Protein–RNA interactions for Protein: P50416

CPT1A, Carnitine O-palmitoyltransferase 1, liver isoform, humanhuman

Predictions only

Length 773 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1AP50416 AL136295.3-201ENST00000558325 850 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
CPT1AP50416 AC105133.1-201ENST00000559749 742 ntTSL 3 BASIC15.09■□□□□ 0.01
CPT1AP50416 AC090282.1-201ENST00000572821 534 ntTSL 3 BASIC15.09■□□□□ 0.01
CPT1AP50416 AC003070.1-201ENST00000592389 457 ntTSL 2 BASIC15.09■□□□□ 0.01
CPT1AP50416 USE1-207ENST00000596136 637 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CPT1AP50416 MDC1-209ENST00000613547 830 ntTSL 5 BASIC15.09■□□□□ 0.01
CPT1AP50416 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC15.09■□□□□ 0.01
CPT1AP50416 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC15.09■□□□□ 0.01
CPT1AP50416 LINC00969-321ENST00000629990 806 ntTSL 5 BASIC15.09■□□□□ 0.01
CPT1AP50416 SFTPA2-205ENST00000640627 195 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CPT1AP50416 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC15.09■□□□□ 0.01
CPT1AP50416 SUCO-201ENST00000263688 5556 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CPT1AP50416 CSF3-204ENST00000394149 1583 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
CPT1AP50416 MTSS1-216ENST00000524090 2166 ntTSL 2 BASIC15.09■□□□□ 0.01
CPT1AP50416 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC15.09■□□□□ 0.01
CPT1AP50416 RNF41-202ENST00000394013 2452 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CPT1AP50416 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC15.09■□□□□ 0.01
CPT1AP50416 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
CPT1AP50416 CKAP2-202ENST00000378034 1972 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
CPT1AP50416 MIF4GD-201ENST00000245551 1358 ntTSL 3 BASIC15.09■□□□□ 0.01
CPT1AP50416 SEMA7A-202ENST00000542748 3228 ntTSL 5 BASIC15.09■□□□□ 0.01
CPT1AP50416 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CPT1AP50416 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CPT1AP50416 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
CPT1AP50416 LINC02347-203ENST00000540774 1442 ntTSL 5 BASIC15.09■□□□□ 0.01
CPT1AP50416 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
CPT1AP50416 GIT2-201ENST00000320063 2094 ntTSL 5 BASIC15.08■□□□□ 0.01
CPT1AP50416 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
CPT1AP50416 OASL-202ENST00000339275 1492 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
CPT1AP50416 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC15.08■□□□□ 0.01
CPT1AP50416 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
CPT1AP50416 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
CPT1AP50416 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CPT1AP50416 MTCL1-202ENST00000359865 6093 ntAPPRIS P2 TSL 2 BASIC15.08■□□□□ 0
CPT1AP50416 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CPT1AP50416 GGT1-203ENST00000400382 2628 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
CPT1AP50416 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC15.08■□□□□ 0
CPT1AP50416 GRIA3-208ENST00000620581 2991 ntTSL 1 (best) BASIC15.08■□□□□ 0
CPT1AP50416 USP3-204ENST00000540797 5474 ntTSL 2 BASIC15.08■□□□□ 0
CPT1AP50416 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
CPT1AP50416 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC15.08■□□□□ 0
CPT1AP50416 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
CPT1AP50416 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CPT1AP50416 AC099063.4-201ENST00000641099 1602 ntBASIC15.08■□□□□ 0
CPT1AP50416 TRBV5-7-201ENST00000390378 343 ntAPPRIS P1 BASIC15.08■□□□□ 0
CPT1AP50416 TOMM5-203ENST00000401811 789 ntTSL 2 BASIC15.08■□□□□ 0
CPT1AP50416 AL357079.1-203ENST00000412378 494 ntTSL 5 BASIC15.08■□□□□ 0
CPT1AP50416 PRKAR2A-AS1-203ENST00000431705 592 ntTSL 4 BASIC15.08■□□□□ 0
CPT1AP50416 CUTA-204ENST00000440279 822 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
CPT1AP50416 ALG1L15P-201ENST00000482834 794 ntBASIC15.08■□□□□ 0
CPT1AP50416 RN7SL523P-201ENST00000484401 298 ntBASIC15.08■□□□□ 0
CPT1AP50416 TIMM10-202ENST00000525158 530 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
CPT1AP50416 RAB11B-205ENST00000601897 577 ntTSL 3 BASIC15.08■□□□□ 0
CPT1AP50416 PTPN20CP-201ENST00000614090 920 ntBASIC15.08■□□□□ 0
CPT1AP50416 HIST1H3E-201ENST00000614911 462 ntAPPRIS P1 BASIC15.08■□□□□ 0
CPT1AP50416 AC020904.3-201ENST00000624199 442 ntBASIC15.08■□□□□ 0
CPT1AP50416 AC005609.5-201ENST00000624712 1053 ntTSL 1 (best) BASIC15.08■□□□□ 0
CPT1AP50416 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
CPT1AP50416 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC15.08■□□□□ 0
CPT1AP50416 TFG-208ENST00000490574 1696 ntAPPRIS P3 TSL 3 BASIC15.08■□□□□ 0
CPT1AP50416 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
CPT1AP50416 PRMT2-216ENST00000621201 1301 ntTSL 5 BASIC15.08■□□□□ 0
CPT1AP50416 SERPINA13P-201ENST00000469935 1718 ntTSL 1 (best) BASIC15.08■□□□□ 0
CPT1AP50416 CTRL-205ENST00000574481 1721 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CPT1AP50416 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CPT1AP50416 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC15.08■□□□□ 0
CPT1AP50416 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CPT1AP50416 RIBC1-202ENST00000375327 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CPT1AP50416 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CPT1AP50416 CDH16-204ENST00000565796 2694 ntTSL 2 BASIC15.08■□□□□ 0
CPT1AP50416 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC15.08■□□□□ 0
CPT1AP50416 TRIB2-201ENST00000155926 4391 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CPT1AP50416 APEX1-201ENST00000216714 1484 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CPT1AP50416 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC15.07■□□□□ 0
CPT1AP50416 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
CPT1AP50416 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
CPT1AP50416 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
CPT1AP50416 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC15.07■□□□□ 0
CPT1AP50416 ZFYVE19-215ENST00000570108 1669 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
CPT1AP50416 ZBP1-201ENST00000371173 2195 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
CPT1AP50416 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
CPT1AP50416 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
CPT1AP50416 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
CPT1AP50416 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC15.07■□□□□ 0
CPT1AP50416 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CPT1AP50416 PPM1M-203ENST00000409502 1790 ntTSL 1 (best) BASIC15.07■□□□□ 0
CPT1AP50416 PMM1-201ENST00000216259 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CPT1AP50416 EDDM3B-201ENST00000326783 896 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CPT1AP50416 NQO2-204ENST00000380454 851 ntTSL 2 BASIC15.07■□□□□ 0
CPT1AP50416 MRPL55-219ENST00000391867 685 ntAPPRIS P1 TSL 3 BASIC15.07■□□□□ 0
CPT1AP50416 KLHL7-204ENST00000410047 1233 ntTSL 5 BASIC15.07■□□□□ 0
CPT1AP50416 GRP-202ENST00000420468 579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
CPT1AP50416 HNF1A-AS1-201ENST00000433033 612 ntTSL 3 BASIC15.07■□□□□ 0
CPT1AP50416 AP001092.1-201ENST00000433606 469 ntTSL 3 BASIC15.07■□□□□ 0
CPT1AP50416 AC108879.1-201ENST00000438026 828 ntTSL 3 BASIC15.07■□□□□ 0
CPT1AP50416 RPL35P1-201ENST00000450819 370 ntBASIC15.07■□□□□ 0
CPT1AP50416 PSME2P2-201ENST00000453033 700 ntBASIC15.07■□□□□ 0
CPT1AP50416 TREX1-203ENST00000456089 629 ntTSL 3 BASIC15.07■□□□□ 0
CPT1AP50416 AC244097.1-201ENST00000621631 1216 ntBASIC15.07■□□□□ 0
CPT1AP50416 IQSEC2-207ENST00000638583 722 ntTSL 5 BASIC15.07■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms