Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 CCNY-203ENST00000374704 3960 ntAPPRIS P4 TSL 1 (best) BASIC14.83□□□□□ -0.04
SSR1P43307 ATXN2L-205ENST00000395547 3981 ntAPPRIS P4 TSL 1 (best) BASIC14.83□□□□□ -0.04
SSR1P43307 NPAS4-201ENST00000311034 3303 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SSR1P43307 LDB3-205ENST00000429277 5436 ntTSL 2 BASIC14.83□□□□□ -0.04
SSR1P43307 CCNH-201ENST00000256897 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SSR1P43307 SPATA13-203ENST00000382108 8463 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
SSR1P43307 AC006450.3-201ENST00000453529 2146 ntTSL 2 BASIC14.83□□□□□ -0.04
SSR1P43307 OPRK1-201ENST00000265572 5014 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SSR1P43307 SDC1-202ENST00000381150 3291 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
SSR1P43307 AL356258.1-201ENST00000605929 2246 ntTSL 2 BASIC14.82□□□□□ -0.04
SSR1P43307 DNAJC3-202ENST00000602402 5591 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SSR1P43307 LINC01662-201ENST00000342888 1859 ntTSL 2 BASIC14.82□□□□□ -0.04
SSR1P43307 CARS-214ENST00000529772 2637 ntTSL 2 BASIC14.82□□□□□ -0.04
SSR1P43307 HYOU1-220ENST00000617285 4529 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SSR1P43307 NDRG4-221ENST00000563799 3014 ntAPPRIS ALT1 TSL 2 BASIC14.82□□□□□ -0.04
SSR1P43307 LARP7-202ENST00000344442 2286 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
SSR1P43307 AC003986.1-201ENST00000452700 1526 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
SSR1P43307 AC138761.4-201ENST00000578881 1514 ntTSL 3 BASIC14.82□□□□□ -0.04
SSR1P43307 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC14.82□□□□□ -0.04
SSR1P43307 TP53TG5-201ENST00000372726 2374 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SSR1P43307 BHLHE40-AS1-204ENST00000620618 2355 ntTSL 2 BASIC14.82□□□□□ -0.04
SSR1P43307 SLC4A2-204ENST00000461735 4387 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
SSR1P43307 FAM225A-202ENST00000453010 5625 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
SSR1P43307 TADA3-204ENST00000440161 1617 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
SSR1P43307 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
SSR1P43307 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
SSR1P43307 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC14.82□□□□□ -0.04
SSR1P43307 FAM122C-203ENST00000414371 2119 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
SSR1P43307 SF3B1-204ENST00000414963 651 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
SSR1P43307 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC14.82□□□□□ -0.04
SSR1P43307 Z82188.2-201ENST00000419128 630 ntTSL 5 BASIC14.82□□□□□ -0.04
SSR1P43307 TSPY25P-201ENST00000429463 745 ntBASIC14.82□□□□□ -0.04
SSR1P43307 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC14.82□□□□□ -0.04
SSR1P43307 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC14.82□□□□□ -0.04
SSR1P43307 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC14.82□□□□□ -0.04
SSR1P43307 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC14.82□□□□□ -0.04
SSR1P43307 WDYHV1-206ENST00000523356 869 ntTSL 3 BASIC14.82□□□□□ -0.04
SSR1P43307 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC14.82□□□□□ -0.04
SSR1P43307 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC14.82□□□□□ -0.04
SSR1P43307 TSHR-205ENST00000554263 1184 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
SSR1P43307 TSHR-206ENST00000554435 1089 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
SSR1P43307 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC14.82□□□□□ -0.04
SSR1P43307 JPT2-214ENST00000569765 782 ntTSL 2 BASIC14.82□□□□□ -0.04
SSR1P43307 SNORD3B-2-202ENST00000571722 791 ntBASIC14.82□□□□□ -0.04
SSR1P43307 AC004623.1-201ENST00000624592 2127 ntBASIC14.82□□□□□ -0.04
SSR1P43307 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC14.82□□□□□ -0.04
SSR1P43307 SIGLEC6-201ENST00000343300 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
SSR1P43307 NADK-202ENST00000341991 3098 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
SSR1P43307 PAX8-203ENST00000348715 3966 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
SSR1P43307 KCND1-201ENST00000218176 4437 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SSR1P43307 EPB42-210ENST00000622454 2227 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
SSR1P43307 FSTL4-207ENST00000621681 2660 ntTSL 5 BASIC14.82□□□□□ -0.04
SSR1P43307 APOB-202ENST00000399256 3128 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
SSR1P43307 CDHR5-202ENST00000358353 3635 ntAPPRIS P4 TSL 5 BASIC14.82□□□□□ -0.04
SSR1P43307 AL445250.1-201ENST00000641671 2259 ntBASIC14.82□□□□□ -0.04
SSR1P43307 MYRF-202ENST00000278836 5927 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
SSR1P43307 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
SSR1P43307 AC092171.2-201ENST00000444210 3251 ntTSL 5 BASIC14.82□□□□□ -0.04
SSR1P43307 HSPA6-201ENST00000309758 2371 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
SSR1P43307 LINC01815-202ENST00000641468 1409 ntBASIC14.82□□□□□ -0.04
SSR1P43307 SPHK2-206ENST00000598088 2866 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
SSR1P43307 TMEM121B-202ENST00000399875 3961 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
SSR1P43307 TRAIP-201ENST00000331456 2028 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SSR1P43307 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SSR1P43307 TSPEAR-AS1-202ENST00000451035 2108 ntTSL 5 BASIC14.81□□□□□ -0.04
SSR1P43307 TSC22D3-204ENST00000372384 2199 ntTSL 2 BASIC14.81□□□□□ -0.04
SSR1P43307 MOG-221ENST00000376917 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
SSR1P43307 PRR26-202ENST00000441152 2251 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
SSR1P43307 USF1-202ENST00000368020 1717 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SSR1P43307 SF1-205ENST00000377394 2854 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SSR1P43307 KRT36-202ENST00000393986 1707 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SSR1P43307 SLC1A1-201ENST00000262352 3722 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SSR1P43307 MIER2-201ENST00000264819 6884 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SSR1P43307 BIVM-ERCC5-205ENST00000639435 5632 ntAPPRIS P5 TSL 5 BASIC14.81□□□□□ -0.04
SSR1P43307 MRPL32-201ENST00000223324 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SSR1P43307 EIF3F-201ENST00000309828 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SSR1P43307 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SSR1P43307 SPRY4-AS1-203ENST00000443800 566 ntTSL 3 BASIC14.81□□□□□ -0.04
SSR1P43307 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC14.81□□□□□ -0.04
SSR1P43307 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC14.81□□□□□ -0.04
SSR1P43307 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC14.81□□□□□ -0.04
SSR1P43307 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC14.81□□□□□ -0.04
SSR1P43307 NAT9-222ENST00000583476 583 ntTSL 3 BASIC14.81□□□□□ -0.04
SSR1P43307 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC14.81□□□□□ -0.04
SSR1P43307 AL157813.1-201ENST00000612996 587 ntBASIC14.81□□□□□ -0.04
SSR1P43307 AC244197.3-201ENST00000422081 2635 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
SSR1P43307 NR4A2-209ENST00000426264 2642 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SSR1P43307 FLJ40288-201ENST00000332558 1998 ntTSL 2 BASIC14.81□□□□□ -0.04
SSR1P43307 SHMT1P1-201ENST00000419974 1312 ntBASIC14.81□□□□□ -0.04
SSR1P43307 HINT3-201ENST00000229633 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SSR1P43307 FRMD6-203ENST00000395718 4828 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SSR1P43307 FLNA-203ENST00000369850 8382 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
SSR1P43307 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC14.81□□□□□ -0.04
SSR1P43307 FAM219A-207ENST00000379089 3624 ntAPPRIS ALT1 TSL 3 BASIC14.81□□□□□ -0.04
SSR1P43307 MSMO1-201ENST00000261507 2269 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SSR1P43307 ASS1-203ENST00000372393 1548 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
SSR1P43307 GPR35-205ENST00000438013 3821 ntAPPRIS P3 BASIC14.81□□□□□ -0.04
SSR1P43307 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SSR1P43307 GPD1-205ENST00000548814 1591 ntTSL 2 BASIC14.81□□□□□ -0.04
SSR1P43307 SLC5A11-202ENST00000424767 2399 ntTSL 2 BASIC14.81□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms