Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 MAP3K12-203ENST00000547035 2944 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
CDC42BPAQ5VT25 ASGR2-201ENST00000254850 1396 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
CDC42BPAQ5VT25 ASGR2-202ENST00000355035 1386 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CDC42BPAQ5VT25 ADPRH-202ENST00000465513 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CDC42BPAQ5VT25 SNCAIP-222ENST00000542191 2729 ntTSL 5 BASIC19.97■□□□□ 0.79
CDC42BPAQ5VT25 TPT1-201ENST00000309246 1008 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CDC42BPAQ5VT25 GSTM1-204ENST00000369823 852 ntTSL 3 BASIC19.97■□□□□ 0.79
CDC42BPAQ5VT25 AC025257.1-201ENST00000550926 375 ntTSL 3 BASIC19.97■□□□□ 0.79
CDC42BPAQ5VT25 TRPM1-210ENST00000559179 1002 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CDC42BPAQ5VT25 SNORD55-201ENST00000581525 80 ntBASIC19.97■□□□□ 0.79
CDC42BPAQ5VT25 AL138828.1-208ENST00000585946 824 ntTSL 5 BASIC19.97■□□□□ 0.79
CDC42BPAQ5VT25 LUC7L3-223ENST00000625349 408 ntTSL 2 BASIC19.97■□□□□ 0.79
CDC42BPAQ5VT25 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC19.97■□□□□ 0.79
CDC42BPAQ5VT25 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC19.97■□□□□ 0.79
CDC42BPAQ5VT25 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC19.97■□□□□ 0.79
CDC42BPAQ5VT25 NFE2L1-218ENST00000583378 2051 ntTSL 5 BASIC19.97■□□□□ 0.79
CDC42BPAQ5VT25 PATL2-201ENST00000434130 1950 ntAPPRIS P3 TSL 5 BASIC19.97■□□□□ 0.79
CDC42BPAQ5VT25 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CDC42BPAQ5VT25 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC19.97■□□□□ 0.79
CDC42BPAQ5VT25 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CDC42BPAQ5VT25 SERPINB8-209ENST00000636430 1719 ntTSL 5 BASIC19.97■□□□□ 0.79
CDC42BPAQ5VT25 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
CDC42BPAQ5VT25 TAF11-202ENST00000420584 1465 ntTSL 2 BASIC19.97■□□□□ 0.79
CDC42BPAQ5VT25 NFATC4-212ENST00000554473 1382 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CDC42BPAQ5VT25 LINC02381-202ENST00000635070 1341 ntTSL 5 BASIC19.96■□□□□ 0.79
CDC42BPAQ5VT25 AL590428.1-201ENST00000428865 1973 ntTSL 2 BASIC19.96■□□□□ 0.79
CDC42BPAQ5VT25 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CDC42BPAQ5VT25 NHP2-201ENST00000274606 865 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CDC42BPAQ5VT25 SNCG-202ENST00000372017 701 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CDC42BPAQ5VT25 TRIM15-206ENST00000376688 426 ntTSL 5 BASIC19.96■□□□□ 0.79
CDC42BPAQ5VT25 AL391903.1-201ENST00000407513 365 ntBASIC19.96■□□□□ 0.79
CDC42BPAQ5VT25 AC006001.2-202ENST00000439360 508 ntTSL 3 BASIC19.96■□□□□ 0.79
CDC42BPAQ5VT25 PLAC9P1-203ENST00000440031 223 ntBASIC19.96■□□□□ 0.79
CDC42BPAQ5VT25 CDHR4-205ENST00000487256 1017 ntTSL 5 BASIC19.96■□□□□ 0.79
CDC42BPAQ5VT25 AC069181.1-201ENST00000498256 554 ntBASIC19.96■□□□□ 0.79
CDC42BPAQ5VT25 AC007656.1-201ENST00000552238 573 ntTSL 4 BASIC19.96■□□□□ 0.79
CDC42BPAQ5VT25 NPTN-205ENST00000563691 1214 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
CDC42BPAQ5VT25 AL390726.3-201ENST00000567428 635 ntTSL 5 BASIC19.96■□□□□ 0.79
CDC42BPAQ5VT25 AC131274.3-201ENST00000578745 1271 ntBASIC19.96■□□□□ 0.79
CDC42BPAQ5VT25 FXYD3-212ENST00000605550 590 ntTSL 4 BASIC19.96■□□□□ 0.79
CDC42BPAQ5VT25 KCNQ1OT1_1.1-201ENST00000622358 464 ntBASIC19.96■□□□□ 0.79
CDC42BPAQ5VT25 PCTP-202ENST00000325214 1856 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CDC42BPAQ5VT25 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CDC42BPAQ5VT25 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC19.96■□□□□ 0.79
CDC42BPAQ5VT25 ZSCAN16-AS1-201ENST00000600652 2163 ntTSL 2 BASIC19.96■□□□□ 0.79
CDC42BPAQ5VT25 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
CDC42BPAQ5VT25 SEC22C-205ENST00000417572 1513 ntTSL 3 BASIC19.96■□□□□ 0.79
CDC42BPAQ5VT25 NRG1-201ENST00000287842 2035 ntAPPRIS P4 TSL 1 (best) BASIC19.96■□□□□ 0.79
CDC42BPAQ5VT25 IL19-201ENST00000270218 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CDC42BPAQ5VT25 CEBPZOS-203ENST00000397226 1499 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
CDC42BPAQ5VT25 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
CDC42BPAQ5VT25 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
CDC42BPAQ5VT25 CHMP4C-201ENST00000297265 1866 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CDC42BPAQ5VT25 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CDC42BPAQ5VT25 AC027288.3-202ENST00000550268 1820 ntTSL 2 BASIC19.96■□□□□ 0.79
CDC42BPAQ5VT25 RTN3-210ENST00000540798 3124 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CDC42BPAQ5VT25 OR8J1-202ENST00000533152 1320 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
CDC42BPAQ5VT25 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC19.96■□□□□ 0.79
CDC42BPAQ5VT25 UGT1A6-202ENST00000373424 1128 ntTSL 2 BASIC19.96■□□□□ 0.79
CDC42BPAQ5VT25 MIR766-201ENST00000390223 111 ntBASIC19.96■□□□□ 0.79
CDC42BPAQ5VT25 AL137077.1-201ENST00000442115 528 ntBASIC19.96■□□□□ 0.79
CDC42BPAQ5VT25 AC002066.1-201ENST00000446355 514 ntTSL 5 BASIC19.96■□□□□ 0.79
CDC42BPAQ5VT25 VTI1BP1-201ENST00000486325 700 ntBASIC19.96■□□□□ 0.79
CDC42BPAQ5VT25 AC007622.1-201ENST00000488371 535 ntBASIC19.96■□□□□ 0.79
CDC42BPAQ5VT25 BCRP5-201ENST00000514371 253 ntBASIC19.96■□□□□ 0.79
CDC42BPAQ5VT25 AC109466.1-201ENST00000517508 804 ntTSL 4 BASIC19.96■□□□□ 0.79
CDC42BPAQ5VT25 AP003785.1-201ENST00000544959 492 ntTSL 4 BASIC19.96■□□□□ 0.79
CDC42BPAQ5VT25 AL139353.1-202ENST00000547378 474 ntAPPRIS P1 TSL 3 BASIC19.96■□□□□ 0.79
CDC42BPAQ5VT25 CIRBP-AS1-201ENST00000585832 994 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CDC42BPAQ5VT25 AC093072.1-201ENST00000589196 602 ntTSL 4 BASIC19.96■□□□□ 0.79
CDC42BPAQ5VT25 PDZRN3-AS1-202ENST00000608304 774 ntTSL 5 BASIC19.96■□□□□ 0.79
CDC42BPAQ5VT25 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
CDC42BPAQ5VT25 DDC-207ENST00000444124 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CDC42BPAQ5VT25 VRK3-205ENST00000593919 1979 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CDC42BPAQ5VT25 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
CDC42BPAQ5VT25 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
CDC42BPAQ5VT25 EVA1A-201ENST00000233712 1815 ntAPPRIS P2 TSL 2 BASIC19.95■□□□□ 0.78
CDC42BPAQ5VT25 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC19.95■□□□□ 0.78
CDC42BPAQ5VT25 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CDC42BPAQ5VT25 AL137077.2-201ENST00000635124 1608 ntBASIC19.95■□□□□ 0.78
CDC42BPAQ5VT25 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CDC42BPAQ5VT25 LILRA1-201ENST00000251372 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CDC42BPAQ5VT25 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CDC42BPAQ5VT25 BLVRA-201ENST00000265523 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CDC42BPAQ5VT25 CRYBB2-201ENST00000398215 886 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CDC42BPAQ5VT25 TACR1-202ENST00000409848 1270 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CDC42BPAQ5VT25 LINC01875-201ENST00000454477 660 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CDC42BPAQ5VT25 AL589666.1-201ENST00000503906 835 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
CDC42BPAQ5VT25 RN7SKP195-201ENST00000516587 303 ntBASIC19.95■□□□□ 0.78
CDC42BPAQ5VT25 CNOT8-217ENST00000521450 1158 ntTSL 2 BASIC19.95■□□□□ 0.78
CDC42BPAQ5VT25 NPLOC4-214ENST00000573876 560 ntTSL 4 BASIC19.95■□□□□ 0.78
CDC42BPAQ5VT25 MED11-203ENST00000575284 652 ntTSL 3 BASIC19.95■□□□□ 0.78
CDC42BPAQ5VT25 CD74-201ENST00000009530 981 ntAPPRIS P2 TSL 2 BASIC19.95■□□□□ 0.78
CDC42BPAQ5VT25 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC19.95■□□□□ 0.78
CDC42BPAQ5VT25 TAF7L-202ENST00000356784 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
CDC42BPAQ5VT25 CHRNA1-208ENST00000636168 1862 ntTSL 5 BASIC19.95■□□□□ 0.78
CDC42BPAQ5VT25 VAMP2-201ENST00000316509 2153 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
CDC42BPAQ5VT25 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
CDC42BPAQ5VT25 SLC37A3-203ENST00000447932 3254 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CDC42BPAQ5VT25 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 77.4 ms