Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 AC011287.1-201ENST00000639998 1349 ntTSL 5 BASIC12.74□□□□□ -0.37
CLDN20P56880 STK25-235ENST00000543554 2556 ntTSL 2 BASIC12.74□□□□□ -0.37
CLDN20P56880 FMR1NB-201ENST00000370467 1021 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CLDN20P56880 SKA1-202ENST00000398452 979 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CLDN20P56880 AC006987.1-201ENST00000413610 527 ntBASIC12.74□□□□□ -0.37
CLDN20P56880 LINC01006-202ENST00000418309 640 ntTSL 3 BASIC12.74□□□□□ -0.37
CLDN20P56880 CSHL1-205ENST00000438387 566 ntTSL 5 BASIC12.74□□□□□ -0.37
CLDN20P56880 LINC02046-201ENST00000469812 378 ntTSL 3 BASIC12.74□□□□□ -0.37
CLDN20P56880 LINC01598-205ENST00000508763 719 ntTSL 5 BASIC12.74□□□□□ -0.37
CLDN20P56880 AC025154.2-201ENST00000550530 445 ntTSL 3 BASIC12.74□□□□□ -0.37
CLDN20P56880 PRKXP1-201ENST00000561423 1122 ntBASIC12.74□□□□□ -0.37
CLDN20P56880 AC133919.1-201ENST00000562203 416 ntTSL 3 BASIC12.74□□□□□ -0.37
CLDN20P56880 CMC2-204ENST00000562713 573 ntTSL 3 BASIC12.74□□□□□ -0.37
CLDN20P56880 CMC2-209ENST00000565108 399 ntTSL 2 BASIC12.74□□□□□ -0.37
CLDN20P56880 LINC01229-204ENST00000568751 720 ntTSL 3 BASIC12.74□□□□□ -0.37
CLDN20P56880 AL031282.1-201ENST00000577672 409 ntTSL 3 BASIC12.74□□□□□ -0.37
CLDN20P56880 CEP95-212ENST00000581056 903 ntAPPRIS ALT2 TSL 2 BASIC12.74□□□□□ -0.37
CLDN20P56880 AC016629.1-201ENST00000596579 586 ntBASIC12.74□□□□□ -0.37
CLDN20P56880 AL021707.6-201ENST00000609212 491 ntBASIC12.74□□□□□ -0.37
CLDN20P56880 KRTAP10-4-203ENST00000622352 1244 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
CLDN20P56880 RNF41-202ENST00000394013 2452 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
CLDN20P56880 TP73-211ENST00000604074 4806 ntTSL 5 BASIC12.74□□□□□ -0.37
CLDN20P56880 AC125807.2-201ENST00000513358 3514 ntBASIC12.74□□□□□ -0.37
CLDN20P56880 PSMC1-201ENST00000261303 4448 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CLDN20P56880 LCOR-203ENST00000371097 4852 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
CLDN20P56880 GUCY1B2-205ENST00000532104 1912 ntTSL 2 BASIC12.74□□□□□ -0.37
CLDN20P56880 ZBTB49-201ENST00000337872 2889 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CLDN20P56880 DNAJB13-201ENST00000339764 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CLDN20P56880 ING4-201ENST00000341550 1709 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
CLDN20P56880 PDE4C-204ENST00000539010 1699 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
CLDN20P56880 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CLDN20P56880 AC105345.1-202ENST00000382488 3204 ntTSL 2 BASIC12.73□□□□□ -0.37
CLDN20P56880 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
CLDN20P56880 CHIT1-201ENST00000255427 1598 ntTSL 2 BASIC12.73□□□□□ -0.37
CLDN20P56880 USP19-208ENST00000453664 4719 ntAPPRIS ALT2 TSL 2 BASIC12.73□□□□□ -0.37
CLDN20P56880 WDSUB1-201ENST00000358147 1535 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
CLDN20P56880 RAD23A-209ENST00000592268 1526 ntTSL 5 BASIC12.73□□□□□ -0.37
CLDN20P56880 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CLDN20P56880 HNF1B-204ENST00000617811 2977 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CLDN20P56880 PHACTR2-202ENST00000367582 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
CLDN20P56880 TSC22D3-204ENST00000372384 2199 ntTSL 2 BASIC12.73□□□□□ -0.37
CLDN20P56880 KAZN-205ENST00000400798 3643 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
CLDN20P56880 RGS3-205ENST00000374134 2862 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
CLDN20P56880 C14orf39-201ENST00000321731 2813 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CLDN20P56880 USP39-207ENST00000450066 2086 ntTSL 2 BASIC12.73□□□□□ -0.37
CLDN20P56880 PCDHA11-202ENST00000616325 3418 ntAPPRIS ALT2 BASIC12.73□□□□□ -0.37
CLDN20P56880 SERPING1-201ENST00000278407 2002 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
CLDN20P56880 BAIAP3-201ENST00000324385 4678 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
CLDN20P56880 CYTH2-203ENST00000427476 4606 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CLDN20P56880 FAM168B-202ENST00000409185 5285 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CLDN20P56880 COASY-211ENST00000590958 1976 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
CLDN20P56880 SFRP1-202ENST00000379845 3873 ntTSL 2 BASIC12.73□□□□□ -0.37
CLDN20P56880 AXL-203ENST00000593513 2557 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
CLDN20P56880 SPG11-210ENST00000558319 6426 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
CLDN20P56880 RPAIN-201ENST00000327154 815 ntTSL 2 BASIC12.73□□□□□ -0.37
CLDN20P56880 DEFB123-201ENST00000376309 467 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CLDN20P56880 UFM1-202ENST00000379649 846 ntTSL 4 BASIC12.73□□□□□ -0.37
CLDN20P56880 CD8A-204ENST00000409781 597 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
CLDN20P56880 AL592076.1-201ENST00000424448 303 ntBASIC12.73□□□□□ -0.37
CLDN20P56880 DGUOK-AS1-202ENST00000439192 563 ntTSL 2 BASIC12.73□□□□□ -0.37
CLDN20P56880 FTH1P22-201ENST00000456305 520 ntBASIC12.73□□□□□ -0.37
CLDN20P56880 LINC00887-204ENST00000456816 796 ntTSL 3 BASIC12.73□□□□□ -0.37
CLDN20P56880 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC12.73□□□□□ -0.37
CLDN20P56880 CHCHD2P2-201ENST00000503744 321 ntBASIC12.73□□□□□ -0.37
CLDN20P56880 WSPAR-201ENST00000513561 683 ntTSL 3 BASIC12.73□□□□□ -0.37
CLDN20P56880 AC124301.1-201ENST00000524885 602 ntTSL 3 BASIC12.73□□□□□ -0.37
CLDN20P56880 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
CLDN20P56880 AHNAK-205ENST00000530124 701 ntAPPRIS ALT2 TSL 3 BASIC12.73□□□□□ -0.37
CLDN20P56880 LGALS3-204ENST00000554715 916 ntTSL 3 BASIC12.73□□□□□ -0.37
CLDN20P56880 MIR4522-201ENST00000584932 87 ntBASIC12.73□□□□□ -0.37
CLDN20P56880 C19orf25-205ENST00000588427 853 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
CLDN20P56880 TMEM205-210ENST00000588560 840 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
CLDN20P56880 ANXA8L1-206ENST00000619162 1109 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CLDN20P56880 AC009560.1-201ENST00000620208 434 ntBASIC12.73□□□□□ -0.37
CLDN20P56880 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CLDN20P56880 ZNF829-201ENST00000391711 1805 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
CLDN20P56880 AC125611.4-201ENST00000553259 4166 ntTSL 2 BASIC12.73□□□□□ -0.37
CLDN20P56880 PPM1M-203ENST00000409502 1790 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
CLDN20P56880 DAB2IP-202ENST00000309989 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
CLDN20P56880 AL445209.1-201ENST00000607269 3491 ntBASIC12.73□□□□□ -0.37
CLDN20P56880 KLHL32-206ENST00000544166 2864 ntTSL 2 BASIC12.73□□□□□ -0.37
CLDN20P56880 LHFPL2-201ENST00000380345 5043 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
CLDN20P56880 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC12.73□□□□□ -0.37
CLDN20P56880 KRT33B-201ENST00000251646 1607 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CLDN20P56880 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
CLDN20P56880 ARPC1A-201ENST00000262942 1565 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CLDN20P56880 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC12.73□□□□□ -0.37
CLDN20P56880 CHRNA1-204ENST00000409323 1585 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
CLDN20P56880 ROPN1B-202ENST00000504401 2050 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
CLDN20P56880 NAP1L2-201ENST00000373517 2550 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
CLDN20P56880 HLA-DQB1-202ENST00000399079 1501 ntBASIC12.72□□□□□ -0.37
CLDN20P56880 KIF12-201ENST00000374118 2001 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
CLDN20P56880 AP2M1-207ENST00000439647 1950 ntAPPRIS ALT1 TSL 2 BASIC12.72□□□□□ -0.37
CLDN20P56880 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC12.72□□□□□ -0.37
CLDN20P56880 Z97192.2-201ENST00000393264 2379 ntTSL 2 BASIC12.72□□□□□ -0.37
CLDN20P56880 AL513327.1-206ENST00000587696 1432 ntTSL 5 BASIC12.72□□□□□ -0.37
CLDN20P56880 RS1-201ENST00000379984 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CLDN20P56880 SERTAD2-201ENST00000313349 5549 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CLDN20P56880 SNHG1-213ENST00000540725 1374 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
CLDN20P56880 USH1G-202ENST00000614341 3558 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms