Protein–RNA interactions for Protein: P78415

IRX3, Iroquois-class homeodomain protein IRX-3, humanhuman

Predicted RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX3P78415 GULP1-207ENST00000409843 2643 ntAPPRIS ALT1 TSL 2 BASIC16.15■□□□□ 0.18
IRX3P78415 PPT1-213ENST00000641319 2388 ntBASIC16.15■□□□□ 0.18
IRX3P78415 SPAAR-203ENST00000636776 1538 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
IRX3P78415 LINC00863-201ENST00000439559 3287 ntTSL 5 BASIC16.15■□□□□ 0.18
IRX3P78415 BABAM2-204ENST00000379624 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
IRX3P78415 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
IRX3P78415 ITGB4-202ENST00000449880 5689 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
IRX3P78415 RBSN-207ENST00000476527 3005 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
IRX3P78415 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
IRX3P78415 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
IRX3P78415 UPK1A-201ENST00000222275 1223 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
IRX3P78415 TNNI2-201ENST00000252898 678 ntAPPRIS P3 TSL 3 BASIC16.15■□□□□ 0.18
IRX3P78415 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC16.15■□□□□ 0.18
IRX3P78415 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
IRX3P78415 NDUFB6-202ENST00000366466 761 ntTSL 2 BASIC16.15■□□□□ 0.18
IRX3P78415 PIFO-201ENST00000369737 746 ntTSL 2 BASIC16.15■□□□□ 0.18
IRX3P78415 XPNPEP2-201ENST00000371105 912 ntTSL 2 BASIC16.15■□□□□ 0.18
IRX3P78415 LST1-204ENST00000376086 554 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
IRX3P78415 UPK1A-202ENST00000379013 1016 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
IRX3P78415 TNNI2-202ENST00000381905 706 ntAPPRIS ALT1 TSL 3 BASIC16.15■□□□□ 0.18
IRX3P78415 TNNI2-203ENST00000381906 745 ntAPPRIS P3 TSL 3 BASIC16.15■□□□□ 0.18
IRX3P78415 TNNI2-204ENST00000381911 743 ntAPPRIS P3 TSL 2 BASIC16.15■□□□□ 0.18
IRX3P78415 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC16.15■□□□□ 0.18
IRX3P78415 WASIR1-201ENST00000399966 1054 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
IRX3P78415 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
IRX3P78415 VPREB1-202ENST00000403807 755 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
IRX3P78415 ACTN4-203ENST00000424234 1566 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
IRX3P78415 AL022332.1-202ENST00000432495 426 ntTSL 3 BASIC16.15■□□□□ 0.18
IRX3P78415 AL512622.1-202ENST00000443922 478 ntTSL 3 BASIC16.15■□□□□ 0.18
IRX3P78415 C16orf45-202ENST00000452191 1865 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
IRX3P78415 AC107464.2-201ENST00000502923 569 ntTSL 2 BASIC16.15■□□□□ 0.18
IRX3P78415 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
IRX3P78415 AC092862.1-201ENST00000541534 533 ntBASIC16.15■□□□□ 0.18
IRX3P78415 AC011603.2-203ENST00000547387 897 ntTSL 3 BASIC16.15■□□□□ 0.18
IRX3P78415 AC018761.2-201ENST00000585496 296 ntTSL 3 BASIC16.15■□□□□ 0.18
IRX3P78415 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC16.15■□□□□ 0.18
IRX3P78415 SCGB1B2P-201ENST00000595013 612 ntTSL 2 BASIC16.15■□□□□ 0.18
IRX3P78415 SNAPC2-206ENST00000597584 1413 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
IRX3P78415 AC018695.6-201ENST00000614011 534 ntBASIC16.15■□□□□ 0.18
IRX3P78415 ADPRHL1-204ENST00000612156 9759 ntTSL 5 BASIC16.15■□□□□ 0.18
IRX3P78415 C2orf68-201ENST00000306336 2837 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
IRX3P78415 GRWD1-201ENST00000253237 5571 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
IRX3P78415 ZNF436-AS1-201ENST00000335648 2547 ntBASIC16.15■□□□□ 0.18
IRX3P78415 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC16.15■□□□□ 0.18
IRX3P78415 FBXO34-201ENST00000313833 3464 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
IRX3P78415 YIPF6-204ENST00000462683 6741 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
IRX3P78415 DACT3-AS1-201ENST00000500689 1304 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
IRX3P78415 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
IRX3P78415 AC015909.5-201ENST00000624336 2266 ntBASIC16.15■□□□□ 0.18
IRX3P78415 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC16.15■□□□□ 0.18
IRX3P78415 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
IRX3P78415 KLHL34-201ENST00000379499 3641 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
IRX3P78415 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
IRX3P78415 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
IRX3P78415 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC16.14■□□□□ 0.17
IRX3P78415 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC16.14■□□□□ 0.17
IRX3P78415 PGD-201ENST00000270776 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
IRX3P78415 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
IRX3P78415 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
IRX3P78415 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
IRX3P78415 SGCA-201ENST00000262018 1432 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
IRX3P78415 TARBP2-202ENST00000394357 1402 ntTSL 3 BASIC16.14■□□□□ 0.17
IRX3P78415 CERCAM-214ENST00000613052 1429 ntTSL 5 BASIC16.14■□□□□ 0.17
IRX3P78415 CASKIN2-202ENST00000433559 3950 ntTSL 2 BASIC16.14■□□□□ 0.17
IRX3P78415 G0S2-201ENST00000367029 866 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
IRX3P78415 RPRD2-201ENST00000369067 1043 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
IRX3P78415 S100A13-203ENST00000392623 579 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
IRX3P78415 RBM4-203ENST00000398692 921 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
IRX3P78415 MIR1307-201ENST00000408840 149 ntBASIC16.14■□□□□ 0.17
IRX3P78415 IFI35-203ENST00000415816 1241 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
IRX3P78415 LINP1-201ENST00000417112 917 ntTSL 2 BASIC16.14■□□□□ 0.17
IRX3P78415 LINC01523-201ENST00000425385 450 ntTSL 2 BASIC16.14■□□□□ 0.17
IRX3P78415 AL929302.1-201ENST00000426556 871 ntBASIC16.14■□□□□ 0.17
IRX3P78415 LRRC3-AS1-201ENST00000426578 784 ntTSL 3 BASIC16.14■□□□□ 0.17
IRX3P78415 SLC5A4-AS1-201ENST00000434942 876 ntTSL 3 BASIC16.14■□□□□ 0.17
IRX3P78415 IFI35-204ENST00000438323 1232 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
IRX3P78415 AL451000.1-201ENST00000451300 1186 ntBASIC16.14■□□□□ 0.17
IRX3P78415 AC073094.1-201ENST00000453798 433 ntTSL 2 BASIC16.14■□□□□ 0.17
IRX3P78415 AC092903.1-201ENST00000466506 262 ntBASIC16.14■□□□□ 0.17
IRX3P78415 CALCA-205ENST00000486207 851 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
IRX3P78415 RBM4-207ENST00000506523 654 ntTSL 3 BASIC16.14■□□□□ 0.17
IRX3P78415 TPP1-209ENST00000528657 578 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
IRX3P78415 EHF-208ENST00000530286 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
IRX3P78415 CR383656.13-201ENST00000550928 563 ntTSL 3 BASIC16.14■□□□□ 0.17
IRX3P78415 ALG10B-203ENST00000551464 571 ntTSL 3 BASIC16.14■□□□□ 0.17
IRX3P78415 AL512310.10-201ENST00000555580 563 ntTSL 3 BASIC16.14■□□□□ 0.17
IRX3P78415 TYMSP2-201ENST00000589501 424 ntBASIC16.14■□□□□ 0.17
IRX3P78415 AL078590.3-205ENST00000606039 465 ntTSL 5 BASIC16.14■□□□□ 0.17
IRX3P78415 ASNA1-205ENST00000611688 1214 ntTSL 5 BASIC16.14■□□□□ 0.17
IRX3P78415 AP000356.3-203ENST00000614808 601 ntTSL 3 BASIC16.14■□□□□ 0.17
IRX3P78415 PSMA6-215ENST00000622405 978 ntTSL 2 BASIC16.14■□□□□ 0.17
IRX3P78415 PSMA6-217ENST00000628955 364 ntTSL 5 BASIC16.14■□□□□ 0.17
IRX3P78415 OSMR-AS1-204ENST00000636516 850 ntTSL 5 BASIC16.14■□□□□ 0.17
IRX3P78415 AC068760.1-201ENST00000493579 1953 ntBASIC16.14■□□□□ 0.17
IRX3P78415 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
IRX3P78415 AMER2-201ENST00000357816 10055 ntTSL 2 BASIC16.14■□□□□ 0.17
IRX3P78415 FAM120B-205ENST00000630384 3721 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
IRX3P78415 HCFC2-201ENST00000229330 5734 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
IRX3P78415 LAMP5-202ENST00000427562 1309 ntTSL 2 BASIC16.14■□□□□ 0.17
IRX3P78415 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC16.14■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 53.6 ms