Protein–RNA interactions for Protein: Q92572

AP3S1, AP-3 complex subunit sigma-1, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1Q92572 COBLL1-202ENST00000375458 9367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
AP3S1Q92572 ERN2-201ENST00000256797 3549 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
AP3S1Q92572 TAOK2-201ENST00000279394 4246 ntAPPRIS ALT1 TSL 1 (best) BASIC12.22□□□□□ -0.45
AP3S1Q92572 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
AP3S1Q92572 HNRNPA1P48-201ENST00000562726 1377 ntBASIC12.22□□□□□ -0.45
AP3S1Q92572 LUZP1-201ENST00000302291 8898 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
AP3S1Q92572 GNB5-203ENST00000396335 2678 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
AP3S1Q92572 CU639417.6-202ENST00000624872 3241 ntTSL 5 BASIC12.22□□□□□ -0.45
AP3S1Q92572 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
AP3S1Q92572 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
AP3S1Q92572 HNRNPA1P2-207ENST00000432375 960 ntBASIC12.22□□□□□ -0.45
AP3S1Q92572 SKA2-202ENST00000437036 625 ntTSL 2 BASIC12.22□□□□□ -0.45
AP3S1Q92572 EIF4HP1-201ENST00000453115 687 ntBASIC12.22□□□□□ -0.45
AP3S1Q92572 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC12.22□□□□□ -0.45
AP3S1Q92572 KRT18P58-201ENST00000527480 1120 ntBASIC12.22□□□□□ -0.45
AP3S1Q92572 NEU3-203ENST00000529024 581 ntTSL 3 BASIC12.22□□□□□ -0.45
AP3S1Q92572 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC12.22□□□□□ -0.45
AP3S1Q92572 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC12.22□□□□□ -0.45
AP3S1Q92572 AGER-214ENST00000538695 487 ntTSL 2 BASIC12.22□□□□□ -0.45
AP3S1Q92572 ENPP7P5-201ENST00000541031 1031 ntBASIC12.22□□□□□ -0.45
AP3S1Q92572 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC12.22□□□□□ -0.45
AP3S1Q92572 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC12.22□□□□□ -0.45
AP3S1Q92572 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC12.22□□□□□ -0.45
AP3S1Q92572 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
AP3S1Q92572 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
AP3S1Q92572 AC015967.2-201ENST00000624092 234 ntBASIC12.22□□□□□ -0.45
AP3S1Q92572 AL161773.1-201ENST00000624845 863 ntBASIC12.22□□□□□ -0.45
AP3S1Q92572 AC006435.4-201ENST00000625037 234 ntBASIC12.22□□□□□ -0.45
AP3S1Q92572 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
AP3S1Q92572 AL356737.1-201ENST00000634391 234 ntBASIC12.22□□□□□ -0.45
AP3S1Q92572 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC12.22□□□□□ -0.45
AP3S1Q92572 TRAPPC2L-211ENST00000565504 3102 ntTSL 2 BASIC12.22□□□□□ -0.45
AP3S1Q92572 KIZ-208ENST00000616848 1875 ntAPPRIS ALT2 TSL 2 BASIC12.22□□□□□ -0.45
AP3S1Q92572 MSH5-204ENST00000375755 3094 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
AP3S1Q92572 HPSE2-201ENST00000370546 1849 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
AP3S1Q92572 COL8A1-202ENST00000273342 3029 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
AP3S1Q92572 LSS-201ENST00000356396 2995 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
AP3S1Q92572 SYBU-204ENST00000408908 2983 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
AP3S1Q92572 PRR3-201ENST00000376557 1797 ntTSL 2 BASIC12.22□□□□□ -0.45
AP3S1Q92572 COL12A1-202ENST00000345356 5886 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
AP3S1Q92572 PCDHAC1-201ENST00000253807 5299 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
AP3S1Q92572 DNMT1-202ENST00000359526 5206 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
AP3S1Q92572 TLK1-205ENST00000431350 5663 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
AP3S1Q92572 COL19A1-205ENST00000620364 6233 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
AP3S1Q92572 AL359510.2-201ENST00000624958 2249 ntBASIC12.22□□□□□ -0.45
AP3S1Q92572 HMOX2-201ENST00000219700 1621 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
AP3S1Q92572 CNBP-203ENST00000446936 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC12.22□□□□□ -0.45
AP3S1Q92572 CNBP-204ENST00000451728 1641 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
AP3S1Q92572 TNRC6C-201ENST00000301624 9632 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
AP3S1Q92572 PLOD2-201ENST00000282903 3732 ntAPPRIS P4 TSL 1 (best) BASIC12.22□□□□□ -0.45
AP3S1Q92572 SLC35B3-201ENST00000379660 2137 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
AP3S1Q92572 DLGAP2-201ENST00000421627 3165 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
AP3S1Q92572 EBF1-201ENST00000313708 5250 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
AP3S1Q92572 TUBB2A-201ENST00000333628 1595 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
AP3S1Q92572 CSF3-204ENST00000394149 1583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
AP3S1Q92572 INSC-205ENST00000525218 1576 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
AP3S1Q92572 FAM227B-212ENST00000561064 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
AP3S1Q92572 PNMA3-203ENST00000619635 3627 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
AP3S1Q92572 FMNL1-202ENST00000331495 4101 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
AP3S1Q92572 ATG7-213ENST00000446450 2042 ntTSL 2 BASIC12.21□□□□□ -0.45
AP3S1Q92572 MBNL1-AS1-202ENST00000608395 6585 ntTSL 2 BASIC12.21□□□□□ -0.45
AP3S1Q92572 GAS7-219ENST00000585266 3535 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
AP3S1Q92572 FAM90A17P-201ENST00000533716 1957 ntBASIC12.21□□□□□ -0.45
AP3S1Q92572 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
AP3S1Q92572 AC138028.6-201ENST00000616106 1482 ntBASIC12.21□□□□□ -0.45
AP3S1Q92572 GGTA1P-202ENST00000481534 3429 ntTSL 2 BASIC12.21□□□□□ -0.45
AP3S1Q92572 STX16-NPEPL1-202ENST00000530122 3433 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
AP3S1Q92572 GRIPAP1-207ENST00000593475 2908 ntTSL 5 BASIC12.21□□□□□ -0.45
AP3S1Q92572 CIZ1-205ENST00000372948 2858 ntAPPRIS ALT2 TSL 2 BASIC12.21□□□□□ -0.45
AP3S1Q92572 RHOH-222ENST00000617441 1872 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.45
AP3S1Q92572 NEK11-209ENST00000510688 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
AP3S1Q92572 UBR7-201ENST00000013070 3694 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
AP3S1Q92572 PFKFB3-203ENST00000379775 4483 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
AP3S1Q92572 MIS12-202ENST00000573759 2204 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
AP3S1Q92572 ZFYVE19-202ENST00000336455 1784 ntTSL 2 BASIC12.21□□□□□ -0.45
AP3S1Q92572 CD59-201ENST00000351554 1775 ntAPPRIS P2 TSL 2 BASIC12.21□□□□□ -0.45
AP3S1Q92572 GDA-203ENST00000376986 1771 ntTSL 2 BASIC12.21□□□□□ -0.45
AP3S1Q92572 FAS-202ENST00000352159 1722 ntTSL 5 BASIC12.21□□□□□ -0.45
AP3S1Q92572 GBP1P1-201ENST00000394662 1740 ntBASIC12.21□□□□□ -0.45
AP3S1Q92572 SLC2A14-205ENST00000535295 1732 ntTSL 2 BASIC12.21□□□□□ -0.45
AP3S1Q92572 UNC93A-201ENST00000230256 2116 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
AP3S1Q92572 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
AP3S1Q92572 SH3BGRL3-202ENST00000319041 768 ntTSL 2 BASIC12.21□□□□□ -0.45
AP3S1Q92572 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
AP3S1Q92572 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.45
AP3S1Q92572 AC092580.3-201ENST00000430932 139 ntBASIC12.21□□□□□ -0.45
AP3S1Q92572 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC12.21□□□□□ -0.45
AP3S1Q92572 AC241585.1-201ENST00000433527 519 ntBASIC12.21□□□□□ -0.45
AP3S1Q92572 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC12.21□□□□□ -0.45
AP3S1Q92572 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC12.21□□□□□ -0.45
AP3S1Q92572 AC022137.2-201ENST00000503482 481 ntBASIC12.21□□□□□ -0.45
AP3S1Q92572 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC12.21□□□□□ -0.45
AP3S1Q92572 DOC2GP-202ENST00000514950 1163 ntBASIC12.21□□□□□ -0.45
AP3S1Q92572 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC12.21□□□□□ -0.45
AP3S1Q92572 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC12.21□□□□□ -0.45
AP3S1Q92572 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC12.21□□□□□ -0.45
AP3S1Q92572 AC009407.1-201ENST00000568958 598 ntBASIC12.21□□□□□ -0.45
AP3S1Q92572 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC12.21□□□□□ -0.45
AP3S1Q92572 METTL23-205ENST00000588302 925 ntTSL 5 BASIC12.21□□□□□ -0.45
AP3S1Q92572 ATF5-205ENST00000600336 682 ntTSL 2 BASIC12.21□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 107.2 ms