Protein–RNA interactions for Protein: P17677

GAP43, Neuromodulin, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAP43P17677 ZNF426-204ENST00000593003 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
GAP43P17677 ANKDD1A-202ENST00000395720 1518 ntTSL 5 BASIC15.16■□□□□ 0.02
GAP43P17677 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
GAP43P17677 EFR3B-202ENST00000401432 5162 ntTSL 2 BASIC15.16■□□□□ 0.02
GAP43P17677 KANK2-205ENST00000589359 3048 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
GAP43P17677 GPN1-211ENST00000610189 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
GAP43P17677 SLC7A7-201ENST00000285850 2263 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
GAP43P17677 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
GAP43P17677 MSRB3-202ENST00000355192 4289 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
GAP43P17677 MAP3K21-202ENST00000366623 3910 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
GAP43P17677 EMILIN1-201ENST00000380320 3943 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
GAP43P17677 IFNAR2-202ENST00000342136 2899 ntAPPRIS P4 TSL 1 (best) BASIC15.15■□□□□ 0.02
GAP43P17677 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
GAP43P17677 SYT12-201ENST00000393946 4534 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
GAP43P17677 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
GAP43P17677 HTR3A-201ENST00000299961 1994 ntTSL 2 BASIC15.15■□□□□ 0.02
GAP43P17677 TFEB-205ENST00000394283 2595 ntTSL 2 BASIC15.15■□□□□ 0.02
GAP43P17677 KRT33B-201ENST00000251646 1607 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
GAP43P17677 SNX19-211ENST00000533214 3096 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
GAP43P17677 AC092506.1-202ENST00000401022 528 ntBASIC15.15■□□□□ 0.02
GAP43P17677 FAM200B-201ENST00000422728 2962 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
GAP43P17677 DLGAP4-AS1-202ENST00000433238 593 ntTSL 3 BASIC15.15■□□□□ 0.02
GAP43P17677 ASGR2-203ENST00000446679 879 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
GAP43P17677 AC096649.1-201ENST00000449168 497 ntTSL 3 BASIC15.15■□□□□ 0.02
GAP43P17677 IMPA1-203ENST00000449740 1180 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
GAP43P17677 NOC2LP1-201ENST00000450578 752 ntBASIC15.15■□□□□ 0.02
GAP43P17677 ESRRAP2-203ENST00000453309 822 ntTSL 5 BASIC15.15■□□□□ 0.02
GAP43P17677 AC079250.1-201ENST00000456046 531 ntBASIC15.15■□□□□ 0.02
GAP43P17677 RPL18AP3-201ENST00000462885 528 ntBASIC15.15■□□□□ 0.02
GAP43P17677 AC034231.1-201ENST00000507251 537 ntTSL 4 BASIC15.15■□□□□ 0.02
GAP43P17677 CHIC2-204ENST00000512964 711 ntTSL 5 BASIC15.15■□□□□ 0.02
GAP43P17677 TNFSF13B-206ENST00000542136 495 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
GAP43P17677 AC007952.4-201ENST00000573866 637 ntBASIC15.15■□□□□ 0.02
GAP43P17677 AC003043.1-201ENST00000588260 337 ntTSL 3 BASIC15.15■□□□□ 0.02
GAP43P17677 ZNF530-203ENST00000597864 634 ntTSL 2 BASIC15.15■□□□□ 0.02
GAP43P17677 MIR8071-1-201ENST00000616769 65 ntBASIC15.15■□□□□ 0.02
GAP43P17677 MIR8071-2-201ENST00000616772 65 ntBASIC15.15■□□□□ 0.02
GAP43P17677 SHC1-202ENST00000368445 3472 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
GAP43P17677 ADAMTSL4-201ENST00000271643 4250 ntAPPRIS P3 TSL 5 BASIC15.15■□□□□ 0.02
GAP43P17677 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
GAP43P17677 EFHC1-221ENST00000636489 2421 ntTSL 5 BASIC15.15■□□□□ 0.02
GAP43P17677 ABCG8-201ENST00000272286 2665 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
GAP43P17677 ATG4C-201ENST00000317868 2938 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
GAP43P17677 VPS26B-201ENST00000281187 3691 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
GAP43P17677 EDNRB-204ENST00000626030 1571 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
GAP43P17677 UQCC2-204ENST00000607484 1314 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
GAP43P17677 CDHR5-203ENST00000397542 3489 ntAPPRIS P4 TSL 1 (best) BASIC15.15■□□□□ 0.02
GAP43P17677 ADCY3-202ENST00000405392 4397 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
GAP43P17677 IKBKE-201ENST00000578328 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
GAP43P17677 SLC2A14-205ENST00000535295 1732 ntTSL 2 BASIC15.14■□□□□ 0.01
GAP43P17677 COL6A1-207ENST00000612273 3251 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
GAP43P17677 CDIP1-201ENST00000399599 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
GAP43P17677 SATB2-211ENST00000614512 4972 ntTSL 5 BASIC15.14■□□□□ 0.01
GAP43P17677 GNAS-215ENST00000371102 3438 ntTSL 5 BASIC15.14■□□□□ 0.01
GAP43P17677 DNM1-212ENST00000627543 4734 ntAPPRIS ALT1 TSL 5 BASIC15.14■□□□□ 0.01
GAP43P17677 CALB1-201ENST00000265431 2533 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
GAP43P17677 GAPVD1-205ENST00000394084 3190 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
GAP43P17677 DNAJB6-204ENST00000429029 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
GAP43P17677 LAIR1-209ENST00000434277 1645 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
GAP43P17677 MRVI1-204ENST00000527509 2686 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
GAP43P17677 ATP12A-201ENST00000218548 3732 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
GAP43P17677 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC15.14■□□□□ 0.01
GAP43P17677 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC15.14■□□□□ 0.01
GAP43P17677 CCHCR1-203ENST00000396268 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
GAP43P17677 ATP2B3-201ENST00000263519 6420 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
GAP43P17677 GIPC3-201ENST00000322315 4335 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
GAP43P17677 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
GAP43P17677 OS9-203ENST00000389142 2457 ntTSL 5 BASIC15.14■□□□□ 0.01
GAP43P17677 CTCFL-205ENST00000423479 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
GAP43P17677 SHPK-201ENST00000225519 3838 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
GAP43P17677 EPPIN-201ENST00000336443 1217 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
GAP43P17677 HCRTR1-201ENST00000373705 1170 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
GAP43P17677 C20orf141-201ENST00000380589 730 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
GAP43P17677 AC112721.1-201ENST00000409162 588 ntTSL 3 BASIC15.14■□□□□ 0.01
GAP43P17677 HPGD-203ENST00000422112 805 ntTSL 2 BASIC15.14■□□□□ 0.01
GAP43P17677 AL139241.1-201ENST00000433374 1168 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
GAP43P17677 BX324167.1-201ENST00000451118 805 ntTSL 5 BASIC15.14■□□□□ 0.01
GAP43P17677 PGRMC2-206ENST00000512483 1144 ntTSL 5 BASIC15.14■□□□□ 0.01
GAP43P17677 CD44-224ENST00000526669 870 ntTSL 5 BASIC15.14■□□□□ 0.01
GAP43P17677 AP000911.2-201ENST00000534330 502 ntBASIC15.14■□□□□ 0.01
GAP43P17677 NEU3-207ENST00000534628 746 ntTSL 2 BASIC15.14■□□□□ 0.01
GAP43P17677 AC068867.1-201ENST00000559855 150 ntBASIC15.14■□□□□ 0.01
GAP43P17677 AC010531.4-203ENST00000561709 660 ntTSL 3 BASIC15.14■□□□□ 0.01
GAP43P17677 AC020659.1-202ENST00000564432 531 ntTSL 5 BASIC15.14■□□□□ 0.01
GAP43P17677 LINC02176-201ENST00000569104 598 ntTSL 4 BASIC15.14■□□□□ 0.01
GAP43P17677 AC090617.6-201ENST00000572790 443 ntTSL 3 BASIC15.14■□□□□ 0.01
GAP43P17677 MBP-238ENST00000580402 915 ntTSL 5 BASIC15.14■□□□□ 0.01
GAP43P17677 MIA-206ENST00000597784 455 ntAPPRIS P1 TSL 3 BASIC15.14■□□□□ 0.01
GAP43P17677 DEK-202ENST00000397239 3427 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
GAP43P17677 PRAME-214ENST00000543184 2758 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
GAP43P17677 ADD1-207ENST00000446856 3745 ntTSL 5 BASIC15.14■□□□□ 0.01
GAP43P17677 ARRB1-202ENST00000420843 3336 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
GAP43P17677 SNAP91-215ENST00000521743 4263 ntAPPRIS P2 TSL 5 BASIC15.14■□□□□ 0.01
GAP43P17677 SRPRA-201ENST00000332118 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
GAP43P17677 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
GAP43P17677 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC15.14■□□□□ 0.01
GAP43P17677 TRMT1L-201ENST00000367506 4392 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
GAP43P17677 C1QTNF9-202ENST00000382071 1854 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
GAP43P17677 UBTF-209ENST00000529383 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
GAP43P17677 PEG10-205ENST00000612748 2585 ntAPPRIS P5 TSL 5 BASIC15.14■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms