Protein–RNA interactions for Protein: P13747

HLA-E, HLA class I histocompatibility antigen, alpha chain E, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-EP13747 HSPA8-221ENST00000533540 1826 ntTSL 5 BASIC13.94□□□□□ -0.18
HLA-EP13747 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
HLA-EP13747 PCK2-208ENST00000559250 1804 ntTSL 5 BASIC13.94□□□□□ -0.18
HLA-EP13747 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
HLA-EP13747 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
HLA-EP13747 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
HLA-EP13747 POLR1C-203ENST00000372389 1355 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
HLA-EP13747 PIP5K1B-208ENST00000541509 2664 ntTSL 2 BASIC13.94□□□□□ -0.18
HLA-EP13747 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
HLA-EP13747 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
HLA-EP13747 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
HLA-EP13747 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
HLA-EP13747 CLCN4-201ENST00000380829 2418 ntTSL 5 BASIC13.93□□□□□ -0.18
HLA-EP13747 PPFIA4-203ENST00000367240 6434 ntAPPRIS P5 TSL 5 BASIC13.93□□□□□ -0.18
HLA-EP13747 PPT1-203ENST00000433473 2267 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
HLA-EP13747 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
HLA-EP13747 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC13.93□□□□□ -0.18
HLA-EP13747 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
HLA-EP13747 RNF26-201ENST00000311413 2787 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
HLA-EP13747 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
HLA-EP13747 YWHAE-201ENST00000264335 2211 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
HLA-EP13747 ATP5C1-201ENST00000335698 1078 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
HLA-EP13747 NUDT2-201ENST00000346365 960 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
HLA-EP13747 SURF4-203ENST00000371991 715 ntTSL 3 BASIC13.93□□□□□ -0.18
HLA-EP13747 NUDT2-202ENST00000379155 1002 ntAPPRIS P1 TSL 3 BASIC13.93□□□□□ -0.18
HLA-EP13747 IL18BP-206ENST00000393707 1037 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
HLA-EP13747 LINC01656-201ENST00000415702 630 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
HLA-EP13747 AP001628.2-201ENST00000420273 784 ntTSL 2 BASIC13.93□□□□□ -0.18
HLA-EP13747 AC007279.1-201ENST00000448547 837 ntBASIC13.93□□□□□ -0.18
HLA-EP13747 AL096772.1-201ENST00000451135 781 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
HLA-EP13747 AC063952.3-201ENST00000467756 308 ntBASIC13.93□□□□□ -0.18
HLA-EP13747 LRRC75A-AS1-213ENST00000484836 821 ntTSL 2 BASIC13.93□□□□□ -0.18
HLA-EP13747 AC113391.2-201ENST00000512245 553 ntTSL 4 BASIC13.93□□□□□ -0.18
HLA-EP13747 CHIC2-204ENST00000512964 711 ntTSL 5 BASIC13.93□□□□□ -0.18
HLA-EP13747 AC012158.2-201ENST00000536546 354 ntBASIC13.93□□□□□ -0.18
HLA-EP13747 KRT16P3-202ENST00000580113 1012 ntTSL 3 BASIC13.93□□□□□ -0.18
HLA-EP13747 KRT16P1-203ENST00000581027 1012 ntTSL 5 BASIC13.93□□□□□ -0.18
HLA-EP13747 AC090004.1-201ENST00000608606 653 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
HLA-EP13747 NUDT2-204ENST00000618590 825 ntAPPRIS P1 TSL 3 BASIC13.93□□□□□ -0.18
HLA-EP13747 IFT22-210ENST00000517481 1657 ntTSL 2 BASIC13.93□□□□□ -0.18
HLA-EP13747 LINC01535-206ENST00000592712 1699 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
HLA-EP13747 PLEKHG6-201ENST00000011684 2881 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
HLA-EP13747 CTSV-201ENST00000259470 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
HLA-EP13747 USP3-204ENST00000540797 5474 ntTSL 2 BASIC13.93□□□□□ -0.18
HLA-EP13747 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
HLA-EP13747 TUBA1B-202ENST00000336023 1627 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
HLA-EP13747 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC13.93□□□□□ -0.18
HLA-EP13747 AL359075.1-201ENST00000476232 2921 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
HLA-EP13747 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
HLA-EP13747 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
HLA-EP13747 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
HLA-EP13747 SRP9-201ENST00000304786 1480 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
HLA-EP13747 RCC2P5-201ENST00000492126 1487 ntBASIC13.93□□□□□ -0.18
HLA-EP13747 DHCR24-201ENST00000371269 4250 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
HLA-EP13747 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
HLA-EP13747 FAM120C-201ENST00000328235 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
HLA-EP13747 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
HLA-EP13747 Z98885.2-201ENST00000565177 1567 ntTSL 2 BASIC13.92□□□□□ -0.18
HLA-EP13747 CWC27-201ENST00000381070 2078 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
HLA-EP13747 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC13.92□□□□□ -0.18
HLA-EP13747 AL031056.1-202ENST00000635954 2193 ntTSL 5 BASIC13.92□□□□□ -0.18
HLA-EP13747 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
HLA-EP13747 AC092115.1-201ENST00000566277 1402 ntBASIC13.92□□□□□ -0.18
HLA-EP13747 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
HLA-EP13747 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC13.92□□□□□ -0.18
HLA-EP13747 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC13.92□□□□□ -0.18
HLA-EP13747 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
HLA-EP13747 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC13.92□□□□□ -0.18
HLA-EP13747 MAL-204ENST00000354078 831 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
HLA-EP13747 HIST1H2BK-201ENST00000356950 381 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
HLA-EP13747 TMEM242-201ENST00000367144 1030 ntTSL 2 BASIC13.92□□□□□ -0.18
HLA-EP13747 HMGCLL1-203ENST00000370850 1171 ntTSL 2 BASIC13.92□□□□□ -0.18
HLA-EP13747 CTNNBIP1-201ENST00000377256 451 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
HLA-EP13747 COPS7B-204ENST00000409091 806 ntTSL 5 BASIC13.92□□□□□ -0.18
HLA-EP13747 AC041040.1-201ENST00000425197 460 ntBASIC13.92□□□□□ -0.18
HLA-EP13747 AL365436.2-201ENST00000434112 526 ntTSL 4 BASIC13.92□□□□□ -0.18
HLA-EP13747 CU639417.1-201ENST00000464664 460 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
HLA-EP13747 UBR5-AS1-202ENST00000520820 800 ntTSL 2 BASIC13.92□□□□□ -0.18
HLA-EP13747 C12orf57-204ENST00000540506 551 ntTSL 2 BASIC13.92□□□□□ -0.18
HLA-EP13747 SHBG-210ENST00000572262 984 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
HLA-EP13747 AC095350.1-204ENST00000585405 616 ntTSL 5 BASIC13.92□□□□□ -0.18
HLA-EP13747 H2BFS-201ENST00000599962 460 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
HLA-EP13747 AC026336.4-201ENST00000624565 1050 ntBASIC13.92□□□□□ -0.18
HLA-EP13747 HTR4-213ENST00000631296 1224 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
HLA-EP13747 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
HLA-EP13747 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC13.92□□□□□ -0.18
HLA-EP13747 GLP2R-204ENST00000574745 1882 ntTSL 2 BASIC13.92□□□□□ -0.18
HLA-EP13747 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC13.92□□□□□ -0.18
HLA-EP13747 TRIB2-201ENST00000155926 4391 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
HLA-EP13747 UBE3A-220ENST00000630424 5075 ntAPPRIS P3 TSL 5 BASIC13.92□□□□□ -0.18
HLA-EP13747 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
HLA-EP13747 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
HLA-EP13747 LINC01922-202ENST00000567168 1704 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
HLA-EP13747 OPRL1-202ENST00000349451 3369 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
HLA-EP13747 GNAI2-203ENST00000422163 2407 ntTSL 2 BASIC13.92□□□□□ -0.18
HLA-EP13747 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
HLA-EP13747 FBXO34-201ENST00000313833 3464 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
HLA-EP13747 MDM1-205ENST00000430606 2170 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
HLA-EP13747 PLIN3-207ENST00000592528 2154 ntTSL 2 BASIC13.92□□□□□ -0.18
HLA-EP13747 ZIK1-201ENST00000307468 2510 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 68.4 ms