Protein–RNA interactions for Protein: P03979

TRGV3, T cell receptor gamma variable 3 (Fragment), humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV3P03979 LINC01598-205ENST00000508763 719 ntTSL 5 BASIC10.92□□□□□ -0.66
TRGV3P03979 AC138701.2-201ENST00000553634 226 ntBASIC10.92□□□□□ -0.66
TRGV3P03979 TPM1-223ENST00000560445 485 ntTSL 3 BASIC10.92□□□□□ -0.66
TRGV3P03979 DUSP22-213ENST00000605035 1231 ntTSL 2 BASIC10.92□□□□□ -0.66
TRGV3P03979 CNOT7-213ENST00000628418 432 ntTSL 5 BASIC10.92□□□□□ -0.66
TRGV3P03979 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC10.92□□□□□ -0.66
TRGV3P03979 CXorf40A-212ENST00000514208 1840 ntAPPRIS ALT1 TSL 5 BASIC10.92□□□□□ -0.66
TRGV3P03979 SFSWAP-210ENST00000541286 3219 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
TRGV3P03979 KCNAB2-219ENST00000602612 2396 ntTSL 2 BASIC10.92□□□□□ -0.66
TRGV3P03979 HLA-DQB1-202ENST00000399079 1501 ntBASIC10.92□□□□□ -0.66
TRGV3P03979 METTL13-203ENST00000367737 2865 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
TRGV3P03979 DNAJC13-201ENST00000260818 7730 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
TRGV3P03979 DEPTOR-201ENST00000286234 2569 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
TRGV3P03979 PDE5A-202ENST00000354960 7154 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
TRGV3P03979 PPARG-205ENST00000397010 2017 ntAPPRIS ALT1 TSL 1 (best) BASIC10.92□□□□□ -0.66
TRGV3P03979 DIS3L2-205ENST00000409401 2048 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
TRGV3P03979 ZMYND15-206ENST00000592813 2274 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
TRGV3P03979 SNX19-211ENST00000533214 3096 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
TRGV3P03979 ZNF646-202ENST00000394979 8118 ntAPPRIS ALT2 BASIC10.92□□□□□ -0.66
TRGV3P03979 MYO9B-201ENST00000397274 7532 ntTSL 5 BASIC10.92□□□□□ -0.66
TRGV3P03979 PPP6R2-204ENST00000395744 3293 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
TRGV3P03979 PPM1L-201ENST00000295839 1449 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
TRGV3P03979 CAB39L-204ENST00000409130 1411 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
TRGV3P03979 PPFIA4-201ENST00000272198 5045 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
TRGV3P03979 AC093462.1-201ENST00000621167 1683 ntBASIC10.92□□□□□ -0.66
TRGV3P03979 TSPEAR-AS2-202ENST00000354333 2422 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
TRGV3P03979 ZFP2-201ENST00000361362 2429 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
TRGV3P03979 HBP1-212ENST00000485846 2420 ntAPPRIS P1 TSL 2 BASIC10.92□□□□□ -0.66
TRGV3P03979 RGMA-204ENST00000543599 3174 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
TRGV3P03979 DLGAP4-202ENST00000340491 2392 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
TRGV3P03979 GLP2R-204ENST00000574745 1882 ntTSL 2 BASIC10.91□□□□□ -0.66
TRGV3P03979 SRRM1-201ENST00000323848 4011 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
TRGV3P03979 MYO1D-202ENST00000394649 5451 ntTSL 5 BASIC10.91□□□□□ -0.66
TRGV3P03979 Z98885.2-201ENST00000565177 1567 ntTSL 2 BASIC10.91□□□□□ -0.66
TRGV3P03979 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC10.91□□□□□ -0.66
TRGV3P03979 CAMKK2-205ENST00000392474 4453 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
TRGV3P03979 AC073869.1-201ENST00000415574 2762 ntBASIC10.91□□□□□ -0.66
TRGV3P03979 LDLRAD4-201ENST00000359446 8486 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
TRGV3P03979 LMAN2L-202ENST00000377079 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
TRGV3P03979 C11orf21-201ENST00000381153 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
TRGV3P03979 HPSE-201ENST00000311412 4615 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
TRGV3P03979 MAN2B1-203ENST00000456935 3184 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
TRGV3P03979 AC006372.4-201ENST00000624122 1543 ntBASIC10.91□□□□□ -0.66
TRGV3P03979 AC011298.1-201ENST00000407635 3398 ntTSL 2 BASIC10.91□□□□□ -0.66
TRGV3P03979 SEC61B-201ENST00000223641 545 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
TRGV3P03979 FERD3L-201ENST00000275461 640 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
TRGV3P03979 RPS9-201ENST00000302907 829 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
TRGV3P03979 LEMD1-205ENST00000367154 786 ntTSL 2 BASIC10.91□□□□□ -0.66
TRGV3P03979 KNCN-202ENST00000396314 608 ntAPPRIS P3 TSL 4 BASIC10.91□□□□□ -0.66
TRGV3P03979 AC073316.1-202ENST00000402115 988 ntTSL 5 BASIC10.91□□□□□ -0.66
TRGV3P03979 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
TRGV3P03979 DCAF7-201ENST00000415273 1220 ntTSL 2 BASIC10.91□□□□□ -0.66
TRGV3P03979 LINC01006-202ENST00000418309 640 ntTSL 3 BASIC10.91□□□□□ -0.66
TRGV3P03979 ALKBH2-203ENST00000440112 574 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
TRGV3P03979 BANF1-202ENST00000445560 946 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
TRGV3P03979 TEX36-AS1-202ENST00000446081 749 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
TRGV3P03979 AL356218.1-201ENST00000450864 353 ntTSL 3 BASIC10.91□□□□□ -0.66
TRGV3P03979 SEC61B-203ENST00000498603 587 ntTSL 3 BASIC10.91□□□□□ -0.66
TRGV3P03979 COQ10BP2-201ENST00000513804 724 ntBASIC10.91□□□□□ -0.66
TRGV3P03979 AC087269.1-202ENST00000519147 400 ntTSL 3 BASIC10.91□□□□□ -0.66
TRGV3P03979 AP001160.1-201ENST00000535817 565 ntTSL 3 BASIC10.91□□□□□ -0.66
TRGV3P03979 PTGR1-209ENST00000538962 1200 ntTSL 2 BASIC10.91□□□□□ -0.66
TRGV3P03979 AC133919.1-201ENST00000562203 416 ntTSL 3 BASIC10.91□□□□□ -0.66
TRGV3P03979 MIR3907-201ENST00000579424 151 ntBASIC10.91□□□□□ -0.66
TRGV3P03979 PGPEP1-203ENST00000595066 762 ntTSL 2 BASIC10.91□□□□□ -0.66
TRGV3P03979 EAF1-AS1-208ENST00000608408 770 ntTSL 5 BASIC10.91□□□□□ -0.66
TRGV3P03979 SNRPA1-216ENST00000626000 539 ntTSL 5 BASIC10.91□□□□□ -0.66
TRGV3P03979 CILP-201ENST00000261883 5695 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
TRGV3P03979 GNG4-202ENST00000366598 1721 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
TRGV3P03979 SLC13A5-202ENST00000381074 1738 ntTSL 2 BASIC10.91□□□□□ -0.66
TRGV3P03979 PDE2A-203ENST00000418754 2855 ntTSL 2 BASIC10.91□□□□□ -0.66
TRGV3P03979 AC068888.1-207ENST00000546793 2863 ntTSL 2 BASIC10.91□□□□□ -0.66
TRGV3P03979 PPP6R2-203ENST00000395741 3304 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
TRGV3P03979 CYFIP2-219ENST00000616178 4210 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
TRGV3P03979 GGT1-203ENST00000400382 2628 ntAPPRIS P1 TSL 2 BASIC10.91□□□□□ -0.66
TRGV3P03979 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
TRGV3P03979 SCFD1-203ENST00000458591 2359 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
TRGV3P03979 GTPBP4-202ENST00000360803 5075 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
TRGV3P03979 MRVI1-216ENST00000547195 6155 ntTSL 2 BASIC10.91□□□□□ -0.66
TRGV3P03979 POPDC2-201ENST00000264231 1679 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
TRGV3P03979 EHMT2-204ENST00000395728 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
TRGV3P03979 VDR-201ENST00000229022 4773 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
TRGV3P03979 PPP5D1-201ENST00000414155 1882 ntAPPRIS P5 TSL 2 BASIC10.91□□□□□ -0.66
TRGV3P03979 LDB3-207ENST00000542786 1889 ntTSL 2 BASIC10.91□□□□□ -0.66
TRGV3P03979 GFI1B-207ENST00000636137 1870 ntTSL 5 BASIC10.91□□□□□ -0.66
TRGV3P03979 IL20RA-207ENST00000541547 3382 ntTSL 2 BASIC10.91□□□□□ -0.66
TRGV3P03979 EIF3A-201ENST00000369144 6646 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
TRGV3P03979 SLC23A1-201ENST00000348729 2299 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
TRGV3P03979 C19orf12-209ENST00000623113 4242 ntTSL 2 BASIC10.91□□□□□ -0.66
TRGV3P03979 RER1-207ENST00000488353 2469 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
TRGV3P03979 STXBP1-202ENST00000373302 3967 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
TRGV3P03979 SHOX-202ENST00000381575 1351 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
TRGV3P03979 LINC01114-203ENST00000425879 2434 ntTSL 2 BASIC10.9□□□□□ -0.66
TRGV3P03979 DRD3-203ENST00000460779 1557 ntAPPRIS P3 TSL 2 BASIC10.9□□□□□ -0.66
TRGV3P03979 INSC-205ENST00000525218 1576 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
TRGV3P03979 NUP58-206ENST00000463407 6360 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
TRGV3P03979 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
TRGV3P03979 AFAP1-203ENST00000382543 2590 ntAPPRIS ALT1 TSL 5 BASIC10.9□□□□□ -0.66
TRGV3P03979 ATG13-215ENST00000529655 2566 ntAPPRIS P1 TSL 2 BASIC10.9□□□□□ -0.66
TRGV3P03979 DHX30-201ENST00000348968 3994 ntTSL 5 BASIC10.9□□□□□ -0.66
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms