Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 STK32B-201ENST00000282908 3582 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
VTNP04004 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
VTNP04004 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC15.04■□□□□ -0
VTNP04004 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC15.04■□□□□ -0
VTNP04004 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC15.04■□□□□ -0
VTNP04004 ZNF691-201ENST00000372502 1910 ntAPPRIS ALT2 TSL 2 BASIC15.04■□□□□ -0
VTNP04004 TCN2-202ENST00000405742 1936 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
VTNP04004 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
VTNP04004 PPP1R13L-201ENST00000360957 3104 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
VTNP04004 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC15.03■□□□□ -0
VTNP04004 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC15.03■□□□□ -0
VTNP04004 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC15.03■□□□□ -0
VTNP04004 AC239809.3-201ENST00000599640 4266 ntTSL 5 BASIC15.03■□□□□ -0
VTNP04004 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC15.03■□□□□ -0
VTNP04004 SETMAR-205ENST00000425863 1657 ntTSL 2 BASIC15.03■□□□□ -0
VTNP04004 CASP8-212ENST00000432109 1629 ntAPPRIS P4 TSL 5 BASIC15.03■□□□□ -0
VTNP04004 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC15.03■□□□□ -0
VTNP04004 CRACR2A-203ENST00000440314 2697 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
VTNP04004 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
VTNP04004 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC15.03■□□□□ -0
VTNP04004 LINC00511-213ENST00000581549 2265 ntTSL 2 BASIC15.03■□□□□ -0
VTNP04004 SMOC2-202ENST00000356284 3117 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
VTNP04004 TMEM78-201ENST00000323223 2175 ntAPPRIS P1 BASIC15.03■□□□□ -0
VTNP04004 CAMP-201ENST00000296435 745 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
VTNP04004 INO80C-202ENST00000334598 974 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
VTNP04004 C11orf49-203ENST00000378618 1166 ntTSL 5 BASIC15.03■□□□□ -0
VTNP04004 IQCF4-202ENST00000422896 745 ntTSL 2 BASIC15.03■□□□□ -0
VTNP04004 AL391832.2-203ENST00000423175 554 ntTSL 3 BASIC15.03■□□□□ -0
VTNP04004 LINC01523-201ENST00000425385 450 ntTSL 2 BASIC15.03■□□□□ -0
VTNP04004 IDS-203ENST00000428056 1213 ntTSL 2 BASIC15.03■□□□□ -0
VTNP04004 AL512288.1-201ENST00000448015 491 ntTSL 5 BASIC15.03■□□□□ -0
VTNP04004 HMGB3-204ENST00000448905 812 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
VTNP04004 CLDN25-201ENST00000453129 754 ntAPPRIS P1 BASIC15.03■□□□□ -0
VTNP04004 AC012213.1-201ENST00000517376 722 ntTSL 3 BASIC15.03■□□□□ -0
VTNP04004 SAA2-206ENST00000530400 323 ntTSL 3 BASIC15.03■□□□□ -0
VTNP04004 TMBIM4-208ENST00000542724 770 ntTSL 1 (best) BASIC15.03■□□□□ -0
VTNP04004 LINC01481-204ENST00000550216 494 ntTSL 2 BASIC15.03■□□□□ -0
VTNP04004 AC090001.1-201ENST00000553194 467 ntTSL 3 BASIC15.03■□□□□ -0
VTNP04004 AC023968.2-201ENST00000560593 1049 ntBASIC15.03■□□□□ -0
VTNP04004 Metazoa_SRP.128-201ENST00000620543 314 ntBASIC15.03■□□□□ -0
VTNP04004 CHRND-206ENST00000543200 2918 ntTSL 2 BASIC15.03■□□□□ -0
VTNP04004 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
VTNP04004 SNCAIP-222ENST00000542191 2729 ntTSL 5 BASIC15.03■□□□□ -0
VTNP04004 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
VTNP04004 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
VTNP04004 RDH12-203ENST00000551171 1879 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
VTNP04004 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
VTNP04004 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC15.03■□□□□ -0
VTNP04004 SPDYA-202ENST00000379579 1759 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
VTNP04004 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC15.03■□□□□ -0
VTNP04004 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
VTNP04004 NAALADL1-201ENST00000340252 2376 ntTSL 5 BASIC15.03■□□□□ -0
VTNP04004 ZFYVE19-215ENST00000570108 1669 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
VTNP04004 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
VTNP04004 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC15.03■□□□□ -0
VTNP04004 PLD2-201ENST00000263088 3503 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
VTNP04004 ERG-211ENST00000453032 1595 ntTSL 2 BASIC15.02■□□□□ -0
VTNP04004 AC023794.5-201ENST00000564380 2157 ntBASIC15.02■□□□□ -0
VTNP04004 AC024075.2-201ENST00000598112 1473 ntBASIC15.02■□□□□ -0
VTNP04004 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC15.02■□□□□ -0
VTNP04004 SYBU-217ENST00000528331 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
VTNP04004 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
VTNP04004 C12orf76-201ENST00000309050 1964 ntTSL 2 BASIC15.02■□□□□ -0
VTNP04004 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC15.02■□□□□ -0
VTNP04004 B3GNTL1-201ENST00000320865 1383 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
VTNP04004 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
VTNP04004 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02■□□□□ -0
VTNP04004 FBXO34-201ENST00000313833 3464 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
VTNP04004 MRPL33-201ENST00000296102 518 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
VTNP04004 MRPL33-202ENST00000379666 404 ntTSL 1 (best) BASIC15.02■□□□□ -0
VTNP04004 AC078785.1-204ENST00000460707 764 ntTSL 3 BASIC15.02■□□□□ -0
VTNP04004 PPOX-204ENST00000462866 473 ntTSL 5 BASIC15.02■□□□□ -0
VTNP04004 ALG1L7P-201ENST00000502317 768 ntBASIC15.02■□□□□ -0
VTNP04004 AC107464.2-201ENST00000502923 569 ntTSL 2 BASIC15.02■□□□□ -0
VTNP04004 AP003031.2-205ENST00000531263 683 ntTSL 2 BASIC15.02■□□□□ -0
VTNP04004 CMTM1-219ENST00000533953 934 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
VTNP04004 AC068831.5-201ENST00000557387 328 ntBASIC15.02■□□□□ -0
VTNP04004 AC009119.2-201ENST00000561562 723 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
VTNP04004 FAM187B2P-201ENST00000577135 713 ntBASIC15.02■□□□□ -0
VTNP04004 AC018761.2-201ENST00000585496 296 ntTSL 3 BASIC15.02■□□□□ -0
VTNP04004 RPS5-204ENST00000598098 536 ntTSL 2 BASIC15.02■□□□□ -0
VTNP04004 URAHP-205ENST00000610227 398 ntBASIC15.02■□□□□ -0
VTNP04004 Metazoa_SRP.141-201ENST00000615072 282 ntBASIC15.02■□□□□ -0
VTNP04004 MECP2-213ENST00000622433 1071 ntTSL 5 BASIC15.02■□□□□ -0
VTNP04004 SERPINH1-205ENST00000525876 2283 ntTSL 2 BASIC15.02□□□□□ -0.01
VTNP04004 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
VTNP04004 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC15.02□□□□□ -0.01
VTNP04004 ALPL-206ENST00000539907 2241 ntTSL 2 BASIC15.02□□□□□ -0.01
VTNP04004 ZNF263-202ENST00000538765 1721 ntTSL 2 BASIC15.02□□□□□ -0.01
VTNP04004 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
VTNP04004 MKRN2-203ENST00000448482 1679 ntTSL 5 BASIC15.02□□□□□ -0.01
VTNP04004 DLX1-203ENST00000361725 2640 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
VTNP04004 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
VTNP04004 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
VTNP04004 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
VTNP04004 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
VTNP04004 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
VTNP04004 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC15.02□□□□□ -0.01
VTNP04004 GDPD5-215ENST00000533805 2424 ntTSL 2 BASIC15.02□□□□□ -0.01
VTNP04004 KLKP1-203ENST00000600104 1532 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 55.8 ms