 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
HIST1H2BCP62807 IFT80-201ENST00000326448 4306 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
HIST1H2BCP62807 WWP2-202ENST00000359154 4515 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
HIST1H2BCP62807 ZNF169-202ENST00000395395 1986 ntAPPRIS P1 TSL 2 BASIC10.26□□□□□ -0.77
HIST1H2BCP62807 SEZ6L-203ENST00000360929 6307 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
HIST1H2BCP62807 SLAMF7-205ENST00000444090 2393 ntAPPRIS ALT2 TSL 2 BASIC10.26□□□□□ -0.77
HIST1H2BCP62807 NCAM1-230ENST00000621850 2787 ntTSL 5 BASIC10.26□□□□□ -0.77
HIST1H2BCP62807 AC012313.8-201ENST00000595059 5402 ntBASIC10.26□□□□□ -0.77
HIST1H2BCP62807 G3BP1-201ENST00000356245 2803 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
HIST1H2BCP62807 MIR124-2HG-203ENST00000521441 2840 ntTSL 2 BASIC10.26□□□□□ -0.77
HIST1H2BCP62807 ADCK1-201ENST00000238561 2234 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
HIST1H2BCP62807 RBMY2FP-201ENST00000303922 2042 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
HIST1H2BCP62807 DDX39B-214ENST00000458640 2003 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
HIST1H2BCP62807 NBPF5P-201ENST00000357046 1606 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
HIST1H2BCP62807 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
HIST1H2BCP62807 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC10.26□□□□□ -0.77
HIST1H2BCP62807 SERPINA1-205ENST00000404814 1628 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
HIST1H2BCP62807 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
HIST1H2BCP62807 BARX1-AS1-201ENST00000453045 1445 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
HIST1H2BCP62807 FER1L4-208ENST00000611673 3860 ntTSL 2 BASIC10.26□□□□□ -0.77
HIST1H2BCP62807 USP5-202ENST00000389231 3083 ntAPPRIS P3 TSL 1 (best) BASIC10.26□□□□□ -0.77
HIST1H2BCP62807 AC026904.1-201ENST00000430626 3549 ntTSL 2 BASIC10.26□□□□□ -0.77
HIST1H2BCP62807 MRS2-203ENST00000378386 3313 ntAPPRIS P3 TSL 1 (best) BASIC10.26□□□□□ -0.77
HIST1H2BCP62807 SH2D2A-203ENST00000392306 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
HIST1H2BCP62807 SPTB-202ENST00000389720 6321 ntTSL 5 BASIC10.26□□□□□ -0.77
HIST1H2BCP62807 CIITA-202ENST00000381835 2344 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
HIST1H2BCP62807 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
HIST1H2BCP62807 SH3BGRL3-202ENST00000319041 768 ntTSL 2 BASIC10.26□□□□□ -0.77
HIST1H2BCP62807 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC10.26□□□□□ -0.77
HIST1H2BCP62807 PTMS-202ENST00000389462 773 ntTSL 2 BASIC10.26□□□□□ -0.77
HIST1H2BCP62807 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
HIST1H2BCP62807 GAS5-209ENST00000430245 723 ntTSL 3 BASIC10.26□□□□□ -0.77
HIST1H2BCP62807 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
HIST1H2BCP62807 ALG3P1-201ENST00000508806 1114 ntBASIC10.26□□□□□ -0.77
HIST1H2BCP62807 RUNX1T1-227ENST00000520724 2103 ntTSL 2 BASIC10.26□□□□□ -0.77
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms