Protein–RNA interactions for Protein: P37268

FDFT1, Squalene synthase, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FDFT1P37268 TLE3-211ENST00000557997 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
FDFT1P37268 CMTM3-215ENST00000568477 687 ntTSL 3 BASIC14.11□□□□□ -0.15
FDFT1P37268 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC14.11□□□□□ -0.15
FDFT1P37268 PHF2-203ENST00000610682 2921 ntTSL 5 BASIC14.11□□□□□ -0.15
FDFT1P37268 GARS-210ENST00000627489 324 ntTSL 4 BASIC14.11□□□□□ -0.15
FDFT1P37268 SAMD4A-213ENST00000631086 6677 ntTSL 5 BASIC14.11□□□□□ -0.15
FDFT1P37268 C1orf232-202ENST00000635463 466 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
FDFT1P37268 DDX3X-201ENST00000399959 5399 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
FDFT1P37268 GTF2IRD2B-203ENST00000472837 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
FDFT1P37268 PPP1R26P2-201ENST00000611403 3595 ntBASIC14.11□□□□□ -0.15
FDFT1P37268 KCTD9-201ENST00000221200 3401 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
FDFT1P37268 CD34-203ENST00000367036 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
FDFT1P37268 FAM156A-208ENST00000615092 2098 ntAPPRIS P2 TSL 5 BASIC14.11□□□□□ -0.15
FDFT1P37268 MBD1-225ENST00000591535 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
FDFT1P37268 C1QTNF1-203ENST00000354124 2714 ntAPPRIS P1 TSL 4 BASIC14.11□□□□□ -0.15
FDFT1P37268 SAP30BP-202ENST00000355423 2439 ntTSL 2 BASIC14.11□□□□□ -0.15
FDFT1P37268 RAB15-201ENST00000267512 3391 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
FDFT1P37268 SFI1-208ENST00000432498 4162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
FDFT1P37268 ICOSLG-202ENST00000400377 2907 ntTSL 2 BASIC14.11□□□□□ -0.15
FDFT1P37268 AL133338.1-201ENST00000565695 1517 ntBASIC14.1□□□□□ -0.15
FDFT1P37268 CTCFL-208ENST00000432255 2955 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
FDFT1P37268 PPP1R8-203ENST00000373931 2651 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
FDFT1P37268 USP49-201ENST00000373006 3177 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
FDFT1P37268 SIX4-201ENST00000216513 6285 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
FDFT1P37268 GOLGA8K-202ENST00000512626 1894 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
FDFT1P37268 KIR2DL3-201ENST00000342376 1590 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
FDFT1P37268 RBM25-204ENST00000526754 1567 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
FDFT1P37268 CX3CL1-204ENST00000565912 5796 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
FDFT1P37268 GRIN1-204ENST00000371553 3751 ntAPPRIS P4 TSL 1 (best) BASIC14.1□□□□□ -0.15
FDFT1P37268 PPP2R2C-204ENST00000506140 1780 ntTSL 2 BASIC14.1□□□□□ -0.15
FDFT1P37268 CRB3-201ENST00000308243 631 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
FDFT1P37268 CDK11B-203ENST00000341832 2998 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
FDFT1P37268 AC106827.1-201ENST00000366454 431 ntBASIC14.1□□□□□ -0.15
FDFT1P37268 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
FDFT1P37268 NFYC-202ENST00000372651 1202 ntAPPRIS P3 TSL 5 BASIC14.1□□□□□ -0.15
FDFT1P37268 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
FDFT1P37268 TEX33-202ENST00000402860 986 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
FDFT1P37268 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC14.1□□□□□ -0.15
FDFT1P37268 ISCA2P1-201ENST00000425548 448 ntBASIC14.1□□□□□ -0.15
FDFT1P37268 WBP2-203ENST00000433525 928 ntTSL 2 BASIC14.1□□□□□ -0.15
FDFT1P37268 AC098934.1-203ENST00000442868 1262 ntBASIC14.1□□□□□ -0.15
FDFT1P37268 GS1-124K5.4-201ENST00000445681 540 ntTSL 2 BASIC14.1□□□□□ -0.15
FDFT1P37268 RPSAP15-201ENST00000448168 861 ntBASIC14.1□□□□□ -0.15
FDFT1P37268 AC114947.1-202ENST00000514136 344 ntBASIC14.1□□□□□ -0.15
FDFT1P37268 AC087269.1-202ENST00000519147 400 ntTSL 3 BASIC14.1□□□□□ -0.15
FDFT1P37268 AP001258.2-201ENST00000529891 490 ntBASIC14.1□□□□□ -0.15
FDFT1P37268 MRPS10-201ENST00000053468 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
FDFT1P37268 NDUFC1-209ENST00000539002 1198 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
FDFT1P37268 NDUFC1-211ENST00000544855 1257 ntAPPRIS P1 TSL 3 BASIC14.1□□□□□ -0.15
FDFT1P37268 PHBP15-201ENST00000574228 665 ntBASIC14.1□□□□□ -0.15
FDFT1P37268 MIR4326-201ENST00000582203 59 ntBASIC14.1□□□□□ -0.15
FDFT1P37268 RN7SL219P-201ENST00000582872 296 ntBASIC14.1□□□□□ -0.15
FDFT1P37268 AC020914.3-201ENST00000594712 304 ntBASIC14.1□□□□□ -0.15
FDFT1P37268 EAF1-AS1-208ENST00000608408 770 ntTSL 5 BASIC14.1□□□□□ -0.15
FDFT1P37268 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC14.1□□□□□ -0.15
FDFT1P37268 CEP112-202ENST00000392769 3517 ntAPPRIS P4 TSL 5 BASIC14.1□□□□□ -0.15
FDFT1P37268 ATXN2L-215ENST00000564304 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
FDFT1P37268 NFKB1-201ENST00000226574 4085 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
FDFT1P37268 TMUB2-215ENST00000592825 2151 ntTSL 3 BASIC14.1□□□□□ -0.15
FDFT1P37268 AC239809.3-201ENST00000599640 4266 ntTSL 5 BASIC14.1□□□□□ -0.15
FDFT1P37268 MBP-205ENST00000397860 4844 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
FDFT1P37268 LINC00567-201ENST00000569854 3409 ntBASIC14.1□□□□□ -0.15
FDFT1P37268 GABPB1-201ENST00000220429 2726 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
FDFT1P37268 SNCAIP-222ENST00000542191 2729 ntTSL 5 BASIC14.1□□□□□ -0.15
FDFT1P37268 ALG8-202ENST00000376156 1677 ntTSL 2 BASIC14.1□□□□□ -0.15
FDFT1P37268 SERF1B-204ENST00000506542 1666 ntTSL 3 BASIC14.1□□□□□ -0.15
FDFT1P37268 APTX-211ENST00000463596 1345 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
FDFT1P37268 ANKZF1-201ENST00000323348 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
FDFT1P37268 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
FDFT1P37268 FGF10-AS1-201ENST00000502457 1894 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
FDFT1P37268 OARD1-203ENST00000463088 1515 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
FDFT1P37268 METTL17-221ENST00000556670 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
FDFT1P37268 DANT2-201ENST00000430756 2079 ntTSL 3 BASIC14.1□□□□□ -0.15
FDFT1P37268 RIC1-203ENST00000414202 6774 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
FDFT1P37268 GMIP-201ENST00000203556 3538 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
FDFT1P37268 ACAP2-201ENST00000326793 7160 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
FDFT1P37268 NRXN1-207ENST00000404971 7578 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
FDFT1P37268 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
FDFT1P37268 MAPK14-204ENST00000468133 1376 ntTSL 2 BASIC14.09□□□□□ -0.15
FDFT1P37268 RECQL5-218ENST00000584999 1922 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
FDFT1P37268 C7orf57-201ENST00000348904 2125 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
FDFT1P37268 MEAF6-204ENST00000373075 2147 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
FDFT1P37268 GSE1-203ENST00000405402 4366 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
FDFT1P37268 PCDHA2-202ENST00000520672 3056 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
FDFT1P37268 IRAK3-201ENST00000261233 8663 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
FDFT1P37268 HPSE2-206ENST00000628193 1760 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
FDFT1P37268 XRCC6-201ENST00000359308 2709 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
FDFT1P37268 ZCCHC18-206ENST00000611638 2941 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
FDFT1P37268 RUBCNL-201ENST00000378781 3322 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
FDFT1P37268 C3orf18-206ENST00000449241 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
FDFT1P37268 KRT8P31-201ENST00000504812 1408 ntBASIC14.09□□□□□ -0.15
FDFT1P37268 CNN1-201ENST00000252456 1633 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
FDFT1P37268 CACNA1A-211ENST00000592864 1623 ntTSL 3 BASIC14.09□□□□□ -0.15
FDFT1P37268 SEMA6D-208ENST00000558014 6028 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
FDFT1P37268 ADRA1A-210ENST00000519229 1838 ntTSL 5 BASIC14.09□□□□□ -0.15
FDFT1P37268 ZNF501-205ENST00000620116 3382 ntAPPRIS P1 TSL 4 BASIC14.09□□□□□ -0.15
FDFT1P37268 GDPD5-215ENST00000533805 2424 ntTSL 2 BASIC14.09□□□□□ -0.15
FDFT1P37268 SLC39A6-204ENST00000590986 3003 ntAPPRIS P3 TSL 5 BASIC14.09□□□□□ -0.15
FDFT1P37268 PLA2G4F-202ENST00000397272 5587 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
FDFT1P37268 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms