Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 RPSAP70-201ENST00000504462 864 ntBASIC14.43□□□□□ -0.1
MTHFRP42898 C9orf135-205ENST00000527647 748 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
MTHFRP42898 BMF-206ENST00000558774 671 ntTSL 3 BASIC14.43□□□□□ -0.1
MTHFRP42898 MKRN3-202ENST00000564592 629 ntTSL 3 BASIC14.43□□□□□ -0.1
MTHFRP42898 AC090617.4-201ENST00000572404 422 ntTSL 3 BASIC14.43□□□□□ -0.1
MTHFRP42898 AC008982.2-201ENST00000600473 493 ntTSL 5 BASIC14.43□□□□□ -0.1
MTHFRP42898 PRMT1P1-201ENST00000604252 1009 ntBASIC14.43□□□□□ -0.1
MTHFRP42898 AC245100.4-201ENST00000634549 1082 ntTSL 5 BASIC14.43□□□□□ -0.1
MTHFRP42898 MEP1AP1-201ENST00000636082 1097 ntBASIC14.43□□□□□ -0.1
MTHFRP42898 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
MTHFRP42898 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
MTHFRP42898 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
MTHFRP42898 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
MTHFRP42898 AC068760.1-201ENST00000493579 1953 ntBASIC14.43□□□□□ -0.1
MTHFRP42898 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
MTHFRP42898 RPAIN-202ENST00000381208 1394 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
MTHFRP42898 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC14.43□□□□□ -0.1
MTHFRP42898 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
MTHFRP42898 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
MTHFRP42898 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
MTHFRP42898 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
MTHFRP42898 LINC00887-202ENST00000414120 2880 ntTSL 3 BASIC14.43□□□□□ -0.1
MTHFRP42898 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
MTHFRP42898 MSMO1-201ENST00000261507 2269 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
MTHFRP42898 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
MTHFRP42898 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
MTHFRP42898 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
MTHFRP42898 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC14.42□□□□□ -0.1
MTHFRP42898 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC14.42□□□□□ -0.1
MTHFRP42898 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
MTHFRP42898 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
MTHFRP42898 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC14.42□□□□□ -0.1
MTHFRP42898 CCDC86-201ENST00000227520 1893 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
MTHFRP42898 CPPED1-201ENST00000261660 1898 ntTSL 2 BASIC14.42□□□□□ -0.1
MTHFRP42898 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC14.42□□□□□ -0.1
MTHFRP42898 F10-201ENST00000375551 1509 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
MTHFRP42898 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
MTHFRP42898 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
MTHFRP42898 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC14.42□□□□□ -0.1
MTHFRP42898 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
MTHFRP42898 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
MTHFRP42898 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
MTHFRP42898 MRPL18-201ENST00000367034 978 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
MTHFRP42898 TOMM5-203ENST00000401811 789 ntTSL 2 BASIC14.42□□□□□ -0.1
MTHFRP42898 AL773545.2-201ENST00000442149 472 ntBASIC14.42□□□□□ -0.1
MTHFRP42898 AL365500.1-201ENST00000442783 868 ntTSL 3 BASIC14.42□□□□□ -0.1
MTHFRP42898 AC079250.1-201ENST00000456046 531 ntBASIC14.42□□□□□ -0.1
MTHFRP42898 TCEAL4-206ENST00000468024 1135 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
MTHFRP42898 AC137579.2-201ENST00000517714 551 ntTSL 4 BASIC14.42□□□□□ -0.1
MTHFRP42898 VEGFA-219ENST00000518824 606 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
MTHFRP42898 AL139316.1-201ENST00000555643 568 ntTSL 3 BASIC14.42□□□□□ -0.1
MTHFRP42898 AC005786.2-201ENST00000592368 369 ntTSL 3 BASIC14.42□□□□□ -0.1
MTHFRP42898 STAG3L1-204ENST00000619870 1192 ntTSL 2 BASIC14.42□□□□□ -0.1
MTHFRP42898 AC020904.3-201ENST00000624199 442 ntBASIC14.42□□□□□ -0.1
MTHFRP42898 AC110057.1-201ENST00000636031 898 ntBASIC14.42□□□□□ -0.1
MTHFRP42898 PAX6-237ENST00000638696 1203 ntTSL 5 BASIC14.42□□□□□ -0.1
MTHFRP42898 ABR-205ENST00000544583 5595 ntTSL 2 BASIC14.42□□□□□ -0.1
MTHFRP42898 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
MTHFRP42898 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC14.42□□□□□ -0.1
MTHFRP42898 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
MTHFRP42898 ZNF460-202ENST00000537645 2037 ntTSL 2 BASIC14.42□□□□□ -0.1
MTHFRP42898 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
MTHFRP42898 FAM226B-201ENST00000602508 1490 ntBASIC14.42□□□□□ -0.1
MTHFRP42898 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
MTHFRP42898 SLC6A2-205ENST00000566163 1759 ntTSL 5 BASIC14.42□□□□□ -0.1
MTHFRP42898 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
MTHFRP42898 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
MTHFRP42898 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC14.41□□□□□ -0.1
MTHFRP42898 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
MTHFRP42898 ART3-201ENST00000341029 1517 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
MTHFRP42898 PCGF2-203ENST00000616129 1534 ntTSL 5 BASIC14.41□□□□□ -0.1
MTHFRP42898 IZUMO1-201ENST00000332955 1621 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
MTHFRP42898 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
MTHFRP42898 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
MTHFRP42898 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
MTHFRP42898 LGALS12-204ENST00000415491 1816 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
MTHFRP42898 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
MTHFRP42898 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
MTHFRP42898 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
MTHFRP42898 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
MTHFRP42898 AC152010.1-201ENST00000415779 2006 ntBASIC14.41□□□□□ -0.1
MTHFRP42898 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
MTHFRP42898 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
MTHFRP42898 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
MTHFRP42898 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
MTHFRP42898 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC14.41□□□□□ -0.1
MTHFRP42898 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
MTHFRP42898 MT1E-202ENST00000330439 729 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
MTHFRP42898 KCNE1-202ENST00000399284 666 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
MTHFRP42898 GGTLC4P-201ENST00000402176 664 ntBASIC14.41□□□□□ -0.1
MTHFRP42898 OR7E155P-201ENST00000412208 1014 ntBASIC14.41□□□□□ -0.1
MTHFRP42898 SNHG14-201ENST00000414175 610 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
MTHFRP42898 AC041040.1-201ENST00000425197 460 ntBASIC14.41□□□□□ -0.1
MTHFRP42898 AL355482.2-201ENST00000428646 1145 ntTSL 2 BASIC14.41□□□□□ -0.1
MTHFRP42898 TRAPPC4-202ENST00000434101 794 ntTSL 2 BASIC14.41□□□□□ -0.1
MTHFRP42898 ZNF877P-201ENST00000437614 612 ntBASIC14.41□□□□□ -0.1
MTHFRP42898 AC002127.2-201ENST00000444032 792 ntTSL 3 BASIC14.41□□□□□ -0.1
MTHFRP42898 BX322557.2-201ENST00000445242 379 ntTSL 3 BASIC14.41□□□□□ -0.1
MTHFRP42898 AL136084.1-201ENST00000449172 318 ntBASIC14.41□□□□□ -0.1
MTHFRP42898 AC103923.1-201ENST00000453229 1228 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms