Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 RNA5SP288-201ENST00000516075 93 ntBASIC17.12■□□□□ 0.33
COL15A1P39059 AC025576.1-201ENST00000536455 462 ntTSL 5 BASIC17.12■□□□□ 0.33
COL15A1P39059 AC073896.3-201ENST00000546789 437 ntTSL 5 BASIC17.12■□□□□ 0.33
COL15A1P39059 PIGH-210ENST00000560722 903 ntAPPRIS ALT1 TSL 2 BASIC17.12■□□□□ 0.33
COL15A1P39059 AC004584.1-201ENST00000572187 549 ntTSL 3 BASIC17.12■□□□□ 0.33
COL15A1P39059 PCTP-206ENST00000573500 919 ntTSL 3 BASIC17.12■□□□□ 0.33
COL15A1P39059 AC091132.6-201ENST00000586411 826 ntTSL 5 BASIC17.12■□□□□ 0.33
COL15A1P39059 CSAG3-201ENST00000599845 844 ntAPPRIS P5 TSL 1 (best) BASIC17.12■□□□□ 0.33
COL15A1P39059 Metazoa_SRP.156-201ENST00000622344 262 ntBASIC17.12■□□□□ 0.33
COL15A1P39059 CSAG2-203ENST00000638741 844 ntAPPRIS P5 TSL 1 (best) BASIC17.12■□□□□ 0.33
COL15A1P39059 C11orf21-201ENST00000381153 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
COL15A1P39059 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
COL15A1P39059 CEP70-201ENST00000264982 2732 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
COL15A1P39059 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
COL15A1P39059 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
COL15A1P39059 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
COL15A1P39059 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC17.11■□□□□ 0.33
COL15A1P39059 AKIP1-203ENST00000309377 1327 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
COL15A1P39059 SIGLECL1-201ENST00000316401 1708 ntAPPRIS P3 TSL 2 BASIC17.11■□□□□ 0.33
COL15A1P39059 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC17.11■□□□□ 0.33
COL15A1P39059 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
COL15A1P39059 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC17.11■□□□□ 0.33
COL15A1P39059 PATL2-208ENST00000560780 1863 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
COL15A1P39059 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
COL15A1P39059 SPAG8-202ENST00000396638 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
COL15A1P39059 CD48-201ENST00000368045 1793 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
COL15A1P39059 HAO1-201ENST00000378789 1777 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
COL15A1P39059 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
COL15A1P39059 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC17.11■□□□□ 0.33
COL15A1P39059 AL591806.3-201ENST00000289779 2096 ntAPPRIS P5 TSL 2 BASIC17.11■□□□□ 0.33
COL15A1P39059 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
COL15A1P39059 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
COL15A1P39059 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
COL15A1P39059 S100A2-202ENST00000368708 998 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
COL15A1P39059 RBP4-203ENST00000371469 814 ntTSL 5 BASIC17.11■□□□□ 0.33
COL15A1P39059 DBNDD2-207ENST00000372722 1202 ntTSL 3 BASIC17.11■□□□□ 0.33
COL15A1P39059 INMT-202ENST00000409539 803 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
COL15A1P39059 FTH1P18-201ENST00000412071 549 ntBASIC17.11■□□□□ 0.33
COL15A1P39059 FAM197Y6-201ENST00000420524 766 ntBASIC17.11■□□□□ 0.33
COL15A1P39059 GHRL-206ENST00000430179 856 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
COL15A1P39059 AC108879.1-201ENST00000438026 828 ntTSL 3 BASIC17.11■□□□□ 0.33
COL15A1P39059 AC092865.2-201ENST00000439409 971 ntBASIC17.11■□□□□ 0.33
COL15A1P39059 PRSS46-201ENST00000463091 982 ntAPPRIS P1 TSL 4 BASIC17.11■□□□□ 0.33
COL15A1P39059 TLN2-202ENST00000472902 2116 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
COL15A1P39059 AL662899.2-201ENST00000503322 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
COL15A1P39059 CLNK-203ENST00000507719 1143 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
COL15A1P39059 DTWD1-205ENST00000558653 1131 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
COL15A1P39059 FAM32A-204ENST00000588367 798 ntTSL 2 BASIC17.11■□□□□ 0.33
COL15A1P39059 NRSN2-206ENST00000608736 712 ntTSL 3 BASIC17.11■□□□□ 0.33
COL15A1P39059 AC006207.1-201ENST00000637958 562 ntTSL 5 BASIC17.11■□□□□ 0.33
COL15A1P39059 CR383656.2-201ENST00000548656 2254 ntBASIC17.11■□□□□ 0.33
COL15A1P39059 BPIFB1-201ENST00000253354 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
COL15A1P39059 SARS-201ENST00000234677 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
COL15A1P39059 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
COL15A1P39059 HIST2H2BE-201ENST00000369155 2194 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
COL15A1P39059 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
COL15A1P39059 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
COL15A1P39059 AC008038.1-201ENST00000634247 1314 ntBASIC17.11■□□□□ 0.33
COL15A1P39059 OSCP1-201ENST00000235532 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
COL15A1P39059 OSCP1-203ENST00000356637 1463 ntTSL 5 BASIC17.1■□□□□ 0.33
COL15A1P39059 SEC13-209ENST00000397117 1603 ntTSL 5 BASIC17.1■□□□□ 0.33
COL15A1P39059 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
COL15A1P39059 CDH16-204ENST00000565796 2694 ntTSL 2 BASIC17.1■□□□□ 0.33
COL15A1P39059 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
COL15A1P39059 PPT1-203ENST00000433473 2267 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
COL15A1P39059 AL031587.5-201ENST00000624344 1849 ntBASIC17.1■□□□□ 0.33
COL15A1P39059 MGRN1-211ENST00000588994 1665 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
COL15A1P39059 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
COL15A1P39059 IL18BP-201ENST00000260049 1354 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
COL15A1P39059 BPIFB6-201ENST00000349552 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
COL15A1P39059 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
COL15A1P39059 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC17.1■□□□□ 0.33
COL15A1P39059 DNAJB8-201ENST00000319153 2465 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
COL15A1P39059 TNFSF13-203ENST00000380535 2195 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
COL15A1P39059 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
COL15A1P39059 AC009474.1-201ENST00000455096 1565 ntBASIC17.1■□□□□ 0.33
COL15A1P39059 LINC02226-201ENST00000501071 1587 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
COL15A1P39059 TGM1-202ENST00000544573 1581 ntTSL 2 BASIC17.1■□□□□ 0.33
COL15A1P39059 ABI2-213ENST00000424558 2240 ntTSL 2 BASIC17.1■□□□□ 0.33
COL15A1P39059 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
COL15A1P39059 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
COL15A1P39059 FXYD2-202ENST00000292079 571 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
COL15A1P39059 GAST-201ENST00000329402 470 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
COL15A1P39059 SULT1A3-201ENST00000338971 1097 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
COL15A1P39059 IL37-204ENST00000352179 709 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
COL15A1P39059 ZWINT-202ENST00000361148 807 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
COL15A1P39059 TCEAL5-201ENST00000372680 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
COL15A1P39059 GLIPR1L2-203ENST00000547164 509 ntTSL 5 BASIC17.1■□□□□ 0.33
COL15A1P39059 AC138150.1-201ENST00000589950 570 ntTSL 4 BASIC17.1■□□□□ 0.33
COL15A1P39059 GMFG-206ENST00000597595 758 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
COL15A1P39059 Metazoa_SRP.122-201ENST00000610476 285 ntBASIC17.1■□□□□ 0.33
COL15A1P39059 AC139100.2-201ENST00000616901 662 ntBASIC17.1■□□□□ 0.33
COL15A1P39059 AC005865.2-202ENST00000635814 725 ntBASIC17.1■□□□□ 0.33
COL15A1P39059 FCGR3A-208ENST00000638849 873 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
COL15A1P39059 ERICH6-201ENST00000295910 2052 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
COL15A1P39059 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
COL15A1P39059 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
COL15A1P39059 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
COL15A1P39059 CSNK1E-201ENST00000359867 2642 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
COL15A1P39059 AC026271.1-201ENST00000447794 1348 ntBASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms