Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 AL137078.1-201ENST00000446280 404 ntTSL 2 BASIC13□□□□□ -0.33
CCDC187A0A096LP49 AL512288.1-201ENST00000448015 491 ntTSL 5 BASIC13□□□□□ -0.33
CCDC187A0A096LP49 AL390961.2-201ENST00000454991 472 ntTSL 3 BASIC13□□□□□ -0.33
CCDC187A0A096LP49 AC004923.3-201ENST00000527532 355 ntBASIC13□□□□□ -0.33
CCDC187A0A096LP49 AC023051.2-201ENST00000541141 460 ntBASIC13□□□□□ -0.33
CCDC187A0A096LP49 AC010202.1-201ENST00000551181 405 ntBASIC13□□□□□ -0.33
CCDC187A0A096LP49 GRAMD4P6-201ENST00000556999 244 ntBASIC13□□□□□ -0.33
CCDC187A0A096LP49 SEPT4-AS1-203ENST00000580769 1000 ntTSL 3 BASIC13□□□□□ -0.33
CCDC187A0A096LP49 RBFOX3-206ENST00000582043 1143 ntTSL 5 BASIC13□□□□□ -0.33
CCDC187A0A096LP49 AC016582.2-202ENST00000587765 1094 ntBASIC13□□□□□ -0.33
CCDC187A0A096LP49 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CCDC187A0A096LP49 NEK4P3-201ENST00000604859 544 ntBASIC13□□□□□ -0.33
CCDC187A0A096LP49 AL591424.3-201ENST00000614278 872 ntBASIC13□□□□□ -0.33
CCDC187A0A096LP49 GSTT2-202ENST00000621118 1112 ntTSL 5 BASIC13□□□□□ -0.33
CCDC187A0A096LP49 AC020922.4-201ENST00000621389 339 ntBASIC13□□□□□ -0.33
CCDC187A0A096LP49 TMEM211-203ENST00000640159 1122 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
CCDC187A0A096LP49 TMPRSS2-201ENST00000332149 3205 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CCDC187A0A096LP49 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CCDC187A0A096LP49 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC13□□□□□ -0.33
CCDC187A0A096LP49 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC13□□□□□ -0.33
CCDC187A0A096LP49 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CCDC187A0A096LP49 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC13□□□□□ -0.33
CCDC187A0A096LP49 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
CCDC187A0A096LP49 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
CCDC187A0A096LP49 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CCDC187A0A096LP49 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
CCDC187A0A096LP49 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
CCDC187A0A096LP49 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CCDC187A0A096LP49 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC13□□□□□ -0.33
CCDC187A0A096LP49 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CCDC187A0A096LP49 AC117489.1-201ENST00000625169 3217 ntBASIC13□□□□□ -0.33
CCDC187A0A096LP49 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CCDC187A0A096LP49 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC13□□□□□ -0.33
CCDC187A0A096LP49 SLC1A5-202ENST00000434726 1872 ntTSL 2 BASIC12.99□□□□□ -0.33
CCDC187A0A096LP49 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC12.99□□□□□ -0.33
CCDC187A0A096LP49 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CCDC187A0A096LP49 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC12.99□□□□□ -0.33
CCDC187A0A096LP49 AC040160.2-201ENST00000623816 1675 ntBASIC12.99□□□□□ -0.33
CCDC187A0A096LP49 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
CCDC187A0A096LP49 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC12.99□□□□□ -0.33
CCDC187A0A096LP49 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
CCDC187A0A096LP49 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CCDC187A0A096LP49 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC12.99□□□□□ -0.33
CCDC187A0A096LP49 GFI1B-203ENST00000372123 1514 ntTSL 5 BASIC12.99□□□□□ -0.33
CCDC187A0A096LP49 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CCDC187A0A096LP49 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
CCDC187A0A096LP49 OR2T8-201ENST00000319968 939 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
CCDC187A0A096LP49 CELA3A-202ENST00000374663 649 ntTSL 2 BASIC12.99□□□□□ -0.33
CCDC187A0A096LP49 SAPCD1-AS1-202ENST00000419679 461 ntTSL 3 BASIC12.99□□□□□ -0.33
CCDC187A0A096LP49 KCNK15-AS1-203ENST00000427598 862 ntTSL 2 BASIC12.99□□□□□ -0.33
CCDC187A0A096LP49 LINC00399-201ENST00000439008 414 ntTSL 2 BASIC12.99□□□□□ -0.33
CCDC187A0A096LP49 AC103923.1-201ENST00000453229 1228 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
CCDC187A0A096LP49 AL021391.1-201ENST00000454439 545 ntTSL 4 BASIC12.99□□□□□ -0.33
CCDC187A0A096LP49 RNU1-80P-201ENST00000459500 161 ntBASIC12.99□□□□□ -0.33
CCDC187A0A096LP49 LINC02369-202ENST00000540745 801 ntTSL 5 BASIC12.99□□□□□ -0.33
CCDC187A0A096LP49 AC018845.3-201ENST00000562536 516 ntTSL 3 BASIC12.99□□□□□ -0.33
CCDC187A0A096LP49 AC087741.1-205ENST00000572730 750 ntTSL 3 BASIC12.99□□□□□ -0.33
CCDC187A0A096LP49 MYMX-201ENST00000573382 817 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
CCDC187A0A096LP49 RN7SL134P-201ENST00000579756 303 ntBASIC12.99□□□□□ -0.33
CCDC187A0A096LP49 AC095350.1-204ENST00000585405 616 ntTSL 5 BASIC12.99□□□□□ -0.33
CCDC187A0A096LP49 AC010504.1-201ENST00000591311 585 ntTSL 3 BASIC12.99□□□□□ -0.33
CCDC187A0A096LP49 AC005786.2-201ENST00000592368 369 ntTSL 3 BASIC12.99□□□□□ -0.33
CCDC187A0A096LP49 AL357143.1-203ENST00000639750 881 ntBASIC12.99□□□□□ -0.33
CCDC187A0A096LP49 OR2T8-202ENST00000641945 1226 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
CCDC187A0A096LP49 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CCDC187A0A096LP49 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC12.99□□□□□ -0.33
CCDC187A0A096LP49 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC12.99□□□□□ -0.33
CCDC187A0A096LP49 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC12.99□□□□□ -0.33
CCDC187A0A096LP49 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CCDC187A0A096LP49 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CCDC187A0A096LP49 HSPA1L-201ENST00000375654 2544 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CCDC187A0A096LP49 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CCDC187A0A096LP49 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC12.99□□□□□ -0.33
CCDC187A0A096LP49 C10orf88-204ENST00000481909 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CCDC187A0A096LP49 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC12.99□□□□□ -0.33
CCDC187A0A096LP49 CACNA2D2-204ENST00000424201 5206 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
CCDC187A0A096LP49 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC12.99□□□□□ -0.33
CCDC187A0A096LP49 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CCDC187A0A096LP49 GJB1-201ENST00000361726 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CCDC187A0A096LP49 SAP18-201ENST00000382533 2298 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
CCDC187A0A096LP49 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
CCDC187A0A096LP49 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CCDC187A0A096LP49 ACKR3-201ENST00000272928 2203 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
CCDC187A0A096LP49 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
CCDC187A0A096LP49 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CCDC187A0A096LP49 SVOPL-202ENST00000419765 1523 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
CCDC187A0A096LP49 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC12.98□□□□□ -0.33
CCDC187A0A096LP49 S100PBP-203ENST00000373476 3320 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
CCDC187A0A096LP49 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
CCDC187A0A096LP49 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CCDC187A0A096LP49 CWC27-201ENST00000381070 2078 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CCDC187A0A096LP49 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
CCDC187A0A096LP49 ABLIM2-215ENST00000545242 1972 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
CCDC187A0A096LP49 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
CCDC187A0A096LP49 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
CCDC187A0A096LP49 UBE2A-206ENST00000625938 1381 ntTSL 2 BASIC12.98□□□□□ -0.33
CCDC187A0A096LP49 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CCDC187A0A096LP49 GPR45-201ENST00000258456 1307 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
CCDC187A0A096LP49 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.33
CCDC187A0A096LP49 PRMT2-216ENST00000621201 1301 ntTSL 5 BASIC12.98□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms