Protein–RNA interactions for Protein: P46100

ATRX, Transcriptional regulator ATRX, humanhuman

Predictions only

Length 2,492 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATRXP46100 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
ATRXP46100 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
ATRXP46100 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
ATRXP46100 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
ATRXP46100 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
ATRXP46100 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
ATRXP46100 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC12.44□□□□□ -0.42
ATRXP46100 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
ATRXP46100 KRTAP10-4-201ENST00000400374 1643 ntAPPRIS P2 BASIC12.44□□□□□ -0.42
ATRXP46100 CSF2RB-202ENST00000403662 4863 ntAPPRIS P2 TSL 5 BASIC12.44□□□□□ -0.42
ATRXP46100 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC12.44□□□□□ -0.42
ATRXP46100 PLEC-210ENST00000527096 13713 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
ATRXP46100 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
ATRXP46100 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
ATRXP46100 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC12.44□□□□□ -0.42
ATRXP46100 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
ATRXP46100 FCER1A-201ENST00000368114 765 ntTSL 3 BASIC12.44□□□□□ -0.42
ATRXP46100 RBMXP1-201ENST00000408004 1191 ntBASIC12.44□□□□□ -0.42
ATRXP46100 TSEN15P3-201ENST00000422363 367 ntBASIC12.44□□□□□ -0.42
ATRXP46100 AL121972.2-201ENST00000431108 556 ntTSL 4 BASIC12.44□□□□□ -0.42
ATRXP46100 ALKBH2-203ENST00000440112 574 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
ATRXP46100 AL662791.4-201ENST00000445544 317 ntTSL 3 BASIC12.44□□□□□ -0.42
ATRXP46100 LRP4-AS1-202ENST00000531719 731 ntTSL 4 BASIC12.44□□□□□ -0.42
ATRXP46100 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC12.44□□□□□ -0.42
ATRXP46100 TRO-225ENST00000622017 1403 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
ATRXP46100 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
ATRXP46100 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
ATRXP46100 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC12.43□□□□□ -0.42
ATRXP46100 MUC1-223ENST00000611571 4170 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
ATRXP46100 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
ATRXP46100 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
ATRXP46100 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
ATRXP46100 TRAF3-208ENST00000560371 7640 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
ATRXP46100 HEXA-206ENST00000566304 1795 ntTSL 2 BASIC12.43□□□□□ -0.42
ATRXP46100 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
ATRXP46100 CPPED1-201ENST00000261660 1898 ntTSL 2 BASIC12.43□□□□□ -0.42
ATRXP46100 GIPC3-201ENST00000322315 4335 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
ATRXP46100 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
ATRXP46100 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC12.43□□□□□ -0.42
ATRXP46100 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC12.43□□□□□ -0.42
ATRXP46100 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC12.43□□□□□ -0.42
ATRXP46100 KLK8-203ENST00000347619 555 ntTSL 2 BASIC12.43□□□□□ -0.42
ATRXP46100 AC096677.3-201ENST00000413162 387 ntBASIC12.43□□□□□ -0.42
ATRXP46100 SDCBP2P1-201ENST00000416115 614 ntBASIC12.43□□□□□ -0.42
ATRXP46100 AL583824.1-203ENST00000457948 761 ntTSL 2 BASIC12.43□□□□□ -0.42
ATRXP46100 RN7SL646P-201ENST00000492969 297 ntBASIC12.43□□□□□ -0.42
ATRXP46100 AC114812.4-201ENST00000506676 757 ntBASIC12.43□□□□□ -0.42
ATRXP46100 UBE2D3-221ENST00000507845 577 ntTSL 4 BASIC12.43□□□□□ -0.42
ATRXP46100 AC099524.1-203ENST00000565272 756 ntTSL 5 BASIC12.43□□□□□ -0.42
ATRXP46100 MIR378I-201ENST00000582688 76 ntBASIC12.43□□□□□ -0.42
ATRXP46100 TRMT112P6-201ENST00000599234 372 ntBASIC12.43□□□□□ -0.42
ATRXP46100 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
ATRXP46100 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC12.43□□□□□ -0.42
ATRXP46100 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
ATRXP46100 TUBB8-206ENST00000568584 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
ATRXP46100 PLEC-204ENST00000354958 14751 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
ATRXP46100 PLEC-208ENST00000436759 14787 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
ATRXP46100 ARRDC5-201ENST00000381781 1638 ntAPPRIS P1 TSL 3 BASIC12.43□□□□□ -0.42
ATRXP46100 ELP4-228ENST00000640954 1612 ntTSL 5 BASIC12.43□□□□□ -0.42
ATRXP46100 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
ATRXP46100 PAX5-204ENST00000377852 1472 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
ATRXP46100 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
ATRXP46100 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
ATRXP46100 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
ATRXP46100 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
ATRXP46100 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC12.43□□□□□ -0.42
ATRXP46100 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
ATRXP46100 DLX4-206ENST00000611342 1662 ntBASIC12.43□□□□□ -0.42
ATRXP46100 AC073869.1-201ENST00000415574 2762 ntBASIC12.43□□□□□ -0.42
ATRXP46100 TRAPPC4-214ENST00000533632 1759 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
ATRXP46100 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
ATRXP46100 PSORS1C2-201ENST00000259845 1150 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
ATRXP46100 BCL2L11-202ENST00000337565 720 ntTSL 5 BASIC12.43□□□□□ -0.42
ATRXP46100 AC007383.2-201ENST00000420509 752 ntTSL 2 BASIC12.43□□□□□ -0.42
ATRXP46100 PFN1P10-201ENST00000455962 327 ntBASIC12.43□□□□□ -0.42
ATRXP46100 AC079250.1-201ENST00000456046 531 ntBASIC12.43□□□□□ -0.42
ATRXP46100 AC068620.1-201ENST00000470544 798 ntBASIC12.43□□□□□ -0.42
ATRXP46100 RPL29P2-202ENST00000498671 657 ntBASIC12.43□□□□□ -0.42
ATRXP46100 AP001102.1-201ENST00000528959 409 ntBASIC12.43□□□□□ -0.42
ATRXP46100 LINC00929-202ENST00000556159 1169 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
ATRXP46100 AC013472.3-201ENST00000607407 659 ntBASIC12.43□□□□□ -0.42
ATRXP46100 AC009779.7-201ENST00000609031 469 ntBASIC12.43□□□□□ -0.42
ATRXP46100 TTC28-AS1_1.1-201ENST00000614690 162 ntBASIC12.43□□□□□ -0.42
ATRXP46100 Metazoa_SRP.153-201ENST00000620153 341 ntBASIC12.43□□□□□ -0.42
ATRXP46100 AC245369.3-201ENST00000624687 411 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
ATRXP46100 TRPC5OS-203ENST00000635763 955 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
ATRXP46100 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC12.43□□□□□ -0.42
ATRXP46100 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC12.42□□□□□ -0.42
ATRXP46100 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
ATRXP46100 NORAD-201ENST00000565493 5339 ntBASIC12.42□□□□□ -0.42
ATRXP46100 DDX31-202ENST00000372153 3285 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
ATRXP46100 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
ATRXP46100 GSN-215ENST00000545652 2428 ntTSL 2 BASIC12.42□□□□□ -0.42
ATRXP46100 TP53INP2-202ENST00000374810 4184 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
ATRXP46100 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
ATRXP46100 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC12.42□□□□□ -0.42
ATRXP46100 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
ATRXP46100 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
ATRXP46100 ALDOA-202ENST00000395240 1447 ntAPPRIS ALT1 TSL 5 BASIC12.42□□□□□ -0.42
ATRXP46100 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 67.2 ms