Protein–RNA interactions for Protein: P32297

CHRNA3, Neuronal acetylcholine receptor subunit alpha-3, humanhuman

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3P32297 FAM167A-AS1-203ENST00000624614 1357 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CHRNA3P32297 CNTLN-201ENST00000380641 4871 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
CHRNA3P32297 TBC1D24-201ENST00000293970 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CHRNA3P32297 MED16-202ENST00000312090 3229 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
CHRNA3P32297 PGAM1P5-202ENST00000552554 2148 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CHRNA3P32297 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CHRNA3P32297 AP002353.1-201ENST00000528257 1599 ntBASIC14.6□□□□□ -0.07
CHRNA3P32297 BX255923.2-202ENST00000620833 2874 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CHRNA3P32297 NAPB-202ENST00000398425 3824 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CHRNA3P32297 RASGEF1B-202ENST00000335927 1756 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CHRNA3P32297 ZNF384-201ENST00000319770 3266 ntTSL 2 BASIC14.6□□□□□ -0.07
CHRNA3P32297 NCOA7-203ENST00000392477 6457 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
CHRNA3P32297 PHF2-203ENST00000610682 2921 ntTSL 5 BASIC14.6□□□□□ -0.07
CHRNA3P32297 RERE-204ENST00000400908 5790 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
CHRNA3P32297 FETUB-207ENST00000450521 1410 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CHRNA3P32297 MAP3K4-203ENST00000366920 5445 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
CHRNA3P32297 NRXN1-207ENST00000404971 7578 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CHRNA3P32297 GRIP2-204ENST00000619221 7977 ntAPPRIS P5 TSL 5 BASIC14.6□□□□□ -0.07
CHRNA3P32297 WNK1-201ENST00000315939 10452 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
CHRNA3P32297 NTM-202ENST00000374786 3190 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CHRNA3P32297 TRIT1-202ENST00000372818 2034 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CHRNA3P32297 OCRL-201ENST00000357121 5138 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CHRNA3P32297 KLC2-206ENST00000417856 3015 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
CHRNA3P32297 MYL12B-201ENST00000237500 1210 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CHRNA3P32297 EWSR1-204ENST00000333395 1265 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CHRNA3P32297 CELA3B-201ENST00000337107 897 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CHRNA3P32297 ELK2AP-201ENST00000392510 1007 ntBASIC14.6□□□□□ -0.07
CHRNA3P32297 CD300A-204ENST00000392625 1163 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CHRNA3P32297 AL672291.1-201ENST00000417047 462 ntTSL 3 BASIC14.6□□□□□ -0.07
CHRNA3P32297 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC14.6□□□□□ -0.07
CHRNA3P32297 AL591684.1-201ENST00000434533 234 ntTSL 5 BASIC14.6□□□□□ -0.07
CHRNA3P32297 HVCN1-203ENST00000439744 1215 ntTSL 2 BASIC14.6□□□□□ -0.07
CHRNA3P32297 AL136982.2-201ENST00000451760 234 ntTSL 5 BASIC14.6□□□□□ -0.07
CHRNA3P32297 AC083949.1-202ENST00000458490 552 ntTSL 3 BASIC14.6□□□□□ -0.07
CHRNA3P32297 AC242376.1-201ENST00000559033 726 ntBASIC14.6□□□□□ -0.07
CHRNA3P32297 MIR4754-201ENST00000582477 89 ntBASIC14.6□□□□□ -0.07
CHRNA3P32297 AC011466.3-201ENST00000596563 852 ntTSL 2 BASIC14.6□□□□□ -0.07
CHRNA3P32297 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC14.6□□□□□ -0.07
CHRNA3P32297 AC012044.1-201ENST00000603431 297 ntBASIC14.6□□□□□ -0.07
CHRNA3P32297 AC022001.2-201ENST00000607849 580 ntTSL 2 BASIC14.6□□□□□ -0.07
CHRNA3P32297 MIR6769A-201ENST00000617340 73 ntBASIC14.6□□□□□ -0.07
CHRNA3P32297 PTK2-202ENST00000395218 4415 ntTSL 5 BASIC14.6□□□□□ -0.07
CHRNA3P32297 AC093462.1-201ENST00000621167 1683 ntBASIC14.6□□□□□ -0.07
CHRNA3P32297 GGA3-214ENST00000582717 2255 ntTSL 2 BASIC14.6□□□□□ -0.07
CHRNA3P32297 LINC00987-201ENST00000427111 2472 ntTSL 2 BASIC14.6□□□□□ -0.07
CHRNA3P32297 PIK3R5-216ENST00000584803 2653 ntAPPRIS ALT1 TSL 5 BASIC14.6□□□□□ -0.07
CHRNA3P32297 HINT3-201ENST00000229633 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CHRNA3P32297 ANXA11-201ENST00000265447 2526 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
CHRNA3P32297 NBPF3-205ENST00000454000 2133 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
CHRNA3P32297 DPAGT1-217ENST00000639704 1719 ntTSL 5 BASIC14.6□□□□□ -0.07
CHRNA3P32297 NIT1-204ENST00000392190 1518 ntAPPRIS ALT1 TSL 3 BASIC14.6□□□□□ -0.07
CHRNA3P32297 METTL17-221ENST00000556670 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
CHRNA3P32297 NOL9-201ENST00000377705 6649 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CHRNA3P32297 LINC01679-201ENST00000442815 2798 ntTSL 3 BASIC14.6□□□□□ -0.07
CHRNA3P32297 PDE9A-202ENST00000328862 1956 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CHRNA3P32297 GABRB2-205ENST00000517901 1779 ntTSL 5 BASIC14.6□□□□□ -0.07
CHRNA3P32297 AC015909.3-201ENST00000572855 1794 ntBASIC14.6□□□□□ -0.07
CHRNA3P32297 ALDH7A1-234ENST00000637782 1773 ntAPPRIS ALT1 TSL 5 BASIC14.6□□□□□ -0.07
CHRNA3P32297 ZNF536-201ENST00000355537 4945 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CHRNA3P32297 CCNB2-201ENST00000288207 1556 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CHRNA3P32297 SMARCE1-205ENST00000431889 1569 ntTSL 2 BASIC14.6□□□□□ -0.07
CHRNA3P32297 SRPRA-201ENST00000332118 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CHRNA3P32297 PRKN-205ENST00000366897 2877 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CHRNA3P32297 CNBP-203ENST00000446936 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CHRNA3P32297 CNBP-204ENST00000451728 1641 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CHRNA3P32297 APOL5-201ENST00000249044 1438 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CHRNA3P32297 SCGN-203ENST00000612225 1402 ntTSL 5 BASIC14.59□□□□□ -0.07
CHRNA3P32297 LINC01815-202ENST00000641468 1409 ntBASIC14.59□□□□□ -0.07
CHRNA3P32297 SLC46A1-208ENST00000618626 5363 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CHRNA3P32297 KCNG4-201ENST00000308251 5179 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CHRNA3P32297 DRG2-202ENST00000395726 1897 ntTSL 5 BASIC14.59□□□□□ -0.07
CHRNA3P32297 CNOT7-211ENST00000523917 1885 ntTSL 2 BASIC14.59□□□□□ -0.07
CHRNA3P32297 AL356275.1-201ENST00000638446 7440 ntTSL 5 BASIC14.59□□□□□ -0.07
CHRNA3P32297 LINC01114-202ENST00000424321 2112 ntTSL 2 BASIC14.59□□□□□ -0.07
CHRNA3P32297 DISC1-221ENST00000620189 6689 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
CHRNA3P32297 UBBP4-202ENST00000584755 1459 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CHRNA3P32297 CSNK1E-201ENST00000359867 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CHRNA3P32297 ODF2L-204ENST00000370566 2155 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
CHRNA3P32297 NUP210P1-201ENST00000357061 876 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CHRNA3P32297 LCMT1-202ENST00000380966 989 ntTSL 2 BASIC14.59□□□□□ -0.07
CHRNA3P32297 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC14.59□□□□□ -0.07
CHRNA3P32297 HLA-DQB2-232ENST00000437316 1214 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
CHRNA3P32297 ATP6V1G2-210ENST00000483251 662 ntTSL 3 BASIC14.59□□□□□ -0.07
CHRNA3P32297 PSORS1C1-206ENST00000547221 655 ntAPPRIS ALT2 TSL 3 BASIC14.59□□□□□ -0.07
CHRNA3P32297 MIR3907-201ENST00000579424 151 ntBASIC14.59□□□□□ -0.07
CHRNA3P32297 MFSD11-218ENST00000591864 446 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CHRNA3P32297 MEG3_2.1-201ENST00000611456 105 ntBASIC14.59□□□□□ -0.07
CHRNA3P32297 AC015967.2-201ENST00000624092 234 ntBASIC14.59□□□□□ -0.07
CHRNA3P32297 AL161773.1-201ENST00000624845 863 ntBASIC14.59□□□□□ -0.07
CHRNA3P32297 AC006435.4-201ENST00000625037 234 ntBASIC14.59□□□□□ -0.07
CHRNA3P32297 AL356737.1-201ENST00000634391 234 ntBASIC14.59□□□□□ -0.07
CHRNA3P32297 SYT12-201ENST00000393946 4534 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
CHRNA3P32297 MAP7D3-201ENST00000316077 4567 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
CHRNA3P32297 WDSUB1-201ENST00000358147 1535 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CHRNA3P32297 GALC-201ENST00000261304 3883 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CHRNA3P32297 NEU3-204ENST00000531509 2468 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CHRNA3P32297 LYN-204ENST00000520220 5808 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CHRNA3P32297 NPFFR1-201ENST00000277942 8921 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
CHRNA3P32297 CCDC138-203ENST00000412964 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
CHRNA3P32297 UBXN11-207ENST00000374223 1312 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 57.7 ms