Protein–RNA interactions for Protein: P01374

LTA, Lymphotoxin-alpha, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTAP01374 AL449403.1-201ENST00000432783 1577 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
LTAP01374 INSC-205ENST00000525218 1576 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
LTAP01374 AC015712.2-201ENST00000560351 3688 ntTSL 2 BASIC10.42□□□□□ -0.74
LTAP01374 PHB-215ENST00000617874 1908 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
LTAP01374 NIN-206ENST00000453196 6785 ntAPPRIS ALT2 TSL 5 BASIC10.42□□□□□ -0.74
LTAP01374 UBE2I-202ENST00000355803 3253 ntAPPRIS P1 TSL 2 BASIC10.42□□□□□ -0.74
LTAP01374 KCNIP3-201ENST00000295225 2940 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
LTAP01374 LINC01662-201ENST00000342888 1859 ntTSL 2 BASIC10.42□□□□□ -0.74
LTAP01374 SLFNL1-AS1-201ENST00000626479 4800 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
LTAP01374 UBA3-201ENST00000349511 2112 ntAPPRIS ALT1 TSL 2 BASIC10.42□□□□□ -0.74
LTAP01374 TRMT1-202ENST00000357720 2142 ntAPPRIS P3 TSL 2 BASIC10.42□□□□□ -0.74
LTAP01374 BUB1B-PAK6-201ENST00000441369 2767 ntAPPRIS P1 TSL 2 BASIC10.42□□□□□ -0.74
LTAP01374 TNRC6B-203ENST00000402203 3444 ntAPPRIS P3 TSL 1 (best) BASIC10.42□□□□□ -0.74
LTAP01374 LCA5-202ENST00000392959 4719 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
LTAP01374 MYO9A-202ENST00000424560 4008 ntTSL 5 BASIC10.42□□□□□ -0.74
LTAP01374 NRP2-202ENST00000357118 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
LTAP01374 CPN2-201ENST00000323830 3028 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
LTAP01374 TMPRSS13-202ENST00000445164 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
LTAP01374 SNX22-201ENST00000325881 3614 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
LTAP01374 WDR26-201ENST00000414423 6872 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
LTAP01374 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
LTAP01374 AL356130.1-201ENST00000620188 1965 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
LTAP01374 SLC13A4-201ENST00000354042 2897 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
LTAP01374 GSTM3-201ENST00000256594 4046 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
LTAP01374 LINC01749-202ENST00000607802 3408 ntTSL 2 BASIC10.41□□□□□ -0.74
LTAP01374 BAG2-201ENST00000370693 6651 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
LTAP01374 MIS12-202ENST00000573759 2204 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
LTAP01374 DUSP14-205ENST00000614411 2207 ntAPPRIS P1 TSL 2 BASIC10.41□□□□□ -0.74
LTAP01374 GUCY2EP-203ENST00000531117 1918 ntBASIC10.41□□□□□ -0.74
LTAP01374 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
LTAP01374 MED15-201ENST00000263205 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
LTAP01374 FRMD6-203ENST00000395718 4828 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
LTAP01374 CPT1C-217ENST00000598293 2767 ntAPPRIS P3 TSL 2 BASIC10.41□□□□□ -0.74
LTAP01374 PIAS2-201ENST00000324794 4543 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
LTAP01374 ZCCHC8-207ENST00000543897 5663 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
LTAP01374 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
LTAP01374 AC006001.1-201ENST00000325130 474 ntBASIC10.41□□□□□ -0.74
LTAP01374 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
LTAP01374 INO80C-202ENST00000334598 974 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
LTAP01374 LMO1-201ENST00000335790 1279 ntAPPRIS P3 TSL 1 (best) BASIC10.41□□□□□ -0.74
LTAP01374 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC10.41□□□□□ -0.74
LTAP01374 ZYX-203ENST00000392910 2123 ntAPPRIS ALT2 TSL 2 BASIC10.41□□□□□ -0.74
LTAP01374 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
LTAP01374 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC10.41□□□□□ -0.74
LTAP01374 AC016694.1-201ENST00000434179 700 ntBASIC10.41□□□□□ -0.74
LTAP01374 AC011742.3-201ENST00000439053 820 ntBASIC10.41□□□□□ -0.74
LTAP01374 AL109924.1-201ENST00000444586 914 ntTSL 3 BASIC10.41□□□□□ -0.74
LTAP01374 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
LTAP01374 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC10.41□□□□□ -0.74
LTAP01374 HNRNPA1P36-201ENST00000521313 955 ntBASIC10.41□□□□□ -0.74
LTAP01374 DPYSL2-206ENST00000523027 2130 ntTSL 2 BASIC10.41□□□□□ -0.74
LTAP01374 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC10.41□□□□□ -0.74
LTAP01374 LMO1-204ENST00000534484 770 ntAPPRIS ALT1 TSL 5 BASIC10.41□□□□□ -0.74
LTAP01374 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
LTAP01374 LINC02369-202ENST00000540745 801 ntTSL 5 BASIC10.41□□□□□ -0.74
LTAP01374 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC10.41□□□□□ -0.74
LTAP01374 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC10.41□□□□□ -0.74
LTAP01374 CMC2-204ENST00000562713 573 ntTSL 3 BASIC10.41□□□□□ -0.74
LTAP01374 CMC2-209ENST00000565108 399 ntTSL 2 BASIC10.41□□□□□ -0.74
LTAP01374 MIR3940-201ENST00000579148 102 ntBASIC10.41□□□□□ -0.74
LTAP01374 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC10.41□□□□□ -0.74
LTAP01374 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC10.41□□□□□ -0.74
LTAP01374 SH3PXD2B-201ENST00000311601 7777 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
LTAP01374 TRPA1-201ENST00000262209 5223 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
LTAP01374 ZNF706-209ENST00000520347 3502 ntAPPRIS P1 TSL 2 BASIC10.41□□□□□ -0.74
LTAP01374 ARMCX6-201ENST00000361910 1846 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
LTAP01374 BEST1-208ENST00000534553 1829 ntTSL 2 BASIC10.41□□□□□ -0.74
LTAP01374 PLEKHB2-202ENST00000403716 4349 ntTSL 3 BASIC10.41□□□□□ -0.74
LTAP01374 CWC27-201ENST00000381070 2078 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
LTAP01374 C3orf38-201ENST00000318887 2633 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
LTAP01374 TNS1-205ENST00000419504 5921 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
LTAP01374 TNS1-207ENST00000430930 5900 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
LTAP01374 CAPRIN1-212ENST00000532820 3438 ntAPPRIS P4 TSL 1 (best) BASIC10.41□□□□□ -0.74
LTAP01374 AC139795.2-201ENST00000499900 1751 ntTSL 2 BASIC10.41□□□□□ -0.74
LTAP01374 RSPO2-201ENST00000276659 3111 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
LTAP01374 SLC26A6-205ENST00000395550 2589 ntAPPRIS P3 TSL 1 (best) BASIC10.41□□□□□ -0.74
LTAP01374 SCRN1-207ENST00000434476 1454 ntTSL 2 BASIC10.41□□□□□ -0.74
LTAP01374 PLD5-204ENST00000442594 3305 ntAPPRIS P3 TSL 5 BASIC10.41□□□□□ -0.74
LTAP01374 FBLN1-208ENST00000442170 2531 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
LTAP01374 FBXL21-202ENST00000467490 1742 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
LTAP01374 AC018629.1-201ENST00000623381 1736 ntBASIC10.41□□□□□ -0.74
LTAP01374 LINC01649-202ENST00000634255 1743 ntTSL 5 BASIC10.41□□□□□ -0.74
LTAP01374 SLC47A1-201ENST00000270570 3280 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
LTAP01374 MAP2-201ENST00000199940 2241 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
LTAP01374 EPM2A-218ENST00000639465 2203 ntTSL 5 BASIC10.41□□□□□ -0.74
LTAP01374 AP2A2-202ENST00000448903 4575 ntAPPRIS P3 TSL 1 (best) BASIC10.41□□□□□ -0.74
LTAP01374 TRO-225ENST00000622017 1403 ntAPPRIS ALT2 TSL 5 BASIC10.41□□□□□ -0.74
LTAP01374 C10orf90-202ENST00000356858 2995 ntAPPRIS ALT2 TSL 5 BASIC10.41□□□□□ -0.74
LTAP01374 MAX-212ENST00000555932 1673 ntTSL 5 BASIC10.41□□□□□ -0.74
LTAP01374 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
LTAP01374 GK-203ENST00000378943 3707 ntAPPRIS ALT1 TSL 1 (best) BASIC10.41□□□□□ -0.74
LTAP01374 TARS2-205ENST00000438568 2188 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
LTAP01374 DCAF13-201ENST00000297579 2642 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
LTAP01374 EPS8L3-201ENST00000361852 2130 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
LTAP01374 ATL2-201ENST00000378954 2868 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
LTAP01374 FSTL1-202ENST00000424703 1396 ntTSL 2 BASIC10.4□□□□□ -0.74
LTAP01374 CYP11B1-204ENST00000517471 1874 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
LTAP01374 TNK1-201ENST00000570896 3122 ntAPPRIS P3 TSL 5 BASIC10.4□□□□□ -0.74
LTAP01374 ANO6-203ENST00000425752 3558 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
LTAP01374 RBM22P2-201ENST00000393978 1814 ntBASIC10.4□□□□□ -0.74
Retrieved 100 of 98,524 protein–RNA pairs in 73.6 ms