Protein–RNA interactions for Protein: P84022

SMAD3, Mothers against decapentaplegic homolog 3, humanhuman

Known RBP Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3P84022 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
SMAD3P84022 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SMAD3P84022 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
SMAD3P84022 KCP-203ENST00000610776 5108 ntTSL 5 BASIC14.74□□□□□ -0.05
SMAD3P84022 PRDX2-202ENST00000334482 784 ntTSL 3 BASIC14.74□□□□□ -0.05
SMAD3P84022 UBIAD1-201ENST00000376804 825 ntTSL 2 BASIC14.74□□□□□ -0.05
SMAD3P84022 SUMO1-202ENST00000392245 1071 ntAPPRIS P1 TSL 3 BASIC14.74□□□□□ -0.05
SMAD3P84022 MB-204ENST00000401702 1043 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
SMAD3P84022 AP005273.1-201ENST00000444862 522 ntTSL 3 BASIC14.74□□□□□ -0.05
SMAD3P84022 CDHR4-205ENST00000487256 1017 ntTSL 5 BASIC14.74□□□□□ -0.05
SMAD3P84022 AC104117.4-201ENST00000521486 847 ntBASIC14.74□□□□□ -0.05
SMAD3P84022 PEX11A-204ENST00000561224 529 ntTSL 4 BASIC14.74□□□□□ -0.05
SMAD3P84022 NPTN-205ENST00000563691 1214 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
SMAD3P84022 AC090282.1-201ENST00000572821 534 ntTSL 3 BASIC14.74□□□□□ -0.05
SMAD3P84022 MIR4309-201ENST00000582498 83 ntBASIC14.74□□□□□ -0.05
SMAD3P84022 SEPT14P19-201ENST00000587432 336 ntTSL 2 BASIC14.74□□□□□ -0.05
SMAD3P84022 AC138150.1-201ENST00000589950 570 ntTSL 4 BASIC14.74□□□□□ -0.05
SMAD3P84022 AC005332.2-201ENST00000590010 930 ntBASIC14.74□□□□□ -0.05
SMAD3P84022 LUC7L3-223ENST00000625349 408 ntTSL 2 BASIC14.74□□□□□ -0.05
SMAD3P84022 AC008993.3-201ENST00000633603 631 ntTSL 5 BASIC14.74□□□□□ -0.05
SMAD3P84022 ERAS-202ENST00000636362 826 ntAPPRIS P1 TSL 3 BASIC14.74□□□□□ -0.05
SMAD3P84022 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
SMAD3P84022 ZNF460-202ENST00000537645 2037 ntTSL 2 BASIC14.74□□□□□ -0.05
SMAD3P84022 SAP18-201ENST00000382533 2298 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
SMAD3P84022 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC14.74□□□□□ -0.05
SMAD3P84022 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SMAD3P84022 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
SMAD3P84022 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
SMAD3P84022 POU2F2-204ENST00000526816 3218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
SMAD3P84022 RNF121-211ENST00000530137 2202 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
SMAD3P84022 DPH2-202ENST00000396758 1738 ntTSL 3 BASIC14.74□□□□□ -0.05
SMAD3P84022 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
SMAD3P84022 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SMAD3P84022 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
SMAD3P84022 NME1-209ENST00000511355 1645 ntTSL 5 BASIC14.74□□□□□ -0.05
SMAD3P84022 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SMAD3P84022 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
SMAD3P84022 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
SMAD3P84022 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
SMAD3P84022 USP28-214ENST00000545540 3431 ntTSL 2 BASIC14.73□□□□□ -0.05
SMAD3P84022 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SMAD3P84022 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
SMAD3P84022 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
SMAD3P84022 SNRPN-205ENST00000400100 1751 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SMAD3P84022 SLC6A2-205ENST00000566163 1759 ntTSL 5 BASIC14.73□□□□□ -0.05
SMAD3P84022 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
SMAD3P84022 ABLIM2-215ENST00000545242 1972 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
SMAD3P84022 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC14.73□□□□□ -0.05
SMAD3P84022 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
SMAD3P84022 LINC00967-203ENST00000518035 1502 ntTSL 2 BASIC14.73□□□□□ -0.05
SMAD3P84022 C2orf68-201ENST00000306336 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SMAD3P84022 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SMAD3P84022 PHTF2-204ENST00000415251 1738 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
SMAD3P84022 CPA5-206ENST00000474905 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SMAD3P84022 LXN-201ENST00000264265 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SMAD3P84022 SMIM4-201ENST00000307106 274 ntTSL 2 BASIC14.73□□□□□ -0.05
SMAD3P84022 HIGD2B-201ENST00000311755 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SMAD3P84022 SGCA-202ENST00000344627 1057 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
SMAD3P84022 RPLP1-202ENST00000357790 445 ntTSL 2 BASIC14.73□□□□□ -0.05
SMAD3P84022 PIGL-202ENST00000395844 1257 ntTSL 5 BASIC14.73□□□□□ -0.05
SMAD3P84022 RBMX2P5-201ENST00000424312 969 ntBASIC14.73□□□□□ -0.05
SMAD3P84022 ZBTB46-AS1-201ENST00000435912 533 ntTSL 3 BASIC14.73□□□□□ -0.05
SMAD3P84022 AC108879.1-201ENST00000438026 828 ntTSL 3 BASIC14.73□□□□□ -0.05
SMAD3P84022 AC139143.1-201ENST00000441772 1207 ntBASIC14.73□□□□□ -0.05
SMAD3P84022 PSMB8-AS1-206ENST00000458296 958 ntTSL 3 BASIC14.73□□□□□ -0.05
SMAD3P84022 AC008021.1-201ENST00000474180 414 ntBASIC14.73□□□□□ -0.05
SMAD3P84022 RN7SL47P-201ENST00000488710 299 ntBASIC14.73□□□□□ -0.05
SMAD3P84022 SMAD1-AS1-201ENST00000513542 481 ntTSL 2 BASIC14.73□□□□□ -0.05
SMAD3P84022 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
SMAD3P84022 MIR4326-201ENST00000582203 59 ntBASIC14.73□□□□□ -0.05
SMAD3P84022 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
SMAD3P84022 BCAS4-206ENST00000609336 787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
SMAD3P84022 HIST1H3E-201ENST00000614911 462 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
SMAD3P84022 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC14.73□□□□□ -0.05
SMAD3P84022 AC245369.8-201ENST00000636589 306 ntBASIC14.73□□□□□ -0.05
SMAD3P84022 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
SMAD3P84022 SALL2-205ENST00000611430 1466 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
SMAD3P84022 SIGLEC9-201ENST00000250360 1690 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
SMAD3P84022 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SMAD3P84022 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC14.73□□□□□ -0.05
SMAD3P84022 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC14.73□□□□□ -0.05
SMAD3P84022 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
SMAD3P84022 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
SMAD3P84022 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SMAD3P84022 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SMAD3P84022 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC14.73□□□□□ -0.05
SMAD3P84022 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC14.73□□□□□ -0.05
SMAD3P84022 LINC01658-201ENST00000320372 1578 ntTSL 2 BASIC14.73□□□□□ -0.05
SMAD3P84022 TUBB2A-201ENST00000333628 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SMAD3P84022 CLP1-202ENST00000525602 1392 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SMAD3P84022 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SMAD3P84022 CLTCL1-212ENST00000622493 1714 ntTSL 2 BASIC14.72□□□□□ -0.05
SMAD3P84022 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC14.72□□□□□ -0.05
SMAD3P84022 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SMAD3P84022 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
SMAD3P84022 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
SMAD3P84022 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
SMAD3P84022 AC015712.6-201ENST00000431060 5068 ntTSL 2 BASIC14.72□□□□□ -0.05
SMAD3P84022 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
SMAD3P84022 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC14.72□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms