Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 SEPT7-AS1-201ENST00000412856 587 ntTSL 4 BASIC14.49□□□□□ -0.09
SHKBP1Q8TBC3 FAM21EP-201ENST00000417804 985 ntBASIC14.49□□□□□ -0.09
SHKBP1Q8TBC3 EMP1-203ENST00000431267 1039 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
SHKBP1Q8TBC3 AC005722.1-201ENST00000431878 964 ntBASIC14.49□□□□□ -0.09
SHKBP1Q8TBC3 AC063952.3-201ENST00000467756 308 ntBASIC14.49□□□□□ -0.09
SHKBP1Q8TBC3 C21orf62-204ENST00000490358 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
SHKBP1Q8TBC3 DMKN-256ENST00000492341 738 ntAPPRIS ALT2 TSL 2 BASIC14.49□□□□□ -0.09
SHKBP1Q8TBC3 CYP4F36P-201ENST00000589193 186 ntBASIC14.49□□□□□ -0.09
SHKBP1Q8TBC3 AL136982.5-201ENST00000605222 294 ntBASIC14.49□□□□□ -0.09
SHKBP1Q8TBC3 ETV2-207ENST00000619399 994 ntTSL 5 BASIC14.49□□□□□ -0.09
SHKBP1Q8TBC3 ANKRD36C-208ENST00000619511 737 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
SHKBP1Q8TBC3 LINC01726-201ENST00000624692 1253 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
SHKBP1Q8TBC3 AC027288.3-202ENST00000550268 1820 ntTSL 2 BASIC14.49□□□□□ -0.09
SHKBP1Q8TBC3 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
SHKBP1Q8TBC3 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
SHKBP1Q8TBC3 TMPRSS6-203ENST00000406725 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
SHKBP1Q8TBC3 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
SHKBP1Q8TBC3 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
SHKBP1Q8TBC3 LRSAM1-203ENST00000373322 2849 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
SHKBP1Q8TBC3 RMDN1-201ENST00000406452 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
SHKBP1Q8TBC3 KIAA1614-201ENST00000367587 3309 ntTSL 2 BASIC14.49□□□□□ -0.09
SHKBP1Q8TBC3 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
SHKBP1Q8TBC3 OR2A25-202ENST00000641441 1733 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
SHKBP1Q8TBC3 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
SHKBP1Q8TBC3 CFAP65-203ENST00000409865 2769 ntAPPRIS ALT2 TSL 2 BASIC14.49□□□□□ -0.09
SHKBP1Q8TBC3 EML1-203ENST00000334192 4064 ntTSL 5 BASIC14.49□□□□□ -0.09
SHKBP1Q8TBC3 INTS5-201ENST00000330574 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
SHKBP1Q8TBC3 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
SHKBP1Q8TBC3 CERCAM-214ENST00000613052 1429 ntTSL 5 BASIC14.49□□□□□ -0.09
SHKBP1Q8TBC3 LPO-201ENST00000262290 2979 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
SHKBP1Q8TBC3 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC14.49□□□□□ -0.09
SHKBP1Q8TBC3 LIG1-203ENST00000536218 3179 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
SHKBP1Q8TBC3 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
SHKBP1Q8TBC3 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SHKBP1Q8TBC3 C8orf31-201ENST00000395172 1875 ntTSL 2 BASIC14.48□□□□□ -0.09
SHKBP1Q8TBC3 AC004997.1-205ENST00000447976 1851 ntTSL 2 BASIC14.48□□□□□ -0.09
SHKBP1Q8TBC3 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
SHKBP1Q8TBC3 FGGY-204ENST00000371218 2052 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
SHKBP1Q8TBC3 LINC01792-201ENST00000452787 2050 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
SHKBP1Q8TBC3 LINC02486-201ENST00000604157 3000 ntBASIC14.48□□□□□ -0.09
SHKBP1Q8TBC3 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC14.48□□□□□ -0.09
SHKBP1Q8TBC3 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC14.48□□□□□ -0.09
SHKBP1Q8TBC3 SLC52A1-203ENST00000512825 2989 ntTSL 2 BASIC14.48□□□□□ -0.09
SHKBP1Q8TBC3 HEXA-206ENST00000566304 1795 ntTSL 2 BASIC14.48□□□□□ -0.09
SHKBP1Q8TBC3 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SHKBP1Q8TBC3 AL117190.1-201ENST00000637474 1985 ntTSL 5 BASIC14.48□□□□□ -0.09
SHKBP1Q8TBC3 POLR2G-201ENST00000301788 827 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SHKBP1Q8TBC3 EPPIN-201ENST00000336443 1217 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
SHKBP1Q8TBC3 PKIG-201ENST00000349959 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SHKBP1Q8TBC3 COA6-203ENST00000366615 710 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
SHKBP1Q8TBC3 HCRTR1-201ENST00000373705 1170 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
SHKBP1Q8TBC3 DKKL1P1-201ENST00000400550 698 ntBASIC14.48□□□□□ -0.09
SHKBP1Q8TBC3 VPREB1-202ENST00000403807 755 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
SHKBP1Q8TBC3 ACTBP14-201ENST00000411655 1089 ntBASIC14.48□□□□□ -0.09
SHKBP1Q8TBC3 OR51A9P-201ENST00000422578 911 ntBASIC14.48□□□□□ -0.09
SHKBP1Q8TBC3 KRT18P4-201ENST00000422599 1288 ntBASIC14.48□□□□□ -0.09
SHKBP1Q8TBC3 AC147651.3-201ENST00000429872 731 ntTSL 2 BASIC14.48□□□□□ -0.09
SHKBP1Q8TBC3 ASS1P2-201ENST00000439895 1223 ntBASIC14.48□□□□□ -0.09
SHKBP1Q8TBC3 AC061961.1-201ENST00000443901 432 ntTSL 3 BASIC14.48□□□□□ -0.09
SHKBP1Q8TBC3 AC244197.1-201ENST00000456494 951 ntBASIC14.48□□□□□ -0.09
SHKBP1Q8TBC3 HNRNPA1P56-201ENST00000505767 954 ntBASIC14.48□□□□□ -0.09
SHKBP1Q8TBC3 AC113391.2-201ENST00000512245 553 ntTSL 4 BASIC14.48□□□□□ -0.09
SHKBP1Q8TBC3 FXYD6-FXYD2-201ENST00000532984 670 ntTSL 3 BASIC14.48□□□□□ -0.09
SHKBP1Q8TBC3 MT3-202ENST00000561640 514 ntTSL 3 BASIC14.48□□□□□ -0.09
SHKBP1Q8TBC3 ANKRD20A21P-201ENST00000611282 517 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
SHKBP1Q8TBC3 AC073578.2-201ENST00000618927 464 ntTSL 4 BASIC14.48□□□□□ -0.09
SHKBP1Q8TBC3 CCL3L3-203ENST00000619989 784 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SHKBP1Q8TBC3 Metazoa_SRP.157-201ENST00000622819 262 ntBASIC14.48□□□□□ -0.09
SHKBP1Q8TBC3 GARS-210ENST00000627489 324 ntTSL 4 BASIC14.48□□□□□ -0.09
SHKBP1Q8TBC3 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC14.48□□□□□ -0.09
SHKBP1Q8TBC3 HELLS-202ENST00000348459 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SHKBP1Q8TBC3 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
SHKBP1Q8TBC3 ALAS1-204ENST00000469224 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SHKBP1Q8TBC3 SLC6A6P1-201ENST00000413933 1850 ntBASIC14.48□□□□□ -0.09
SHKBP1Q8TBC3 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SHKBP1Q8TBC3 RNF34-211ENST00000613529 1449 ntTSL 2 BASIC14.48□□□□□ -0.09
SHKBP1Q8TBC3 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC14.48□□□□□ -0.09
SHKBP1Q8TBC3 RERG-201ENST00000256953 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SHKBP1Q8TBC3 PVR-205ENST00000425690 3325 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
SHKBP1Q8TBC3 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC14.47□□□□□ -0.09
SHKBP1Q8TBC3 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SHKBP1Q8TBC3 VPS9D1-202ENST00000561976 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
SHKBP1Q8TBC3 PSMC4-202ENST00000455878 1333 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
SHKBP1Q8TBC3 COQ4-201ENST00000300452 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SHKBP1Q8TBC3 DDC-204ENST00000426377 1700 ntTSL 3 BASIC14.47□□□□□ -0.09
SHKBP1Q8TBC3 MECP2-217ENST00000628176 1712 ntTSL 3 BASIC14.47□□□□□ -0.09
SHKBP1Q8TBC3 SPOCK3-218ENST00000511531 2908 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
SHKBP1Q8TBC3 AGBL2-205ENST00000528244 2929 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
SHKBP1Q8TBC3 PHF2-203ENST00000610682 2921 ntTSL 5 BASIC14.47□□□□□ -0.09
SHKBP1Q8TBC3 TMEM123-201ENST00000361236 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
SHKBP1Q8TBC3 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC14.47□□□□□ -0.09
SHKBP1Q8TBC3 BEGAIN-212ENST00000637716 3259 ntAPPRIS P5 TSL 5 BASIC14.47□□□□□ -0.09
SHKBP1Q8TBC3 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SHKBP1Q8TBC3 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
SHKBP1Q8TBC3 RCC2P1-201ENST00000452257 1476 ntBASIC14.47□□□□□ -0.09
SHKBP1Q8TBC3 KCNK18-201ENST00000334549 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SHKBP1Q8TBC3 MIR566-201ENST00000385187 94 ntBASIC14.47□□□□□ -0.09
SHKBP1Q8TBC3 RPA3-202ENST00000396682 847 ntAPPRIS P1 TSL 3 BASIC14.47□□□□□ -0.09
SHKBP1Q8TBC3 MIR1301-201ENST00000408518 82 ntBASIC14.47□□□□□ -0.09
SHKBP1Q8TBC3 AC069208.1-205ENST00000456299 576 ntTSL 4 BASIC14.47□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 52.9 ms