Protein–RNA interactions for Protein: Q0VF96

CGNL1, Cingulin-like protein 1, humanhuman

Predictions only

Length 1,302 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CGNL1Q0VF96 RPA3-202ENST00000396682 847 ntAPPRIS P1 TSL 3 BASIC18.56■□□□□ 0.56
CGNL1Q0VF96 LINC01114-202ENST00000424321 2112 ntTSL 2 BASIC18.56■□□□□ 0.56
CGNL1Q0VF96 AC092810.2-201ENST00000431570 362 ntBASIC18.56■□□□□ 0.56
CGNL1Q0VF96 DDX39AP1-201ENST00000445147 1181 ntBASIC18.56■□□□□ 0.56
CGNL1Q0VF96 AC063952.3-201ENST00000467756 308 ntBASIC18.56■□□□□ 0.56
CGNL1Q0VF96 LINC00173-201ENST00000470091 435 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CGNL1Q0VF96 AL928742.1-201ENST00000497397 548 ntTSL 4 BASIC18.56■□□□□ 0.56
CGNL1Q0VF96 ALG1L7P-201ENST00000502317 768 ntBASIC18.56■□□□□ 0.56
CGNL1Q0VF96 UBR5-AS1-202ENST00000520820 800 ntTSL 2 BASIC18.56■□□□□ 0.56
CGNL1Q0VF96 AC011451.3-201ENST00000634951 582 ntTSL 3 BASIC18.56■□□□□ 0.56
CGNL1Q0VF96 OSMR-AS1-204ENST00000636516 850 ntTSL 5 BASIC18.56■□□□□ 0.56
CGNL1Q0VF96 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
CGNL1Q0VF96 APOBEC3D-202ENST00000427494 1961 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CGNL1Q0VF96 ALG11-204ENST00000616513 1983 ntTSL 2 BASIC18.56■□□□□ 0.56
CGNL1Q0VF96 PCTP-207ENST00000576183 2680 ntTSL 3 BASIC18.56■□□□□ 0.56
CGNL1Q0VF96 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
CGNL1Q0VF96 LINC01873-201ENST00000428647 1679 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CGNL1Q0VF96 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
CGNL1Q0VF96 ERICH6-201ENST00000295910 2052 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
CGNL1Q0VF96 FKBP4P8-201ENST00000610931 1369 ntBASIC18.56■□□□□ 0.56
CGNL1Q0VF96 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
CGNL1Q0VF96 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC18.56■□□□□ 0.56
CGNL1Q0VF96 TNFSF13-203ENST00000380535 2195 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CGNL1Q0VF96 MDM1-205ENST00000430606 2170 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CGNL1Q0VF96 PPP1R13L-201ENST00000360957 3104 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CGNL1Q0VF96 GDPD5-215ENST00000533805 2424 ntTSL 2 BASIC18.56■□□□□ 0.56
CGNL1Q0VF96 SFSWAP-210ENST00000541286 3219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
CGNL1Q0VF96 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
CGNL1Q0VF96 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
CGNL1Q0VF96 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
CGNL1Q0VF96 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CGNL1Q0VF96 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
CGNL1Q0VF96 SNCAIP-206ENST00000414317 1591 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CGNL1Q0VF96 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CGNL1Q0VF96 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC18.55■□□□□ 0.56
CGNL1Q0VF96 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CGNL1Q0VF96 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CGNL1Q0VF96 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
CGNL1Q0VF96 DUOXA1-205ENST00000558422 1678 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CGNL1Q0VF96 NRROS-201ENST00000328557 2564 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CGNL1Q0VF96 KRBA2-202ENST00000396267 2562 ntTSL 2 BASIC18.55■□□□□ 0.56
CGNL1Q0VF96 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
CGNL1Q0VF96 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CGNL1Q0VF96 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
CGNL1Q0VF96 C11orf53-201ENST00000280325 1208 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
CGNL1Q0VF96 MIR566-201ENST00000385187 94 ntBASIC18.55■□□□□ 0.56
CGNL1Q0VF96 SLC12A9-AS1-201ENST00000412754 369 ntTSL 3 BASIC18.55■□□□□ 0.56
CGNL1Q0VF96 MED19-202ENST00000431606 1203 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CGNL1Q0VF96 FAU-202ENST00000434372 533 ntTSL 2 BASIC18.55■□□□□ 0.56
CGNL1Q0VF96 AL353150.1-201ENST00000456944 583 ntTSL 2 BASIC18.55■□□□□ 0.56
CGNL1Q0VF96 RPL29P2-202ENST00000498671 657 ntBASIC18.55■□□□□ 0.56
CGNL1Q0VF96 AC026191.1-204ENST00000517846 608 ntTSL 3 BASIC18.55■□□□□ 0.56
CGNL1Q0VF96 PIGCP1-201ENST00000527583 895 ntBASIC18.55■□□□□ 0.56
CGNL1Q0VF96 AC009779.3-204ENST00000549424 367 ntTSL 3 BASIC18.55■□□□□ 0.56
CGNL1Q0VF96 AC068831.5-201ENST00000557387 328 ntBASIC18.55■□□□□ 0.56
CGNL1Q0VF96 HNRNPA1P5-201ENST00000558213 966 ntBASIC18.55■□□□□ 0.56
CGNL1Q0VF96 RN7SL134P-201ENST00000579756 303 ntBASIC18.55■□□□□ 0.56
CGNL1Q0VF96 AL160191.2-201ENST00000603975 601 ntBASIC18.55■□□□□ 0.56
CGNL1Q0VF96 AC005274.1-201ENST00000623460 802 ntBASIC18.55■□□□□ 0.56
CGNL1Q0VF96 ADAM33-207ENST00000619289 3195 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CGNL1Q0VF96 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
CGNL1Q0VF96 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CGNL1Q0VF96 CCDC86-201ENST00000227520 1893 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
CGNL1Q0VF96 SRA1-201ENST00000336283 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CGNL1Q0VF96 BIRC2-208ENST00000532672 2617 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
CGNL1Q0VF96 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CGNL1Q0VF96 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CGNL1Q0VF96 KRT26-201ENST00000335552 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CGNL1Q0VF96 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC18.55■□□□□ 0.56
CGNL1Q0VF96 OSBPL1A-201ENST00000319481 4195 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CGNL1Q0VF96 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CGNL1Q0VF96 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
CGNL1Q0VF96 SSTR1-201ENST00000267377 4295 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
CGNL1Q0VF96 LDB3-204ENST00000372066 1598 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CGNL1Q0VF96 AC009474.1-201ENST00000455096 1565 ntBASIC18.55■□□□□ 0.56
CGNL1Q0VF96 DHRS7-209ENST00000557185 1322 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CGNL1Q0VF96 RECQL5-218ENST00000584999 1922 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CGNL1Q0VF96 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
CGNL1Q0VF96 ARHGEF26-202ENST00000465093 3929 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CGNL1Q0VF96 NAALADL1-201ENST00000340252 2376 ntTSL 5 BASIC18.55■□□□□ 0.56
CGNL1Q0VF96 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC18.54■□□□□ 0.56
CGNL1Q0VF96 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
CGNL1Q0VF96 SVOPL-202ENST00000419765 1523 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
CGNL1Q0VF96 CPN1-201ENST00000370418 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CGNL1Q0VF96 RNF121-211ENST00000530137 2202 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CGNL1Q0VF96 EPB42-210ENST00000622454 2227 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CGNL1Q0VF96 MAPT-IT1-201ENST00000624111 3016 ntBASIC18.54■□□□□ 0.56
CGNL1Q0VF96 MRPL33-201ENST00000296102 518 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CGNL1Q0VF96 HIST1H2BJ-201ENST00000339812 381 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
CGNL1Q0VF96 TSC22D3-202ENST00000372382 1216 ntTSL 3 BASIC18.54■□□□□ 0.56
CGNL1Q0VF96 MRPL33-202ENST00000379666 404 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CGNL1Q0VF96 GEMIN8P4-201ENST00000380526 729 ntBASIC18.54■□□□□ 0.56
CGNL1Q0VF96 DIO1-203ENST00000388876 606 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CGNL1Q0VF96 CTHRC1-202ENST00000415886 571 ntTSL 2 BASIC18.54■□□□□ 0.56
CGNL1Q0VF96 AL157392.3-204ENST00000440878 397 ntTSL 3 BASIC18.54■□□□□ 0.56
CGNL1Q0VF96 AL662797.1-201ENST00000442852 799 ntTSL 3 BASIC18.54■□□□□ 0.56
CGNL1Q0VF96 HMGB3-204ENST00000448905 812 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
CGNL1Q0VF96 AC012213.1-201ENST00000517376 722 ntTSL 3 BASIC18.54■□□□□ 0.56
CGNL1Q0VF96 DIO1-204ENST00000524406 626 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CGNL1Q0VF96 DIO1-213ENST00000532493 406 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 52.8 ms