Protein–RNA interactions for Protein: P15056

BRAF, Serine/threonine-protein kinase B-raf, humanhuman

Predictions only

Length 766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRAFP15056 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
BRAFP15056 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC14.3□□□□□ -0.12
BRAFP15056 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC14.3□□□□□ -0.12
BRAFP15056 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC14.3□□□□□ -0.12
BRAFP15056 MARK2P5-201ENST00000507649 634 ntBASIC14.3□□□□□ -0.12
BRAFP15056 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC14.3□□□□□ -0.12
BRAFP15056 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC14.3□□□□□ -0.12
BRAFP15056 PAM16-211ENST00000575848 518 ntTSL 3 BASIC14.3□□□□□ -0.12
BRAFP15056 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
BRAFP15056 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
BRAFP15056 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC14.3□□□□□ -0.12
BRAFP15056 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC14.3□□□□□ -0.12
BRAFP15056 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
BRAFP15056 ETS2-201ENST00000360214 3936 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
BRAFP15056 TUBBP5-203ENST00000508529 1334 ntBASIC14.3□□□□□ -0.12
BRAFP15056 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC14.3□□□□□ -0.12
BRAFP15056 NHEJ1-201ENST00000356853 2094 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
BRAFP15056 KLC4-203ENST00000394056 2770 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
BRAFP15056 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
BRAFP15056 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC14.3□□□□□ -0.12
BRAFP15056 JOSD1-201ENST00000216039 3648 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
BRAFP15056 FUT6-205ENST00000527106 2211 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
BRAFP15056 WASF3-202ENST00000361042 4823 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
BRAFP15056 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
BRAFP15056 MAGED4-201ENST00000375626 2495 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
BRAFP15056 NAPEPLD-201ENST00000341533 4972 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
BRAFP15056 ABCA17P-202ENST00000469908 4188 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
BRAFP15056 SUCO-202ENST00000367723 5916 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
BRAFP15056 DYNC1I2-203ENST00000409197 2572 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
BRAFP15056 DYNC1I2-206ENST00000409773 2583 ntTSL 2 BASIC14.29□□□□□ -0.12
BRAFP15056 SAMD14-202ENST00000330175 4425 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
BRAFP15056 SLC45A2-201ENST00000296589 1772 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
BRAFP15056 GTF2F1-201ENST00000394456 2731 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
BRAFP15056 FP325330.2-201ENST00000624219 5630 ntBASIC14.29□□□□□ -0.12
BRAFP15056 EMC10-201ENST00000334976 9446 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
BRAFP15056 SPTBN2-210ENST00000611817 2890 ntTSL 2 BASIC14.29□□□□□ -0.12
BRAFP15056 RAB42-201ENST00000373826 1950 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
BRAFP15056 TTC39B-201ENST00000297615 3053 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
BRAFP15056 SLC6A9-205ENST00000372310 3130 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
BRAFP15056 ELN-211ENST00000414324 3139 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
BRAFP15056 CRY2-212ENST00000616623 4204 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
BRAFP15056 WDR81-205ENST00000437219 3184 ntTSL 2 BASIC14.29□□□□□ -0.12
BRAFP15056 CYP26B1-205ENST00000546307 4331 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
BRAFP15056 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC14.29□□□□□ -0.12
BRAFP15056 USP39-220ENST00000613444 2161 ntTSL 2 BASIC14.29□□□□□ -0.12
BRAFP15056 ALPK3-201ENST00000258888 10917 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
BRAFP15056 ACKR3-201ENST00000272928 2203 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
BRAFP15056 SLC37A4-202ENST00000357590 2356 ntTSL 5 BASIC14.29□□□□□ -0.12
BRAFP15056 OR2V1-204ENST00000641551 2423 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
BRAFP15056 RRBP1-206ENST00000455029 2485 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
BRAFP15056 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
BRAFP15056 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
BRAFP15056 NFYC-202ENST00000372651 1202 ntAPPRIS P3 TSL 5 BASIC14.29□□□□□ -0.12
BRAFP15056 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC14.29□□□□□ -0.12
BRAFP15056 AC006122.1-201ENST00000493323 440 ntBASIC14.29□□□□□ -0.12
BRAFP15056 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC14.29□□□□□ -0.12
BRAFP15056 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC14.29□□□□□ -0.12
BRAFP15056 SDHD-202ENST00000525291 790 ntTSL 3 BASIC14.29□□□□□ -0.12
BRAFP15056 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC14.29□□□□□ -0.12
BRAFP15056 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC14.29□□□□□ -0.12
BRAFP15056 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC14.29□□□□□ -0.12
BRAFP15056 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC14.29□□□□□ -0.12
BRAFP15056 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
BRAFP15056 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC14.29□□□□□ -0.12
BRAFP15056 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC14.29□□□□□ -0.12
BRAFP15056 ARHGEF17-201ENST00000263674 7853 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
BRAFP15056 BIRC5-202ENST00000350051 2630 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
BRAFP15056 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
BRAFP15056 KIAA1191-202ENST00000393725 2700 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
BRAFP15056 PCGF2-203ENST00000616129 1534 ntTSL 5 BASIC14.29□□□□□ -0.12
BRAFP15056 ADAM8-201ENST00000415217 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
BRAFP15056 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
BRAFP15056 DUOX2-205ENST00000603300 6345 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
BRAFP15056 NIPSNAP3A-201ENST00000374767 1633 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
BRAFP15056 POLD1-205ENST00000595904 3402 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
BRAFP15056 SELENOV-202ENST00000423711 1701 ntTSL 5 BASIC14.29□□□□□ -0.12
BRAFP15056 HEXA-206ENST00000566304 1795 ntTSL 2 BASIC14.29□□□□□ -0.12
BRAFP15056 KIF17-202ENST00000375044 3572 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
BRAFP15056 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
BRAFP15056 GLP2R-204ENST00000574745 1882 ntTSL 2 BASIC14.29□□□□□ -0.12
BRAFP15056 CDK5RAP1-203ENST00000357886 2164 ntTSL 5 BASIC14.29□□□□□ -0.12
BRAFP15056 CAPN5-201ENST00000278559 4397 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
BRAFP15056 IGFN1-201ENST00000295591 4439 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
BRAFP15056 NFATC1-203ENST00000329101 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
BRAFP15056 UBE2W-201ENST00000419880 2315 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
BRAFP15056 TMEM164-203ENST00000372072 4975 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
BRAFP15056 ZFYVE27-205ENST00000370613 2669 ntTSL 2 BASIC14.28□□□□□ -0.12
BRAFP15056 ATP6V0A1-206ENST00000585525 2679 ntTSL 2 BASIC14.28□□□□□ -0.12
BRAFP15056 SNCAIP-222ENST00000542191 2729 ntTSL 5 BASIC14.28□□□□□ -0.12
BRAFP15056 NEK4-201ENST00000233027 6057 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
BRAFP15056 DCAF6-201ENST00000312263 3186 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
BRAFP15056 PAX8-203ENST00000348715 3966 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
BRAFP15056 AP000347.1-201ENST00000417194 5004 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
BRAFP15056 IKZF1-204ENST00000349824 5757 ntTSL 5 BASIC14.28□□□□□ -0.12
BRAFP15056 EDEM3-202ENST00000367512 6678 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
BRAFP15056 SNED1-205ENST00000405547 7986 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
BRAFP15056 DYRK4-201ENST00000010132 1840 ntAPPRIS P2 TSL 5 BASIC14.28□□□□□ -0.12
BRAFP15056 DDX54-201ENST00000306014 4377 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
BRAFP15056 BCL2L1-201ENST00000307677 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
BRAFP15056 EXOC3-201ENST00000315013 2682 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 54.5 ms