Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 AC097065.1-201ENST00000425737 517 ntBASIC12.72□□□□□ -0.37
RFC3P40938 LINC00028-201ENST00000435497 587 ntTSL 2 BASIC12.72□□□□□ -0.37
RFC3P40938 IZUMO1R-202ENST00000440961 805 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
RFC3P40938 AC253536.3-201ENST00000444093 558 ntTSL 3 BASIC12.72□□□□□ -0.37
RFC3P40938 STK24P1-201ENST00000455035 1291 ntBASIC12.72□□□□□ -0.37
RFC3P40938 TRBC2-201ENST00000466254 758 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
RFC3P40938 AL713999.1-201ENST00000473363 753 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
RFC3P40938 PPIA-208ENST00000489459 907 ntTSL 2 BASIC12.72□□□□□ -0.37
RFC3P40938 RN7SL767P-201ENST00000493013 295 ntBASIC12.72□□□□□ -0.37
RFC3P40938 EIF2B1-205ENST00000539951 848 ntTSL 5 BASIC12.72□□□□□ -0.37
RFC3P40938 AL132994.1-201ENST00000554098 400 ntBASIC12.72□□□□□ -0.37
RFC3P40938 AC092139.2-201ENST00000563750 754 ntTSL 3 BASIC12.72□□□□□ -0.37
RFC3P40938 AC023421.2-201ENST00000589510 313 ntTSL 5 BASIC12.72□□□□□ -0.37
RFC3P40938 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC12.72□□□□□ -0.37
RFC3P40938 TMIGD2-204ENST00000600349 333 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
RFC3P40938 PPIA-210ENST00000620047 827 ntTSL 5 BASIC12.72□□□□□ -0.37
RFC3P40938 HELLS-212ENST00000630929 400 ntTSL 5 BASIC12.72□□□□□ -0.37
RFC3P40938 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC12.72□□□□□ -0.37
RFC3P40938 USP39-207ENST00000450066 2086 ntTSL 2 BASIC12.72□□□□□ -0.37
RFC3P40938 TONSL-201ENST00000409379 4502 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
RFC3P40938 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
RFC3P40938 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
RFC3P40938 PPARG-205ENST00000397010 2017 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
RFC3P40938 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
RFC3P40938 C9orf152-201ENST00000400613 2717 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
RFC3P40938 ZNF75A-205ENST00000574298 2347 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
RFC3P40938 IKZF1-204ENST00000349824 5757 ntTSL 5 BASIC12.72□□□□□ -0.37
RFC3P40938 ZBTB2-201ENST00000325144 3090 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
RFC3P40938 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
RFC3P40938 CNBP-205ENST00000500450 1516 ntTSL 2 BASIC12.72□□□□□ -0.37
RFC3P40938 AC021305.1-201ENST00000520656 1514 ntBASIC12.72□□□□□ -0.37
RFC3P40938 AC004554.1-201ENST00000422830 1468 ntBASIC12.72□□□□□ -0.37
RFC3P40938 AC025183.3-201ENST00000623526 1482 ntBASIC12.72□□□□□ -0.37
RFC3P40938 MEGF8-201ENST00000251268 9549 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
RFC3P40938 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC12.72□□□□□ -0.37
RFC3P40938 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC12.72□□□□□ -0.37
RFC3P40938 ZNF800-203ENST00000393313 4358 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
RFC3P40938 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
RFC3P40938 GALNT7-201ENST00000265000 4307 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
RFC3P40938 CSPG4-201ENST00000308508 8290 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
RFC3P40938 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
RFC3P40938 PAM-201ENST00000304400 3156 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
RFC3P40938 NLRP2B-201ENST00000434992 3194 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
RFC3P40938 SYT12-201ENST00000393946 4534 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
RFC3P40938 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
RFC3P40938 DRD2-201ENST00000346454 2433 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
RFC3P40938 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
RFC3P40938 CDC45-205ENST00000437685 2072 ntTSL 2 BASIC12.71□□□□□ -0.37
RFC3P40938 CAMK2B-217ENST00000457475 4142 ntTSL 5 BASIC12.71□□□□□ -0.37
RFC3P40938 SLC25A3-216ENST00000551917 1359 ntAPPRIS P4 TSL 2 BASIC12.71□□□□□ -0.37
RFC3P40938 RPL18A-205ENST00000600147 1391 ntTSL 5 BASIC12.71□□□□□ -0.37
RFC3P40938 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC12.71□□□□□ -0.37
RFC3P40938 WASHC2A-209ENST00000611324 4417 ntAPPRIS ALT2 TSL 2 BASIC12.71□□□□□ -0.37
RFC3P40938 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
RFC3P40938 FOXM1-203ENST00000361953 3370 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.37
RFC3P40938 AC152010.1-201ENST00000415779 2006 ntBASIC12.71□□□□□ -0.37
RFC3P40938 RP1L1-202ENST00000382483 7973 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
RFC3P40938 DACT3-AS1-201ENST00000500689 1304 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
RFC3P40938 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
RFC3P40938 LSS-201ENST00000356396 2995 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
RFC3P40938 PON3-201ENST00000265627 1105 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
RFC3P40938 CCL19-201ENST00000311925 687 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
RFC3P40938 BAK1P1-201ENST00000317045 636 ntBASIC12.71□□□□□ -0.37
RFC3P40938 HFE-203ENST00000336625 804 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
RFC3P40938 PLAC9-203ENST00000372270 534 ntAPPRIS ALT2 TSL 2 BASIC12.71□□□□□ -0.37
RFC3P40938 NUPL2-202ENST00000410002 680 ntTSL 2 BASIC12.71□□□□□ -0.37
RFC3P40938 HORMAD2-AS1-202ENST00000432568 727 ntTSL 3 BASIC12.71□□□□□ -0.37
RFC3P40938 SLC5A4-AS1-201ENST00000434942 876 ntTSL 3 BASIC12.71□□□□□ -0.37
RFC3P40938 GS1-124K5.4-201ENST00000445681 540 ntTSL 2 BASIC12.71□□□□□ -0.37
RFC3P40938 EEF1GP8-201ENST00000506566 1154 ntBASIC12.71□□□□□ -0.37
RFC3P40938 AC026410.1-201ENST00000507366 1101 ntBASIC12.71□□□□□ -0.37
RFC3P40938 IGHV1-12-201ENST00000518307 205 ntBASIC12.71□□□□□ -0.37
RFC3P40938 NPTN-204ENST00000562924 1094 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
RFC3P40938 AC023825.2-201ENST00000562970 672 ntTSL 2 BASIC12.71□□□□□ -0.37
RFC3P40938 AC132825.4-202ENST00000578792 434 ntBASIC12.71□□□□□ -0.37
RFC3P40938 PRELP-201ENST00000343110 5747 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
RFC3P40938 UQCC1-204ENST00000374384 2201 ntTSL 2 BASIC12.71□□□□□ -0.37
RFC3P40938 SLC46A3-201ENST00000266943 3173 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
RFC3P40938 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC12.71□□□□□ -0.37
RFC3P40938 AL928654.5-201ENST00000624831 2501 ntBASIC12.71□□□□□ -0.37
RFC3P40938 AC004997.1-205ENST00000447976 1851 ntTSL 2 BASIC12.71□□□□□ -0.37
RFC3P40938 CYB5D1-203ENST00000571846 1870 ntTSL 5 BASIC12.71□□□□□ -0.37
RFC3P40938 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC12.71□□□□□ -0.37
RFC3P40938 IFITM10-201ENST00000340134 3706 ntAPPRIS P1 TSL 3 BASIC12.71□□□□□ -0.37
RFC3P40938 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
RFC3P40938 TOLLIP-202ENST00000317204 3617 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
RFC3P40938 HMGA2-204ENST00000403681 4473 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
RFC3P40938 AL359643.2-201ENST00000606227 3273 ntTSL 2 BASIC12.71□□□□□ -0.38
RFC3P40938 ZSCAN2-202ENST00000327179 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.38
RFC3P40938 GOLGA8UP-201ENST00000527159 1755 ntBASIC12.71□□□□□ -0.38
RFC3P40938 IQCJ-201ENST00000397832 1460 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
RFC3P40938 OAS3-201ENST00000228928 6719 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
RFC3P40938 ADCY3-202ENST00000405392 4397 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.38
RFC3P40938 OS9-206ENST00000435406 2346 ntTSL 2 BASIC12.71□□□□□ -0.38
RFC3P40938 MAGI2-218ENST00000630991 2349 ntTSL 2 BASIC12.71□□□□□ -0.38
RFC3P40938 VGLL3-202ENST00000398399 10400 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
RFC3P40938 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
RFC3P40938 MAPRE2-201ENST00000300249 4265 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
RFC3P40938 MRPL55-205ENST00000366731 1423 ntTSL 2 BASIC12.71□□□□□ -0.38
RFC3P40938 BARX1-AS1-201ENST00000453045 1445 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 82.7 ms