Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 EXOC6B-201ENST00000272427 5918 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
CD74P04233 AL132642.2-201ENST00000623423 1998 ntBASIC11.62□□□□□ -0.55
CD74P04233 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
CD74P04233 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
CD74P04233 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
CD74P04233 CNN2P8-201ENST00000421872 913 ntBASIC11.62□□□□□ -0.55
CD74P04233 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC11.62□□□□□ -0.55
CD74P04233 HVCN1-203ENST00000439744 1215 ntTSL 2 BASIC11.62□□□□□ -0.55
CD74P04233 UPK1A-AS1-201ENST00000443196 795 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
CD74P04233 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
CD74P04233 ARMCX3-AS1-201ENST00000454228 490 ntTSL 3 BASIC11.62□□□□□ -0.55
CD74P04233 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC11.62□□□□□ -0.55
CD74P04233 LINC02369-202ENST00000540745 801 ntTSL 5 BASIC11.62□□□□□ -0.55
CD74P04233 AL160314.3-201ENST00000556041 767 ntBASIC11.62□□□□□ -0.55
CD74P04233 RPL28-206ENST00000558752 671 ntTSL 3 BASIC11.62□□□□□ -0.55
CD74P04233 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC11.62□□□□□ -0.55
CD74P04233 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC11.62□□□□□ -0.55
CD74P04233 RN7SL455P-201ENST00000580629 282 ntBASIC11.62□□□□□ -0.55
CD74P04233 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC11.62□□□□□ -0.55
CD74P04233 AC005498.2-205ENST00000593218 784 ntBASIC11.62□□□□□ -0.55
CD74P04233 AC004233.3-201ENST00000607794 1269 ntBASIC11.62□□□□□ -0.55
CD74P04233 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
CD74P04233 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
CD74P04233 AC092139.4-201ENST00000624318 2794 ntBASIC11.62□□□□□ -0.55
CD74P04233 RALGDS-203ENST00000372062 3596 ntAPPRIS ALT2 TSL 2 BASIC11.62□□□□□ -0.55
CD74P04233 DANT2-201ENST00000430756 2079 ntTSL 3 BASIC11.62□□□□□ -0.55
CD74P04233 DMBX1-201ENST00000360032 2880 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
CD74P04233 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC11.62□□□□□ -0.55
CD74P04233 FBXL21-202ENST00000467490 1742 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
CD74P04233 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC11.62□□□□□ -0.55
CD74P04233 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC11.62□□□□□ -0.55
CD74P04233 PASK-201ENST00000234040 4572 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
CD74P04233 MOG-225ENST00000431798 1814 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
CD74P04233 ADGRG6-202ENST00000296932 6849 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
CD74P04233 RCC2P5-201ENST00000492126 1487 ntBASIC11.62□□□□□ -0.55
CD74P04233 ASXL1-201ENST00000306058 6591 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
CD74P04233 ZHX2-201ENST00000314393 4624 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
CD74P04233 NRF1-202ENST00000311967 2481 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
CD74P04233 SCARA5-202ENST00000380385 2934 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
CD74P04233 SMARCA2-254ENST00000636903 2471 ntTSL 5 BASIC11.62□□□□□ -0.55
CD74P04233 APAF1-202ENST00000357310 7055 ntAPPRIS ALT1 TSL 5 BASIC11.62□□□□□ -0.55
CD74P04233 CARHSP1-202ENST00000396593 3026 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
CD74P04233 EPRS-201ENST00000366923 5014 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
CD74P04233 SETMAR-205ENST00000425863 1657 ntTSL 2 BASIC11.62□□□□□ -0.55
CD74P04233 INSRR-201ENST00000368195 5101 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
CD74P04233 HERPUD1-203ENST00000379792 1782 ntTSL 5 BASIC11.62□□□□□ -0.55
CD74P04233 CCDC97-201ENST00000269967 3322 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
CD74P04233 PLD5-204ENST00000442594 3305 ntAPPRIS P3 TSL 5 BASIC11.62□□□□□ -0.55
CD74P04233 GAB1-202ENST00000262995 7981 ntAPPRIS P4 TSL 1 (best) BASIC11.61□□□□□ -0.55
CD74P04233 TRO-202ENST00000319167 2326 ntAPPRIS ALT2 TSL 2 BASIC11.61□□□□□ -0.55
CD74P04233 TRO-203ENST00000375022 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
CD74P04233 CACNA1G-233ENST00000515765 6981 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
CD74P04233 STRA6-201ENST00000323940 2864 ntAPPRIS P1 TSL 2 BASIC11.61□□□□□ -0.55
CD74P04233 GOLGA8A-201ENST00000359187 1877 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
CD74P04233 ANKRD20A7P-201ENST00000402318 2414 ntBASIC11.61□□□□□ -0.55
CD74P04233 AL354861.3-201ENST00000600140 2412 ntBASIC11.61□□□□□ -0.55
CD74P04233 PPT2-EGFL8-202ENST00000422437 4181 ntAPPRIS P5 TSL 5 BASIC11.61□□□□□ -0.55
CD74P04233 ARHGAP45-210ENST00000590214 4191 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
CD74P04233 HK3-201ENST00000292432 3066 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
CD74P04233 ENG-201ENST00000344849 3059 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
CD74P04233 TJAP1-201ENST00000259751 2720 ntAPPRIS P1 TSL 2 BASIC11.61□□□□□ -0.55
CD74P04233 PLOD3-201ENST00000223127 2920 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
CD74P04233 CDC42-202ENST00000344548 2256 ntAPPRIS ALT1 TSL 1 (best) BASIC11.61□□□□□ -0.55
CD74P04233 TMED7-201ENST00000456936 3757 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
CD74P04233 PNMA5-204ENST00000452693 3113 ntAPPRIS P2 TSL 2 BASIC11.61□□□□□ -0.55
CD74P04233 PAX8-203ENST00000348715 3966 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
CD74P04233 ITGA2B-201ENST00000262407 3333 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
CD74P04233 IFFO1-206ENST00000465801 2850 ntTSL 5 BASIC11.61□□□□□ -0.55
CD74P04233 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
CD74P04233 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
CD74P04233 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC11.61□□□□□ -0.55
CD74P04233 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC11.61□□□□□ -0.55
CD74P04233 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC11.61□□□□□ -0.55
CD74P04233 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
CD74P04233 RAC2-204ENST00000406508 893 ntTSL 5 BASIC11.61□□□□□ -0.55
CD74P04233 XBP1P1-201ENST00000436573 652 ntBASIC11.61□□□□□ -0.55
CD74P04233 AL109924.1-201ENST00000444586 914 ntTSL 3 BASIC11.61□□□□□ -0.55
CD74P04233 AC007279.1-201ENST00000448547 837 ntBASIC11.61□□□□□ -0.55
CD74P04233 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC11.61□□□□□ -0.55
CD74P04233 GNPDA1-210ENST00000508177 2980 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
CD74P04233 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC11.61□□□□□ -0.55
CD74P04233 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC11.61□□□□□ -0.55
CD74P04233 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC11.61□□□□□ -0.55
CD74P04233 CMC2-204ENST00000562713 573 ntTSL 3 BASIC11.61□□□□□ -0.55
CD74P04233 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
CD74P04233 CMC2-209ENST00000565108 399 ntTSL 2 BASIC11.61□□□□□ -0.55
CD74P04233 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC11.61□□□□□ -0.55
CD74P04233 AC005962.1-201ENST00000584100 773 ntBASIC11.61□□□□□ -0.55
CD74P04233 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
CD74P04233 LARP4-220ENST00000615080 856 ntTSL 5 BASIC11.61□□□□□ -0.55
CD74P04233 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
CD74P04233 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC11.61□□□□□ -0.55
CD74P04233 SLC47A1-201ENST00000270570 3280 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
CD74P04233 PICART1-201ENST00000499842 2533 ntTSL 2 BASIC11.61□□□□□ -0.55
CD74P04233 ABI2-201ENST00000261016 6634 ntTSL 2 BASIC11.61□□□□□ -0.55
CD74P04233 ABI2-203ENST00000261018 6638 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
CD74P04233 RNF123-203ENST00000433785 1555 ntTSL 5 BASIC11.61□□□□□ -0.55
CD74P04233 AC010536.1-201ENST00000538868 2611 ntBASIC11.61□□□□□ -0.55
CD74P04233 NRADDP-202ENST00000641269 1585 ntBASIC11.61□□□□□ -0.55
CD74P04233 TXLNA-201ENST00000373609 5012 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms