Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 PHBP15-201ENST00000574228 665 ntBASIC14.45□□□□□ -0.1
SLC1A1P43005 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC14.45□□□□□ -0.1
SLC1A1P43005 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC14.45□□□□□ -0.1
SLC1A1P43005 AL049840.2-201ENST00000602722 535 ntBASIC14.45□□□□□ -0.1
SLC1A1P43005 AL121956.4-201ENST00000629925 581 ntTSL 5 BASIC14.45□□□□□ -0.1
SLC1A1P43005 PRKAB1-210ENST00000630317 258 ntTSL 2 BASIC14.45□□□□□ -0.1
SLC1A1P43005 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC14.45□□□□□ -0.1
SLC1A1P43005 LAMB1-201ENST00000222399 5725 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SLC1A1P43005 TNIP3-201ENST00000057513 2416 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
SLC1A1P43005 CIPC-201ENST00000361786 4486 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SLC1A1P43005 DISC1-221ENST00000620189 6689 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
SLC1A1P43005 LATS1-207ENST00000543571 7517 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SLC1A1P43005 BISPR-204ENST00000634675 1806 ntTSL 2 BASIC14.45□□□□□ -0.1
SLC1A1P43005 PBXIP1-203ENST00000368465 3144 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
SLC1A1P43005 OARD1-203ENST00000463088 1515 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
SLC1A1P43005 SLC4A11-207ENST00000539553 2832 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
SLC1A1P43005 TOB1-AS1-201ENST00000416263 1351 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
SLC1A1P43005 FAM168B-202ENST00000409185 5285 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SLC1A1P43005 C21orf59-203ENST00000382549 2503 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
SLC1A1P43005 SGSM1-206ENST00000610372 5991 ntTSL 5 BASIC14.45□□□□□ -0.1
SLC1A1P43005 RUFY4-201ENST00000344321 2352 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
SLC1A1P43005 ALG6-202ENST00000371108 3371 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
SLC1A1P43005 ZNF501-205ENST00000620116 3382 ntAPPRIS P1 TSL 4 BASIC14.45□□□□□ -0.1
SLC1A1P43005 KLHL8-201ENST00000273963 5621 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SLC1A1P43005 MCF2L-204ENST00000375608 3648 ntTSL 5 BASIC14.45□□□□□ -0.1
SLC1A1P43005 IL10-202ENST00000423557 1630 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SLC1A1P43005 RIN3-201ENST00000216487 3859 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
SLC1A1P43005 LRRC17-201ENST00000249377 2002 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SLC1A1P43005 TRIT1-202ENST00000372818 2034 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SLC1A1P43005 EDN1-201ENST00000379375 2033 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SLC1A1P43005 AC011287.1-201ENST00000639998 1349 ntTSL 5 BASIC14.44□□□□□ -0.1
SLC1A1P43005 ZNF384-201ENST00000319770 3266 ntTSL 2 BASIC14.44□□□□□ -0.1
SLC1A1P43005 AC127496.1-201ENST00000576234 3133 ntTSL 2 BASIC14.44□□□□□ -0.1
SLC1A1P43005 GPATCH2L-202ENST00000312858 2438 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
SLC1A1P43005 POLL-202ENST00000339310 2289 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SLC1A1P43005 ZNF774-201ENST00000354377 3202 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SLC1A1P43005 CRTC1-202ENST00000338797 6929 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SLC1A1P43005 CCDC142-202ENST00000393965 3406 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
SLC1A1P43005 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SLC1A1P43005 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SLC1A1P43005 DEFB123-201ENST00000376309 467 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SLC1A1P43005 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
SLC1A1P43005 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SLC1A1P43005 ISCA2P1-201ENST00000425548 448 ntBASIC14.44□□□□□ -0.1
SLC1A1P43005 EEF1DP2-201ENST00000433698 843 ntBASIC14.44□□□□□ -0.1
SLC1A1P43005 AC006033.1-201ENST00000440505 426 ntBASIC14.44□□□□□ -0.1
SLC1A1P43005 TIMP1-205ENST00000456754 1095 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SLC1A1P43005 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SLC1A1P43005 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC14.44□□□□□ -0.1
SLC1A1P43005 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC14.44□□□□□ -0.1
SLC1A1P43005 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SLC1A1P43005 AC133919.1-201ENST00000562203 416 ntTSL 3 BASIC14.44□□□□□ -0.1
SLC1A1P43005 AC145285.5-201ENST00000562217 361 ntBASIC14.44□□□□□ -0.1
SLC1A1P43005 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC14.44□□□□□ -0.1
SLC1A1P43005 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC14.44□□□□□ -0.1
SLC1A1P43005 AC104961.2-201ENST00000578129 663 ntTSL 2 BASIC14.44□□□□□ -0.1
SLC1A1P43005 KC6-205ENST00000599934 556 ntTSL 4 BASIC14.44□□□□□ -0.1
SLC1A1P43005 LYRM9-202ENST00000379103 1685 ntAPPRIS P1 TSL 3 BASIC14.44□□□□□ -0.1
SLC1A1P43005 ASB2-201ENST00000315988 2743 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SLC1A1P43005 UBE2W-201ENST00000419880 2315 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SLC1A1P43005 CSF3-201ENST00000225474 1509 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
SLC1A1P43005 METTL17-221ENST00000556670 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
SLC1A1P43005 ADCY4-202ENST00000418030 3353 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SLC1A1P43005 SLIT3-206ENST00000519560 9706 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
SLC1A1P43005 BRSK1-206ENST00000590333 2977 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SLC1A1P43005 PPT1-204ENST00000439754 2195 ntTSL 3 BASIC14.44□□□□□ -0.1
SLC1A1P43005 GPN1-211ENST00000610189 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
SLC1A1P43005 PAX6-264ENST00000640125 1375 ntTSL 5 BASIC14.44□□□□□ -0.1
SLC1A1P43005 LAIR1-209ENST00000434277 1645 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
SLC1A1P43005 SLC6A5-202ENST00000525748 7084 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SLC1A1P43005 DIO1-216ENST00000613679 1856 ntAPPRIS ALT1 TSL 5 BASIC14.44□□□□□ -0.1
SLC1A1P43005 MATN1-AS1-201ENST00000414532 3925 ntTSL 2 BASIC14.44□□□□□ -0.1
SLC1A1P43005 APBB3-205ENST00000412920 1455 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SLC1A1P43005 CELF4-217ENST00000591282 1461 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
SLC1A1P43005 BRSK2-207ENST00000528710 3528 ntTSL 2 BASIC14.44□□□□□ -0.1
SLC1A1P43005 HAL-202ENST00000538703 2637 ntTSL 2 BASIC14.44□□□□□ -0.1
SLC1A1P43005 OSBPL9-201ENST00000361556 2721 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
SLC1A1P43005 ABCA2-203ENST00000371605 8151 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
SLC1A1P43005 KRT18P9-201ENST00000604826 1300 ntBASIC14.43□□□□□ -0.1
SLC1A1P43005 TLE3-211ENST00000557997 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SLC1A1P43005 PIAS1-202ENST00000545237 2932 ntTSL 2 BASIC14.43□□□□□ -0.1
SLC1A1P43005 AC022364.1-202ENST00000617468 2409 ntBASIC14.43□□□□□ -0.1
SLC1A1P43005 HSPA8P9-201ENST00000485881 1943 ntBASIC14.43□□□□□ -0.1
SLC1A1P43005 SDC1-202ENST00000381150 3291 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
SLC1A1P43005 FFAR4-201ENST00000371481 3605 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SLC1A1P43005 GRIN1-207ENST00000371560 3640 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SLC1A1P43005 RIN3-212ENST00000620541 3617 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
SLC1A1P43005 ZDHHC11-201ENST00000283441 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SLC1A1P43005 GFI1B-203ENST00000372123 1514 ntTSL 5 BASIC14.43□□□□□ -0.1
SLC1A1P43005 NR1H3-201ENST00000395397 1501 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
SLC1A1P43005 SPAAR-203ENST00000636776 1538 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
SLC1A1P43005 LINC00940-201ENST00000418006 2350 ntTSL 2 BASIC14.43□□□□□ -0.1
SLC1A1P43005 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SLC1A1P43005 MPRIP-202ENST00000341712 3846 ntAPPRIS P3 TSL 5 BASIC14.43□□□□□ -0.1
SLC1A1P43005 SLC35B3-201ENST00000379660 2137 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SLC1A1P43005 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
SLC1A1P43005 GGTLC4P-201ENST00000402176 664 ntBASIC14.43□□□□□ -0.1
SLC1A1P43005 TEX33-202ENST00000402860 986 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
SLC1A1P43005 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC14.43□□□□□ -0.1
SLC1A1P43005 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC14.43□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms