Protein–RNA interactions for Protein: P51686

CCR9, C-C chemokine receptor type 9, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCR9P51686 TTC39B-201ENST00000297615 3053 ntAPPRIS ALT2 TSL 2 BASIC12.21□□□□□ -0.46
CCR9P51686 OCA2-201ENST00000353809 3068 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
CCR9P51686 DGKZ-216ENST00000528615 2692 ntTSL 5 BASIC12.21□□□□□ -0.46
CCR9P51686 RERE-212ENST00000476556 4598 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
CCR9P51686 AC138761.4-201ENST00000578881 1514 ntTSL 3 BASIC12.21□□□□□ -0.46
CCR9P51686 MSH6-214ENST00000616033 3429 ntTSL 5 BASIC12.21□□□□□ -0.46
CCR9P51686 SRP54-201ENST00000216774 2279 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
CCR9P51686 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
CCR9P51686 FAM90A11P-201ENST00000518378 2218 ntBASIC12.21□□□□□ -0.46
CCR9P51686 MYRF-202ENST00000278836 5927 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
CCR9P51686 VAMP4-201ENST00000236192 5159 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
CCR9P51686 INCENP-201ENST00000278849 3698 ntAPPRIS P3 TSL 5 BASIC12.21□□□□□ -0.46
CCR9P51686 BRD7P5-201ENST00000299197 1822 ntBASIC12.21□□□□□ -0.46
CCR9P51686 PPT1-204ENST00000439754 2195 ntTSL 3 BASIC12.2□□□□□ -0.46
CCR9P51686 ADGRG6-202ENST00000296932 6849 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
CCR9P51686 EFHC1-227ENST00000637089 2133 ntTSL 5 BASIC12.2□□□□□ -0.46
CCR9P51686 CCDC144NL-201ENST00000327925 2806 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CCR9P51686 TAX1BP1-207ENST00000433216 3174 ntTSL 2 BASIC12.2□□□□□ -0.46
CCR9P51686 SPCS3-201ENST00000503362 4571 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CCR9P51686 DLGAP1-203ENST00000400147 5258 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
CCR9P51686 DLGAP1-206ENST00000400155 5257 ntTSL 2 BASIC12.2□□□□□ -0.46
CCR9P51686 PPP1R15B-201ENST00000367188 5227 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CCR9P51686 SERPINA13P-201ENST00000469935 1718 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
CCR9P51686 L2HGDH-201ENST00000261699 1377 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
CCR9P51686 RPL18A-205ENST00000600147 1391 ntTSL 5 BASIC12.2□□□□□ -0.46
CCR9P51686 ALDH9A1-201ENST00000354775 2696 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CCR9P51686 PAX8-203ENST00000348715 3966 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
CCR9P51686 RALGAPA1-201ENST00000307138 7911 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CCR9P51686 MAP7D2-202ENST00000379651 3930 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
CCR9P51686 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CCR9P51686 FAM76A-204ENST00000373954 3567 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
CCR9P51686 ARRDC5-201ENST00000381781 1638 ntAPPRIS P1 TSL 3 BASIC12.2□□□□□ -0.46
CCR9P51686 AC020763.3-201ENST00000625095 2904 ntBASIC12.2□□□□□ -0.46
CCR9P51686 SMC6-201ENST00000351948 5173 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CCR9P51686 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CCR9P51686 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CCR9P51686 GAPDH-203ENST00000396858 1292 ntTSL 5 BASIC12.2□□□□□ -0.46
CCR9P51686 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
CCR9P51686 AL139125.1-201ENST00000420395 557 ntTSL 3 BASIC12.2□□□□□ -0.46
CCR9P51686 NME2P1-201ENST00000426182 414 ntBASIC12.2□□□□□ -0.46
CCR9P51686 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC12.2□□□□□ -0.46
CCR9P51686 AL109924.1-201ENST00000444586 914 ntTSL 3 BASIC12.2□□□□□ -0.46
CCR9P51686 HSPB1P2-201ENST00000448722 546 ntBASIC12.2□□□□□ -0.46
CCR9P51686 ATP6V0CP2-201ENST00000469409 207 ntBASIC12.2□□□□□ -0.46
CCR9P51686 OARD1-212ENST00000482515 832 ntTSL 2 BASIC12.2□□□□□ -0.46
CCR9P51686 AC021723.1-201ENST00000486306 515 ntBASIC12.2□□□□□ -0.46
CCR9P51686 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC12.2□□□□□ -0.46
CCR9P51686 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC12.2□□□□□ -0.46
CCR9P51686 SNHG21-204ENST00000559366 674 ntTSL 2 BASIC12.2□□□□□ -0.46
CCR9P51686 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC12.2□□□□□ -0.46
CCR9P51686 AC093752.3-201ENST00000567343 901 ntBASIC12.2□□□□□ -0.46
CCR9P51686 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC12.2□□□□□ -0.46
CCR9P51686 MIR3615-201ENST00000581999 87 ntBASIC12.2□□□□□ -0.46
CCR9P51686 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
CCR9P51686 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CCR9P51686 NPPA-203ENST00000610706 849 ntAPPRIS ALT1 TSL 5 BASIC12.2□□□□□ -0.46
CCR9P51686 DSE-201ENST00000331677 7237 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
CCR9P51686 LINC01662-201ENST00000342888 1859 ntTSL 2 BASIC12.2□□□□□ -0.46
CCR9P51686 PRUNE1-205ENST00000368937 1850 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
CCR9P51686 SLC6A9-205ENST00000372310 3130 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
CCR9P51686 DRD2-208ENST00000542968 2467 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
CCR9P51686 CNP-202ENST00000393892 5217 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CCR9P51686 GLIS3-202ENST00000381971 3961 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
CCR9P51686 NR1H3-201ENST00000395397 1501 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
CCR9P51686 AC009542.1-201ENST00000412549 1810 ntTSL 2 BASIC12.2□□□□□ -0.46
CCR9P51686 TRIM3-203ENST00000525074 3044 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
CCR9P51686 WTH3DI-201ENST00000623617 3032 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
CCR9P51686 NEK3-205ENST00000610828 2396 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
CCR9P51686 NIT1-202ENST00000368008 2081 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
CCR9P51686 AC004554.1-201ENST00000422830 1468 ntBASIC12.2□□□□□ -0.46
CCR9P51686 LINC00969-231ENST00000597482 1476 ntTSL 5 BASIC12.2□□□□□ -0.46
CCR9P51686 ZNF197-204ENST00000383745 2935 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
CCR9P51686 MORN4-201ENST00000307450 2315 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CCR9P51686 MYO16-202ENST00000356711 6874 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
CCR9P51686 MAOA-204ENST00000542639 5438 ntTSL 2 BASIC12.2□□□□□ -0.46
CCR9P51686 AC021218.1-201ENST00000377722 2536 ntTSL 2 BASIC12.19□□□□□ -0.46
CCR9P51686 PLA2G6-202ENST00000335539 3060 ntTSL 5 BASIC12.19□□□□□ -0.46
CCR9P51686 NDRG4-201ENST00000258187 3324 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
CCR9P51686 STAT6-202ENST00000454075 3037 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
CCR9P51686 SETD1B-202ENST00000542440 8185 ntAPPRIS P2 TSL 5 BASIC12.19□□□□□ -0.46
CCR9P51686 PLAT-211ENST00000524009 1613 ntTSL 2 BASIC12.19□□□□□ -0.46
CCR9P51686 KCNMA1-210ENST00000404771 4014 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
CCR9P51686 CARHSP1-218ENST00000614449 2931 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
CCR9P51686 FAM86C1-202ENST00000359244 2110 ntAPPRIS ALT2 TSL 2 BASIC12.19□□□□□ -0.46
CCR9P51686 HNRNPH1-216ENST00000510411 2105 ntTSL 5 BASIC12.19□□□□□ -0.46
CCR9P51686 CASC4-201ENST00000299957 3962 ntAPPRIS P4 TSL 1 (best) BASIC12.19□□□□□ -0.46
CCR9P51686 FXYD3-208ENST00000604404 1322 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CCR9P51686 POLD1-201ENST00000440232 3444 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CCR9P51686 SHISA5-206ENST00000426002 1839 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CCR9P51686 PCDHB9-201ENST00000316105 4415 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
CCR9P51686 NCAPG-201ENST00000251496 4661 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CCR9P51686 SLC25A17-217ENST00000544408 2060 ntTSL 2 BASIC12.19□□□□□ -0.46
CCR9P51686 KIF3A-208ENST00000618515 3333 ntTSL 5 BASIC12.19□□□□□ -0.46
CCR9P51686 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
CCR9P51686 SH3BGRL3-202ENST00000319041 768 ntTSL 2 BASIC12.19□□□□□ -0.46
CCR9P51686 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
CCR9P51686 BAX-205ENST00000391871 687 ntTSL 5 BASIC12.19□□□□□ -0.46
CCR9P51686 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
CCR9P51686 AC007279.1-201ENST00000448547 837 ntBASIC12.19□□□□□ -0.46
CCR9P51686 OAZ3-203ENST00000453029 729 ntTSL 5 BASIC12.19□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms