Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 AC009041.1-202ENST00000599946 987 ntTSL 5 BASIC16.76■□□□□ 0.27
PDE6BP35913 AL356740.1-201ENST00000602192 1297 ntBASIC16.76■□□□□ 0.27
PDE6BP35913 AC092535.4-201ENST00000609548 397 ntBASIC16.76■□□□□ 0.27
PDE6BP35913 PACRG-AS3-204ENST00000620150 567 ntTSL 4 BASIC16.76■□□□□ 0.27
PDE6BP35913 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC16.76■□□□□ 0.27
PDE6BP35913 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC16.76■□□□□ 0.27
PDE6BP35913 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
PDE6BP35913 COPS5-203ENST00000517736 1621 ntTSL 5 BASIC16.76■□□□□ 0.27
PDE6BP35913 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
PDE6BP35913 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PDE6BP35913 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
PDE6BP35913 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
PDE6BP35913 TUBD1-202ENST00000340993 1769 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
PDE6BP35913 TRAPPC4-214ENST00000533632 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PDE6BP35913 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PDE6BP35913 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC16.76■□□□□ 0.27
PDE6BP35913 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
PDE6BP35913 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC16.76■□□□□ 0.27
PDE6BP35913 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC16.76■□□□□ 0.27
PDE6BP35913 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC16.76■□□□□ 0.27
PDE6BP35913 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC16.76■□□□□ 0.27
PDE6BP35913 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PDE6BP35913 CHEK2-201ENST00000328354 1867 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
PDE6BP35913 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
PDE6BP35913 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC16.75■□□□□ 0.27
PDE6BP35913 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PDE6BP35913 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
PDE6BP35913 DLX4-206ENST00000611342 1662 ntBASIC16.75■□□□□ 0.27
PDE6BP35913 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PDE6BP35913 AL031587.5-201ENST00000624344 1849 ntBASIC16.75■□□□□ 0.27
PDE6BP35913 OXGR1-204ENST00000543457 1305 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PDE6BP35913 GRIA3-208ENST00000620581 2991 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
PDE6BP35913 AAR2-203ENST00000397286 1466 ntTSL 5 BASIC16.75■□□□□ 0.27
PDE6BP35913 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC16.75■□□□□ 0.27
PDE6BP35913 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PDE6BP35913 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PDE6BP35913 AC018904.2-201ENST00000561202 1757 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
PDE6BP35913 ERCC4-207ENST00000575156 2073 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
PDE6BP35913 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PDE6BP35913 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PDE6BP35913 PMF1-201ENST00000368273 884 ntTSL 2 BASIC16.75■□□□□ 0.27
PDE6BP35913 PIGL-202ENST00000395844 1257 ntTSL 5 BASIC16.75■□□□□ 0.27
PDE6BP35913 KIR2DL4-207ENST00000396293 715 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
PDE6BP35913 RBMXP1-201ENST00000408004 1191 ntBASIC16.75■□□□□ 0.27
PDE6BP35913 AK2P2-201ENST00000439142 405 ntBASIC16.75■□□□□ 0.27
PDE6BP35913 AC139493.2-202ENST00000510155 544 ntTSL 3 BASIC16.75■□□□□ 0.27
PDE6BP35913 CCNL2P1-201ENST00000512846 969 ntBASIC16.75■□□□□ 0.27
PDE6BP35913 AP001102.1-201ENST00000528959 409 ntBASIC16.75■□□□□ 0.27
PDE6BP35913 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PDE6BP35913 AC099524.1-203ENST00000565272 756 ntTSL 5 BASIC16.75■□□□□ 0.27
PDE6BP35913 CYB5D2-202ENST00000573984 495 ntTSL 4 BASIC16.75■□□□□ 0.27
PDE6BP35913 Metazoa_SRP.147-201ENST00000576563 312 ntBASIC16.75■□□□□ 0.27
PDE6BP35913 AC100786.1-201ENST00000583018 513 ntTSL 3 BASIC16.75■□□□□ 0.27
PDE6BP35913 AC112220.4-201ENST00000604982 1263 ntBASIC16.75■□□□□ 0.27
PDE6BP35913 AL450487.2-201ENST00000615934 407 ntBASIC16.75■□□□□ 0.27
PDE6BP35913 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
PDE6BP35913 CYP2B6-202ENST00000593831 1426 ntTSL 2 BASIC16.75■□□□□ 0.27
PDE6BP35913 AL031590.1-202ENST00000641466 1737 ntBASIC16.75■□□□□ 0.27
PDE6BP35913 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
PDE6BP35913 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC16.75■□□□□ 0.27
PDE6BP35913 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PDE6BP35913 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
PDE6BP35913 INCA1-201ENST00000355025 1383 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
PDE6BP35913 MRPS9-201ENST00000258455 1500 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PDE6BP35913 PINX1-201ENST00000314787 1545 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
PDE6BP35913 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
PDE6BP35913 SLC22A12-202ENST00000377567 2599 ntTSL 5 BASIC16.75■□□□□ 0.27
PDE6BP35913 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PDE6BP35913 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PDE6BP35913 TNRC18P2-201ENST00000417666 2714 ntBASIC16.75■□□□□ 0.27
PDE6BP35913 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PDE6BP35913 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
PDE6BP35913 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC16.74■□□□□ 0.27
PDE6BP35913 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PDE6BP35913 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
PDE6BP35913 AL591806.3-201ENST00000289779 2096 ntAPPRIS P5 TSL 2 BASIC16.74■□□□□ 0.27
PDE6BP35913 CETP-201ENST00000200676 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PDE6BP35913 HAO1-201ENST00000378789 1777 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PDE6BP35913 PGAP2-204ENST00000396991 1798 ntTSL 5 BASIC16.74■□□□□ 0.27
PDE6BP35913 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
PDE6BP35913 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC16.74■□□□□ 0.27
PDE6BP35913 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
PDE6BP35913 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC16.74■□□□□ 0.27
PDE6BP35913 SP140L-205ENST00000458341 1727 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
PDE6BP35913 TGM1-202ENST00000544573 1581 ntTSL 2 BASIC16.74■□□□□ 0.27
PDE6BP35913 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC16.74■□□□□ 0.27
PDE6BP35913 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PDE6BP35913 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PDE6BP35913 XRCC6-202ENST00000360079 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PDE6BP35913 OR6S1-201ENST00000320704 996 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
PDE6BP35913 POP5-201ENST00000341039 913 ntTSL 2 BASIC16.74■□□□□ 0.27
PDE6BP35913 CMTM5-204ENST00000382809 378 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
PDE6BP35913 ATP5J-204ENST00000400093 1179 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PDE6BP35913 CACYBPP3-201ENST00000406011 625 ntBASIC16.74■□□□□ 0.27
PDE6BP35913 POLR3H-204ENST00000407461 802 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PDE6BP35913 AP001331.1-201ENST00000413008 1015 ntBASIC16.74■□□□□ 0.27
PDE6BP35913 RPL38-202ENST00000439590 431 ntAPPRIS P2 TSL 2 BASIC16.74■□□□□ 0.27
PDE6BP35913 RAB34-211ENST00000450529 1184 ntTSL 2 BASIC16.74■□□□□ 0.27
PDE6BP35913 AL161727.1-201ENST00000457409 530 ntBASIC16.74■□□□□ 0.27
PDE6BP35913 RN7SL2-201ENST00000490232 300 ntBASIC16.74■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms