Protein–RNA interactions for Protein: A6NHC0

CAPN8, Calpain-8, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN8A6NHC0 TCEA3-201ENST00000374601 1197 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CAPN8A6NHC0 PTTG1IP-202ENST00000397886 755 ntTSL 4 BASIC14.1□□□□□ -0.15
CAPN8A6NHC0 ZNF226-203ENST00000413984 716 ntTSL 3 BASIC14.1□□□□□ -0.15
CAPN8A6NHC0 RPL13AP19-201ENST00000434320 584 ntBASIC14.1□□□□□ -0.15
CAPN8A6NHC0 SPRY4-AS1-203ENST00000443800 566 ntTSL 3 BASIC14.1□□□□□ -0.15
CAPN8A6NHC0 TIMP1-205ENST00000456754 1095 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CAPN8A6NHC0 NDUFS6P1-201ENST00000485187 316 ntBASIC14.1□□□□□ -0.15
CAPN8A6NHC0 SEC61B-203ENST00000498603 587 ntTSL 3 BASIC14.1□□□□□ -0.15
CAPN8A6NHC0 SERGEF-208ENST00000528200 1264 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CAPN8A6NHC0 MRPS10-201ENST00000053468 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CAPN8A6NHC0 PTGR1-209ENST00000538962 1200 ntTSL 2 BASIC14.1□□□□□ -0.15
CAPN8A6NHC0 KLF17P1-201ENST00000547105 1126 ntBASIC14.1□□□□□ -0.15
CAPN8A6NHC0 AC025154.2-201ENST00000550530 445 ntTSL 3 BASIC14.1□□□□□ -0.15
CAPN8A6NHC0 DNM1P30-201ENST00000563586 452 ntBASIC14.1□□□□□ -0.15
CAPN8A6NHC0 AC011479.1-202ENST00000591889 528 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
CAPN8A6NHC0 AL031665.1-201ENST00000619766 572 ntTSL 4 BASIC14.1□□□□□ -0.15
CAPN8A6NHC0 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CAPN8A6NHC0 PHF8-202ENST00000338154 6062 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
CAPN8A6NHC0 TP73-207ENST00000378290 1831 ntTSL 2 BASIC14.1□□□□□ -0.15
CAPN8A6NHC0 VIPAS39-208ENST00000556412 1832 ntTSL 2 BASIC14.1□□□□□ -0.15
CAPN8A6NHC0 CPSF1-212ENST00000616140 4494 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CAPN8A6NHC0 ALOX15B-202ENST00000380183 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CAPN8A6NHC0 DACT3-AS1-201ENST00000500689 1304 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CAPN8A6NHC0 TEKT4P2-202ENST00000559466 1312 ntBASIC14.1□□□□□ -0.15
CAPN8A6NHC0 TMPO-202ENST00000266732 3615 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CAPN8A6NHC0 PAX8-204ENST00000397647 3633 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CAPN8A6NHC0 SH2D3C-201ENST00000314830 3124 ntAPPRIS P4 TSL 1 (best) BASIC14.1□□□□□ -0.15
CAPN8A6NHC0 SLC37A3-201ENST00000326232 3349 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CAPN8A6NHC0 ZNF721-205ENST00000511833 2966 ntAPPRIS P1 TSL 4 BASIC14.1□□□□□ -0.15
CAPN8A6NHC0 CYTH2-203ENST00000427476 4606 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CAPN8A6NHC0 NOB1-201ENST00000268802 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CAPN8A6NHC0 METTL17-201ENST00000339374 1749 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
CAPN8A6NHC0 SLC4A8-205ENST00000535225 2262 ntTSL 2 BASIC14.1□□□□□ -0.15
CAPN8A6NHC0 MED16-202ENST00000312090 3229 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
CAPN8A6NHC0 PHACTR2-202ENST00000367582 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
CAPN8A6NHC0 LIPA-205ENST00000456827 2527 ntTSL 3 BASIC14.09□□□□□ -0.15
CAPN8A6NHC0 AL121827.1-201ENST00000370257 3264 ntTSL 2 BASIC14.09□□□□□ -0.15
CAPN8A6NHC0 PTH2R-201ENST00000272847 2713 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CAPN8A6NHC0 PCDHGA11-201ENST00000398587 4647 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
CAPN8A6NHC0 SMAGP-203ENST00000603798 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CAPN8A6NHC0 RPP30-202ENST00000371703 2589 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CAPN8A6NHC0 KCNIP1-210ENST00000636734 1613 ntTSL 5 BASIC14.09□□□□□ -0.15
CAPN8A6NHC0 SLC39A11-202ENST00000542342 2752 ntAPPRIS ALT1 TSL 2 BASIC14.09□□□□□ -0.15
CAPN8A6NHC0 MEX3B-202ENST00000558133 4333 ntBASIC14.09□□□□□ -0.15
CAPN8A6NHC0 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC14.09□□□□□ -0.15
CAPN8A6NHC0 HMGCS2-201ENST00000369406 2428 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CAPN8A6NHC0 MROH2A-201ENST00000389758 5355 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
CAPN8A6NHC0 RPS9-201ENST00000302907 829 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CAPN8A6NHC0 PIGF-202ENST00000306465 1061 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CAPN8A6NHC0 TRBJ2-6-201ENST00000390418 53 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
CAPN8A6NHC0 MYL3-202ENST00000395869 1012 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CAPN8A6NHC0 HPGD-203ENST00000422112 805 ntTSL 2 BASIC14.09□□□□□ -0.15
CAPN8A6NHC0 AL592076.1-201ENST00000424448 303 ntBASIC14.09□□□□□ -0.15
CAPN8A6NHC0 TEX36-AS1-202ENST00000446081 749 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CAPN8A6NHC0 KRT18P66-201ENST00000452970 1269 ntBASIC14.09□□□□□ -0.15
CAPN8A6NHC0 AL355376.1-201ENST00000456082 517 ntTSL 3 BASIC14.09□□□□□ -0.15
CAPN8A6NHC0 LINC01563-201ENST00000456235 750 ntTSL 2 BASIC14.09□□□□□ -0.15
CAPN8A6NHC0 EFCAB10-201ENST00000460135 717 ntTSL 2 BASIC14.09□□□□□ -0.15
CAPN8A6NHC0 PGAP2-212ENST00000464906 1259 ntTSL 2 BASIC14.09□□□□□ -0.15
CAPN8A6NHC0 CTBP2P4-201ENST00000513884 920 ntBASIC14.09□□□□□ -0.15
CAPN8A6NHC0 TVP23C-205ENST00000518321 1080 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
CAPN8A6NHC0 PTK2-225ENST00000520892 571 ntTSL 4 BASIC14.09□□□□□ -0.15
CAPN8A6NHC0 CFL1-206ENST00000527344 962 ntTSL 2 BASIC14.09□□□□□ -0.15
CAPN8A6NHC0 SIRT3-210ENST00000529382 1225 ntTSL 2 BASIC14.09□□□□□ -0.15
CAPN8A6NHC0 AC135782.2-201ENST00000562040 472 ntTSL 3 BASIC14.09□□□□□ -0.15
CAPN8A6NHC0 HS3ST3A1-202ENST00000578576 750 ntTSL 3 BASIC14.09□□□□□ -0.15
CAPN8A6NHC0 RNASEK-210ENST00000593646 566 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CAPN8A6NHC0 SIGLEC22P-201ENST00000599104 714 ntBASIC14.09□□□□□ -0.15
CAPN8A6NHC0 SIGLEC22P-202ENST00000602065 544 ntTSL 4 BASIC14.09□□□□□ -0.15
CAPN8A6NHC0 WT1-AS_6.1-201ENST00000614919 121 ntBASIC14.09□□□□□ -0.15
CAPN8A6NHC0 CR392039.2-201ENST00000623182 509 ntBASIC14.09□□□□□ -0.15
CAPN8A6NHC0 AC138969.2-201ENST00000532739 9932 ntBASIC14.09□□□□□ -0.15
CAPN8A6NHC0 ZNF395-201ENST00000344423 4808 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CAPN8A6NHC0 CYB5D1-203ENST00000571846 1870 ntTSL 5 BASIC14.09□□□□□ -0.15
CAPN8A6NHC0 GFI1B-207ENST00000636137 1870 ntTSL 5 BASIC14.09□□□□□ -0.15
CAPN8A6NHC0 ARMCX3-203ENST00000471229 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CAPN8A6NHC0 FARP2-201ENST00000264042 4051 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CAPN8A6NHC0 TSPEAR-AS1-202ENST00000451035 2108 ntTSL 5 BASIC14.09□□□□□ -0.15
CAPN8A6NHC0 AC010096.1-201ENST00000443897 1709 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CAPN8A6NHC0 HLA-DQB1-202ENST00000399079 1501 ntBASIC14.09□□□□□ -0.15
CAPN8A6NHC0 RIPOR1-204ENST00000428437 4152 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
CAPN8A6NHC0 GTF2IRD2B-203ENST00000472837 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CAPN8A6NHC0 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
CAPN8A6NHC0 TMEM87A-201ENST00000307216 1598 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CAPN8A6NHC0 CREB3L4-204ENST00000368603 1557 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
CAPN8A6NHC0 MYH16-204ENST00000452010 1599 ntTSL 5 BASIC14.09□□□□□ -0.15
CAPN8A6NHC0 SHOX-202ENST00000381575 1351 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CAPN8A6NHC0 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC14.09□□□□□ -0.15
CAPN8A6NHC0 CCT2-201ENST00000299300 2041 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
CAPN8A6NHC0 CRACR2A-203ENST00000440314 2697 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.15
CAPN8A6NHC0 GJB1-201ENST00000361726 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
CAPN8A6NHC0 ATP6V0A4-202ENST00000353492 2709 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
CAPN8A6NHC0 UBE2E2-202ENST00000396703 2748 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
CAPN8A6NHC0 TARBP2-202ENST00000394357 1402 ntTSL 3 BASIC14.08□□□□□ -0.15
CAPN8A6NHC0 ATF4-202ENST00000396680 1419 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
CAPN8A6NHC0 SLC47A1-206ENST00000571335 1415 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
CAPN8A6NHC0 MEIKIN-205ENST00000616644 1438 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.15
CAPN8A6NHC0 KAZN-205ENST00000400798 3643 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
CAPN8A6NHC0 LDB3-207ENST00000542786 1889 ntTSL 2 BASIC14.08□□□□□ -0.16
CAPN8A6NHC0 GPNMB-203ENST00000409458 1673 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms