Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 TEX36-AS1-202ENST00000446081 749 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
COL6A2P12110 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC13.65□□□□□ -0.22
COL6A2P12110 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
COL6A2P12110 AC010285.2-201ENST00000510240 569 ntTSL 4 BASIC13.65□□□□□ -0.22
COL6A2P12110 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC13.65□□□□□ -0.22
COL6A2P12110 MFF-223ENST00000524634 647 ntTSL 2 BASIC13.65□□□□□ -0.22
COL6A2P12110 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
COL6A2P12110 FAM236A-201ENST00000593662 453 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
COL6A2P12110 FAM236B-201ENST00000596535 465 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
COL6A2P12110 AL133467.4-201ENST00000602953 725 ntBASIC13.65□□□□□ -0.22
COL6A2P12110 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC13.65□□□□□ -0.22
COL6A2P12110 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC13.65□□□□□ -0.22
COL6A2P12110 ABCA2-203ENST00000371605 8151 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
COL6A2P12110 AC107375.1-201ENST00000564464 2231 ntBASIC13.65□□□□□ -0.22
COL6A2P12110 SLC23A1-202ENST00000353963 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
COL6A2P12110 PRKAR1A-203ENST00000392711 4327 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
COL6A2P12110 SLC26A6-207ENST00000420764 2630 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
COL6A2P12110 ERG-211ENST00000453032 1595 ntTSL 2 BASIC13.65□□□□□ -0.22
COL6A2P12110 CCNE2-201ENST00000308108 2724 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
COL6A2P12110 CKMT1B-201ENST00000300283 1779 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
COL6A2P12110 CKMT1A-204ENST00000434505 1779 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
COL6A2P12110 CHMP4C-201ENST00000297265 1866 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
COL6A2P12110 MTMR9-202ENST00000526292 1960 ntTSL 2 BASIC13.65□□□□□ -0.22
COL6A2P12110 RIN3-212ENST00000620541 3617 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
COL6A2P12110 PAPPA-201ENST00000328252 10959 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
COL6A2P12110 ZNF335-201ENST00000322927 4430 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
COL6A2P12110 KLC4-203ENST00000394056 2770 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
COL6A2P12110 TESMIN-204ENST00000443940 3495 ntTSL 2 BASIC13.65□□□□□ -0.23
COL6A2P12110 TNRC18P1-201ENST00000502875 3650 ntBASIC13.65□□□□□ -0.23
COL6A2P12110 TXNDC17-201ENST00000250101 2219 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
COL6A2P12110 TRPV1-209ENST00000576351 2525 ntTSL 5 BASIC13.64□□□□□ -0.23
COL6A2P12110 DCUN1D4-201ENST00000334635 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
COL6A2P12110 HIPK1-205ENST00000369558 8157 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
COL6A2P12110 CAPN5-201ENST00000278559 4397 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
COL6A2P12110 AC012531.1-201ENST00000562848 2680 ntBASIC13.64□□□□□ -0.23
COL6A2P12110 CCR7-201ENST00000246657 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
COL6A2P12110 TMEM2-202ENST00000377044 6523 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
COL6A2P12110 CCT8L2-201ENST00000359963 2060 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
COL6A2P12110 ARHGEF9-220ENST00000635729 1761 ntTSL 5 BASIC13.64□□□□□ -0.23
COL6A2P12110 TNIK-204ENST00000436636 6970 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
COL6A2P12110 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
COL6A2P12110 CREBZF-204ENST00000527447 4037 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
COL6A2P12110 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
COL6A2P12110 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
COL6A2P12110 RPS3-201ENST00000278572 907 ntTSL 3 BASIC13.64□□□□□ -0.23
COL6A2P12110 KRT17P5-201ENST00000332088 839 ntBASIC13.64□□□□□ -0.23
COL6A2P12110 IGHV1-3-201ENST00000390595 395 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
COL6A2P12110 KRTAP10-13P-201ENST00000412914 571 ntBASIC13.64□□□□□ -0.23
COL6A2P12110 IL2RG-204ENST00000456850 540 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
COL6A2P12110 FRMD4A-204ENST00000475141 1233 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
COL6A2P12110 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC13.64□□□□□ -0.23
COL6A2P12110 CPLX2-209ENST00000515094 576 ntAPPRIS P1 TSL 4 BASIC13.64□□□□□ -0.23
COL6A2P12110 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC13.64□□□□□ -0.23
COL6A2P12110 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC13.64□□□□□ -0.23
COL6A2P12110 C12orf73-210ENST00000552940 685 ntTSL 2 BASIC13.64□□□□□ -0.23
COL6A2P12110 TCL1A-205ENST00000555202 717 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
COL6A2P12110 MIR4326-201ENST00000582203 59 ntBASIC13.64□□□□□ -0.23
COL6A2P12110 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC13.64□□□□□ -0.23
COL6A2P12110 RPL18A-204ENST00000599898 491 ntTSL 2 BASIC13.64□□□□□ -0.23
COL6A2P12110 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC13.64□□□□□ -0.23
COL6A2P12110 KAZN-205ENST00000400798 3643 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
COL6A2P12110 PEAR1-201ENST00000292357 4866 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
COL6A2P12110 SLC4A11-207ENST00000539553 2832 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
COL6A2P12110 SPG11-210ENST00000558319 6426 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
COL6A2P12110 RAPGEF1-202ENST00000372190 6045 ntAPPRIS P4 TSL 1 (best) BASIC13.64□□□□□ -0.23
COL6A2P12110 AC015921.1-201ENST00000574885 2546 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
COL6A2P12110 DHX30-201ENST00000348968 3994 ntTSL 5 BASIC13.64□□□□□ -0.23
COL6A2P12110 NRXN1-259ENST00000637511 3651 ntTSL 5 BASIC13.64□□□□□ -0.23
COL6A2P12110 SLC5A5-201ENST00000222248 3576 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
COL6A2P12110 RBM15-204ENST00000617047 3284 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
COL6A2P12110 DYNC1I1-201ENST00000324972 2950 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
COL6A2P12110 PES1P2-201ENST00000449745 1735 ntBASIC13.64□□□□□ -0.23
COL6A2P12110 SGMS1-202ENST00000361781 3744 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
COL6A2P12110 DNAJC30-201ENST00000395176 2485 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
COL6A2P12110 DENND1B-211ENST00000620048 8378 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
COL6A2P12110 MOGAT2-201ENST00000198801 1404 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
COL6A2P12110 NUP54-201ENST00000264883 2367 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
COL6A2P12110 KIAA1217-209ENST00000430453 5962 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
COL6A2P12110 KIAA1217-211ENST00000458595 5977 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
COL6A2P12110 DPP8-201ENST00000300141 3139 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
COL6A2P12110 SLC39A6-204ENST00000590986 3003 ntAPPRIS P3 TSL 5 BASIC13.64□□□□□ -0.23
COL6A2P12110 CEMIP-202ENST00000356249 7297 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
COL6A2P12110 KRT15-202ENST00000393974 3758 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
COL6A2P12110 HERPUD1-204ENST00000439977 2946 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
COL6A2P12110 AL022323.5-201ENST00000624101 2059 ntBASIC13.63□□□□□ -0.23
COL6A2P12110 PKP1-203ENST00000367324 5384 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
COL6A2P12110 DIDO1-204ENST00000370368 2704 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
COL6A2P12110 RRM2B-211ENST00000621845 3483 ntTSL 2 BASIC13.63□□□□□ -0.23
COL6A2P12110 MPZL2-201ENST00000278937 2620 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
COL6A2P12110 HLA-E-201ENST00000376630 2601 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
COL6A2P12110 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
COL6A2P12110 CYB561D1-206ENST00000496961 3424 ntTSL 2 BASIC13.63□□□□□ -0.23
COL6A2P12110 NTNG1-204ENST00000370067 4628 ntTSL 5 BASIC13.63□□□□□ -0.23
COL6A2P12110 HINT3-201ENST00000229633 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
COL6A2P12110 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC13.63□□□□□ -0.23
COL6A2P12110 CNKSR3-204ENST00000479339 2023 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
COL6A2P12110 UBL7-201ENST00000361351 1360 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
COL6A2P12110 AP000347.1-201ENST00000417194 5004 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
COL6A2P12110 COX14-201ENST00000317943 708 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
COL6A2P12110 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms