Protein–RNA interactions for Protein: O00533

CHL1, Neural cell adhesion molecule L1-like protein, humanhuman

Predictions only

Length 1,208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHL1O00533 AC078785.1-204ENST00000460707 764 ntTSL 3 BASIC17.47■□□□□ 0.39
CHL1O00533 TCEAL4-206ENST00000468024 1135 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
CHL1O00533 NDUFB2P1-201ENST00000506966 295 ntBASIC17.47■□□□□ 0.39
CHL1O00533 FAM86B3P-203ENST00000523992 854 ntBASIC17.47■□□□□ 0.39
CHL1O00533 SP6-202ENST00000536300 3848 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
CHL1O00533 AC012379.2-201ENST00000560237 765 ntTSL 2 BASIC17.47■□□□□ 0.39
CHL1O00533 AP003071.1-201ENST00000567925 622 ntTSL 3 BASIC17.47■□□□□ 0.39
CHL1O00533 ETV4-208ENST00000586826 917 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CHL1O00533 Metazoa_SRP.153-201ENST00000620153 341 ntBASIC17.47■□□□□ 0.39
CHL1O00533 PROX1-AS1-235ENST00000628896 711 ntTSL 5 BASIC17.47■□□□□ 0.39
CHL1O00533 ADH1B-207ENST00000639454 1210 ntTSL 5 BASIC17.47■□□□□ 0.39
CHL1O00533 KIAA0895-203ENST00000338533 4132 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CHL1O00533 ZSCAN5DP-201ENST00000600684 1488 ntBASIC17.47■□□□□ 0.39
CHL1O00533 CHMP4C-201ENST00000297265 1866 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CHL1O00533 ZNF595-203ENST00000608255 1999 ntTSL 2 BASIC17.47■□□□□ 0.39
CHL1O00533 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CHL1O00533 LINC00863-201ENST00000439559 3287 ntTSL 5 BASIC17.47■□□□□ 0.39
CHL1O00533 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CHL1O00533 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CHL1O00533 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CHL1O00533 TOX2-202ENST00000358131 2605 ntTSL 2 BASIC17.47■□□□□ 0.39
CHL1O00533 AC022028.2-201ENST00000474115 2619 ntTSL 2 BASIC17.47■□□□□ 0.39
CHL1O00533 AC073862.5-201ENST00000624129 2027 ntBASIC17.47■□□□□ 0.39
CHL1O00533 AC007666.1-201ENST00000443935 1838 ntTSL 5 BASIC17.47■□□□□ 0.39
CHL1O00533 SRL-202ENST00000537996 1814 ntTSL 2 BASIC17.47■□□□□ 0.39
CHL1O00533 ZNF683-205ENST00000436292 1712 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
CHL1O00533 ARRDC5-201ENST00000381781 1638 ntAPPRIS P1 TSL 3 BASIC17.47■□□□□ 0.39
CHL1O00533 TMEM9B-202ENST00000525069 1433 ntTSL 2 BASIC17.47■□□□□ 0.39
CHL1O00533 CCDC159-209ENST00000588790 1408 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
CHL1O00533 TRIB1-203ENST00000520847 1332 ntTSL 2 BASIC17.47■□□□□ 0.39
CHL1O00533 FAM129B-202ENST00000373314 3760 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CHL1O00533 ATP2B2-210ENST00000638646 3465 ntTSL 5 BASIC17.46■□□□□ 0.39
CHL1O00533 OS9-203ENST00000389142 2457 ntTSL 5 BASIC17.46■□□□□ 0.39
CHL1O00533 NEK4-207ENST00000535191 2452 ntTSL 2 BASIC17.46■□□□□ 0.39
CHL1O00533 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
CHL1O00533 AGAP5-201ENST00000374094 2394 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CHL1O00533 MMD2-203ENST00000406755 2372 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CHL1O00533 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC17.46■□□□□ 0.39
CHL1O00533 DNAJB13-201ENST00000339764 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CHL1O00533 PPP2R1B-204ENST00000426998 1888 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
CHL1O00533 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CHL1O00533 TRAPPC4-214ENST00000533632 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CHL1O00533 DDX19B-208ENST00000563392 1760 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CHL1O00533 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CHL1O00533 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CHL1O00533 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
CHL1O00533 PTN-202ENST00000393083 1599 ntTSL 5 BASIC17.46■□□□□ 0.39
CHL1O00533 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CHL1O00533 IL19-201ENST00000270218 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CHL1O00533 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC17.46■□□□□ 0.39
CHL1O00533 FTO-214ENST00000636218 2227 ntTSL 5 BASIC17.46■□□□□ 0.39
CHL1O00533 DHRS7C-201ENST00000330255 1006 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
CHL1O00533 MIR566-201ENST00000385187 94 ntBASIC17.46■□□□□ 0.39
CHL1O00533 GRP-202ENST00000420468 579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CHL1O00533 IQCF4-202ENST00000422896 745 ntTSL 2 BASIC17.46■□□□□ 0.39
CHL1O00533 AC063952.3-201ENST00000467756 308 ntBASIC17.46■□□□□ 0.39
CHL1O00533 VEGFA-219ENST00000518824 606 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CHL1O00533 AP000920.1-201ENST00000531824 344 ntBASIC17.46■□□□□ 0.39
CHL1O00533 LINC01569-203ENST00000573268 694 ntTSL 3 BASIC17.46■□□□□ 0.39
CHL1O00533 ZNF737-204ENST00000596797 569 ntTSL 4 BASIC17.46■□□□□ 0.39
CHL1O00533 ALDOA-229ENST00000636698 420 ntTSL 3 BASIC17.46■□□□□ 0.39
CHL1O00533 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CHL1O00533 PDXDC1-218ENST00000627450 2683 ntTSL 2 BASIC17.46■□□□□ 0.39
CHL1O00533 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC17.46■□□□□ 0.39
CHL1O00533 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
CHL1O00533 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
CHL1O00533 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC17.46■□□□□ 0.39
CHL1O00533 SLC26A8-202ENST00000394602 3144 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CHL1O00533 DRD3-201ENST00000295881 1541 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
CHL1O00533 KIR3DL1-203ENST00000391728 1871 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.38
CHL1O00533 C8orf31-201ENST00000395172 1875 ntTSL 2 BASIC17.46■□□□□ 0.38
CHL1O00533 CPA5-203ENST00000461828 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CHL1O00533 ATG3-202ENST00000402314 3010 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CHL1O00533 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CHL1O00533 KLHL13-204ENST00000371882 3256 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CHL1O00533 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC17.45■□□□□ 0.38
CHL1O00533 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC17.45■□□□□ 0.38
CHL1O00533 MKL1-212ENST00000618417 1842 ntTSL 5 BASIC17.45■□□□□ 0.38
CHL1O00533 PRAME-202ENST00000398743 2196 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CHL1O00533 SERPING1-202ENST00000340687 1719 ntTSL 5 BASIC17.45■□□□□ 0.38
CHL1O00533 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CHL1O00533 ZMAT5-201ENST00000344318 899 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CHL1O00533 DIO1-203ENST00000388876 606 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CHL1O00533 S100A13-203ENST00000392623 579 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
CHL1O00533 LINC01523-201ENST00000425385 450 ntTSL 2 BASIC17.45■□□□□ 0.38
CHL1O00533 CD37-203ENST00000426897 1204 ntTSL 2 BASIC17.45■□□□□ 0.38
CHL1O00533 KRT17P4-201ENST00000429445 819 ntBASIC17.45■□□□□ 0.38
CHL1O00533 ESRRAP2-203ENST00000453309 822 ntTSL 5 BASIC17.45■□□□□ 0.38
CHL1O00533 AL928742.1-201ENST00000497397 548 ntTSL 4 BASIC17.45■□□□□ 0.38
CHL1O00533 PTK2-225ENST00000520892 571 ntTSL 4 BASIC17.45■□□□□ 0.38
CHL1O00533 DIO1-204ENST00000524406 626 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CHL1O00533 LINC00301-203ENST00000527161 749 ntTSL 2 BASIC17.45■□□□□ 0.38
CHL1O00533 DIO1-213ENST00000532493 406 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CHL1O00533 AC023968.2-201ENST00000560593 1049 ntBASIC17.45■□□□□ 0.38
CHL1O00533 TYMSP2-201ENST00000589501 424 ntBASIC17.45■□□□□ 0.38
CHL1O00533 AC010127.1-202ENST00000597623 713 ntTSL 2 BASIC17.45■□□□□ 0.38
CHL1O00533 AC011298.1-201ENST00000407635 3398 ntTSL 2 BASIC17.45■□□□□ 0.38
CHL1O00533 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CHL1O00533 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CHL1O00533 KCNV1-201ENST00000297404 2927 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms