Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 AC093797.1-201ENST00000411847 1789 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
RSPO4Q2I0M5 RN7SL832P-201ENST00000607781 1756 ntBASIC13.25□□□□□ -0.29
RSPO4Q2I0M5 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC13.25□□□□□ -0.29
RSPO4Q2I0M5 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC13.25□□□□□ -0.29
RSPO4Q2I0M5 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC13.24□□□□□ -0.29
RSPO4Q2I0M5 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC13.24□□□□□ -0.29
RSPO4Q2I0M5 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC13.24□□□□□ -0.29
RSPO4Q2I0M5 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
RSPO4Q2I0M5 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
RSPO4Q2I0M5 LINC01230-201ENST00000625222 3017 ntBASIC13.24□□□□□ -0.29
RSPO4Q2I0M5 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
RSPO4Q2I0M5 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
RSPO4Q2I0M5 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
RSPO4Q2I0M5 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
RSPO4Q2I0M5 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC13.24□□□□□ -0.29
RSPO4Q2I0M5 UCKL1-AS1-201ENST00000623569 3602 ntBASIC13.24□□□□□ -0.29
RSPO4Q2I0M5 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC13.24□□□□□ -0.29
RSPO4Q2I0M5 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
RSPO4Q2I0M5 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
RSPO4Q2I0M5 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
RSPO4Q2I0M5 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
RSPO4Q2I0M5 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
RSPO4Q2I0M5 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC13.24□□□□□ -0.29
RSPO4Q2I0M5 SERPINA4-203ENST00000557004 2012 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
RSPO4Q2I0M5 FCRL6-201ENST00000321935 1997 ntAPPRIS ALT2 TSL 2 BASIC13.24□□□□□ -0.29
RSPO4Q2I0M5 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
RSPO4Q2I0M5 TPT1-201ENST00000309246 1008 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
RSPO4Q2I0M5 RNF7-202ENST00000393000 805 ntTSL 2 BASIC13.24□□□□□ -0.29
RSPO4Q2I0M5 AC103592.1-201ENST00000394513 664 ntBASIC13.24□□□□□ -0.29
RSPO4Q2I0M5 SDCBP2P1-201ENST00000416115 614 ntBASIC13.24□□□□□ -0.29
RSPO4Q2I0M5 PLA2G1B-202ENST00000423423 423 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
RSPO4Q2I0M5 AKR1C6P-201ENST00000432950 983 ntBASIC13.24□□□□□ -0.29
RSPO4Q2I0M5 AC005009.2-201ENST00000452471 687 ntTSL 3 BASIC13.24□□□□□ -0.29
RSPO4Q2I0M5 IGKV3-11-201ENST00000483158 392 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
RSPO4Q2I0M5 CD81-209ENST00000492627 886 ntTSL 3 BASIC13.24□□□□□ -0.29
RSPO4Q2I0M5 AC105424.1-201ENST00000514583 209 ntBASIC13.24□□□□□ -0.29
RSPO4Q2I0M5 FAR1-IT1-201ENST00000525233 368 ntTSL 3 BASIC13.24□□□□□ -0.29
RSPO4Q2I0M5 AC004923.4-201ENST00000532296 739 ntTSL 3 BASIC13.24□□□□□ -0.29
RSPO4Q2I0M5 ZFYVE1-206ENST00000555072 1225 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
RSPO4Q2I0M5 AC109597.2-201ENST00000569407 927 ntTSL 3 BASIC13.24□□□□□ -0.29
RSPO4Q2I0M5 AC008982.1-201ENST00000594769 963 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
RSPO4Q2I0M5 AC011479.2-201ENST00000598146 432 ntTSL 3 BASIC13.24□□□□□ -0.29
RSPO4Q2I0M5 AC008894.2-202ENST00000599676 1027 ntTSL 3 BASIC13.24□□□□□ -0.29
RSPO4Q2I0M5 AL356740.1-201ENST00000602192 1297 ntBASIC13.24□□□□□ -0.29
RSPO4Q2I0M5 FXYD4-204ENST00000616495 778 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
RSPO4Q2I0M5 IL4R-219ENST00000628578 201 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
RSPO4Q2I0M5 PAX6-247ENST00000638965 979 ntTSL 5 BASIC13.24□□□□□ -0.29
RSPO4Q2I0M5 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
RSPO4Q2I0M5 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
RSPO4Q2I0M5 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
RSPO4Q2I0M5 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
RSPO4Q2I0M5 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
RSPO4Q2I0M5 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
RSPO4Q2I0M5 PES1P2-201ENST00000449745 1735 ntBASIC13.24□□□□□ -0.29
RSPO4Q2I0M5 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
RSPO4Q2I0M5 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
RSPO4Q2I0M5 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
RSPO4Q2I0M5 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC13.23□□□□□ -0.29
RSPO4Q2I0M5 GMPR2-205ENST00000456667 1484 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
RSPO4Q2I0M5 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
RSPO4Q2I0M5 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
RSPO4Q2I0M5 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC13.23□□□□□ -0.29
RSPO4Q2I0M5 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC13.23□□□□□ -0.29
RSPO4Q2I0M5 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
RSPO4Q2I0M5 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC13.23□□□□□ -0.29
RSPO4Q2I0M5 DUT-208ENST00000559540 1441 ntTSL 2 BASIC13.23□□□□□ -0.29
RSPO4Q2I0M5 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
RSPO4Q2I0M5 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
RSPO4Q2I0M5 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
RSPO4Q2I0M5 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
RSPO4Q2I0M5 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC13.23□□□□□ -0.29
RSPO4Q2I0M5 DEGS1-202ENST00000391877 1345 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
RSPO4Q2I0M5 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
RSPO4Q2I0M5 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
RSPO4Q2I0M5 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
RSPO4Q2I0M5 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
RSPO4Q2I0M5 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
RSPO4Q2I0M5 OR6M1-201ENST00000309154 1053 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
RSPO4Q2I0M5 MED27-202ENST00000357028 1281 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
RSPO4Q2I0M5 MT-ND6-201ENST00000361681 525 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
RSPO4Q2I0M5 RBP4-203ENST00000371469 814 ntTSL 5 BASIC13.23□□□□□ -0.29
RSPO4Q2I0M5 AC105443.1-201ENST00000433754 712 ntBASIC13.23□□□□□ -0.29
RSPO4Q2I0M5 IDI2-AS1-204ENST00000437374 896 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
RSPO4Q2I0M5 AC004771.1-201ENST00000438266 583 ntTSL 2 BASIC13.23□□□□□ -0.29
RSPO4Q2I0M5 SGO1-AS1-201ENST00000441442 499 ntTSL 4 BASIC13.23□□□□□ -0.29
RSPO4Q2I0M5 HTATIP2-203ENST00000443524 967 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
RSPO4Q2I0M5 AC007690.1-201ENST00000451924 468 ntBASIC13.23□□□□□ -0.29
RSPO4Q2I0M5 AL359915.1-201ENST00000457719 898 ntTSL 2 BASIC13.23□□□□□ -0.29
RSPO4Q2I0M5 RN7SL479P-201ENST00000472003 300 ntBASIC13.23□□□□□ -0.29
RSPO4Q2I0M5 CLNK-203ENST00000507719 1143 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
RSPO4Q2I0M5 AC090617.4-201ENST00000572404 422 ntTSL 3 BASIC13.23□□□□□ -0.29
RSPO4Q2I0M5 AC104521.1-201ENST00000598582 279 ntTSL 5 BASIC13.23□□□□□ -0.29
RSPO4Q2I0M5 AC008982.2-201ENST00000600473 493 ntTSL 5 BASIC13.23□□□□□ -0.29
RSPO4Q2I0M5 AC136475.1-203ENST00000602756 1034 ntTSL 3 BASIC13.23□□□□□ -0.29
RSPO4Q2I0M5 AL645940.1-201ENST00000606432 594 ntTSL 2 BASIC13.23□□□□□ -0.29
RSPO4Q2I0M5 AC104506.1-201ENST00000609247 429 ntBASIC13.23□□□□□ -0.29
RSPO4Q2I0M5 HIST1H3E-201ENST00000614911 462 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
RSPO4Q2I0M5 AC137723.2-201ENST00000623540 398 ntBASIC13.23□□□□□ -0.29
RSPO4Q2I0M5 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
RSPO4Q2I0M5 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms