Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 C7orf57-201ENST00000348904 2125 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
SLC1A1P43005 PIGG-217ENST00000509768 3121 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
SLC1A1P43005 MRPS10-201ENST00000053468 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SLC1A1P43005 SLC2A14-213ENST00000539924 1873 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
SLC1A1P43005 CACNA1A-211ENST00000592864 1623 ntTSL 3 BASIC14.48□□□□□ -0.09
SLC1A1P43005 MORC4-202ENST00000355610 3834 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
SLC1A1P43005 SIPA1L3-201ENST00000222345 7987 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SLC1A1P43005 POTEB3-201ENST00000611217 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SLC1A1P43005 JUN-201ENST00000371222 3540 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
SLC1A1P43005 ERG-211ENST00000453032 1595 ntTSL 2 BASIC14.48□□□□□ -0.09
SLC1A1P43005 ZC3H18-201ENST00000301011 3729 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
SLC1A1P43005 CTIF-202ENST00000382998 4407 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
SLC1A1P43005 PLA2G4B-201ENST00000452633 2985 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
SLC1A1P43005 LARP4-201ENST00000293618 6296 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
SLC1A1P43005 AC139795.2-201ENST00000499900 1751 ntTSL 2 BASIC14.48□□□□□ -0.09
SLC1A1P43005 HPSE2-206ENST00000628193 1760 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
SLC1A1P43005 LINC00987-201ENST00000427111 2472 ntTSL 2 BASIC14.48□□□□□ -0.09
SLC1A1P43005 GRSF1-201ENST00000254799 6666 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
SLC1A1P43005 EWSAT1-201ENST00000415504 2214 ntTSL 2 BASIC14.48□□□□□ -0.09
SLC1A1P43005 EDEM3-201ENST00000318130 6898 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
SLC1A1P43005 SUCO-202ENST00000367723 5916 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
SLC1A1P43005 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SLC1A1P43005 MAX-201ENST00000246163 897 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
SLC1A1P43005 OR1J1-201ENST00000259357 969 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
SLC1A1P43005 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SLC1A1P43005 NME4-203ENST00000397722 1232 ntTSL 2 BASIC14.48□□□□□ -0.09
SLC1A1P43005 AC098934.1-203ENST00000442868 1262 ntBASIC14.48□□□□□ -0.09
SLC1A1P43005 NAGK-204ENST00000443872 878 ntTSL 3 BASIC14.48□□□□□ -0.09
SLC1A1P43005 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC14.48□□□□□ -0.09
SLC1A1P43005 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC14.48□□□□□ -0.09
SLC1A1P43005 POU5F1P2-201ENST00000521750 823 ntBASIC14.48□□□□□ -0.09
SLC1A1P43005 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SLC1A1P43005 KLF17P1-201ENST00000547105 1126 ntBASIC14.48□□□□□ -0.09
SLC1A1P43005 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC14.48□□□□□ -0.09
SLC1A1P43005 AC009163.3-201ENST00000563554 852 ntTSL 3 BASIC14.48□□□□□ -0.09
SLC1A1P43005 PGPEP1-206ENST00000597431 545 ntTSL 5 BASIC14.48□□□□□ -0.09
SLC1A1P43005 EAF1-AS1-208ENST00000608408 770 ntTSL 5 BASIC14.48□□□□□ -0.09
SLC1A1P43005 MEG3_2.1-201ENST00000611456 105 ntBASIC14.48□□□□□ -0.09
SLC1A1P43005 KLHL13-209ENST00000545703 3322 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SLC1A1P43005 NRXN1-222ENST00000625672 8113 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
SLC1A1P43005 MTUS1-204ENST00000381869 6256 ntTSL 5 BASIC14.48□□□□□ -0.09
SLC1A1P43005 CHD1-212ENST00000614616 8095 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
SLC1A1P43005 LAS1L-202ENST00000374807 2386 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
SLC1A1P43005 SPG11-210ENST00000558319 6426 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
SLC1A1P43005 ANGPTL2-201ENST00000373417 2575 ntTSL 2 BASIC14.48□□□□□ -0.09
SLC1A1P43005 UBTF-209ENST00000529383 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SLC1A1P43005 FTSJ1-203ENST00000396894 1669 ntTSL 2 BASIC14.48□□□□□ -0.09
SLC1A1P43005 LSS-201ENST00000356396 2995 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SLC1A1P43005 GGA1-201ENST00000325180 2528 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
SLC1A1P43005 KIAA1614-AS1-201ENST00000415647 1440 ntTSL 2 BASIC14.48□□□□□ -0.09
SLC1A1P43005 CDC45-205ENST00000437685 2072 ntTSL 2 BASIC14.48□□□□□ -0.09
SLC1A1P43005 EPB42-203ENST00000540029 2098 ntTSL 2 BASIC14.48□□□□□ -0.09
SLC1A1P43005 GTF2IRD2-201ENST00000451013 3558 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SLC1A1P43005 MBD1-225ENST00000591535 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
SLC1A1P43005 COL6A2-203ENST00000397763 3101 ntTSL 5 BASIC14.48□□□□□ -0.09
SLC1A1P43005 YWHAQ-202ENST00000381844 2216 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SLC1A1P43005 AC008132.1-202ENST00000342005 1389 ntBASIC14.47□□□□□ -0.09
SLC1A1P43005 TMEM26-202ENST00000399298 5151 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SLC1A1P43005 TMBIM1-202ENST00000396809 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SLC1A1P43005 FOXM1-210ENST00000627656 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SLC1A1P43005 PASK-204ENST00000405260 4942 ntAPPRIS P3 TSL 5 BASIC14.47□□□□□ -0.09
SLC1A1P43005 GDA-203ENST00000376986 1771 ntTSL 2 BASIC14.47□□□□□ -0.09
SLC1A1P43005 LINC02048-201ENST00000440556 1771 ntTSL 5 BASIC14.47□□□□□ -0.09
SLC1A1P43005 C20orf203-202ENST00000608990 5076 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
SLC1A1P43005 WDR24-201ENST00000248142 2763 ntTSL 5 BASIC14.47□□□□□ -0.09
SLC1A1P43005 PDE1C-205ENST00000396191 2952 ntAPPRIS ALT1 TSL 2 BASIC14.47□□□□□ -0.09
SLC1A1P43005 AL133338.1-201ENST00000565695 1517 ntBASIC14.47□□□□□ -0.09
SLC1A1P43005 ANXA11-201ENST00000265447 2526 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
SLC1A1P43005 UQCRFS1-201ENST00000304863 3475 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SLC1A1P43005 KIF3A-201ENST00000378735 3266 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SLC1A1P43005 LINC00324-201ENST00000315707 2082 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
SLC1A1P43005 TUBGCP6-201ENST00000248846 5612 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SLC1A1P43005 TMEM131L-202ENST00000409663 5017 ntAPPRIS P3 TSL 5 BASIC14.47□□□□□ -0.09
SLC1A1P43005 CSPG4P12-202ENST00000559989 7790 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
SLC1A1P43005 IL19-201ENST00000270218 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SLC1A1P43005 CST5-201ENST00000304710 756 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SLC1A1P43005 AL627231.1-201ENST00000394467 1125 ntBASIC14.47□□□□□ -0.09
SLC1A1P43005 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC14.47□□□□□ -0.09
SLC1A1P43005 AC016700.1-201ENST00000429424 312 ntBASIC14.47□□□□□ -0.09
SLC1A1P43005 GS1-124K5.4-201ENST00000445681 540 ntTSL 2 BASIC14.47□□□□□ -0.09
SLC1A1P43005 AL596276.2-201ENST00000447525 331 ntBASIC14.47□□□□□ -0.09
SLC1A1P43005 AC114947.1-202ENST00000514136 344 ntBASIC14.47□□□□□ -0.09
SLC1A1P43005 AC087269.1-202ENST00000519147 400 ntTSL 3 BASIC14.47□□□□□ -0.09
SLC1A1P43005 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC14.47□□□□□ -0.09
SLC1A1P43005 LINC01783-202ENST00000614408 828 ntBASIC14.47□□□□□ -0.09
SLC1A1P43005 BX284668.2-205ENST00000619677 828 ntBASIC14.47□□□□□ -0.09
SLC1A1P43005 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
SLC1A1P43005 FAM219A-201ENST00000297620 3588 ntAPPRIS P3 TSL 2 BASIC14.47□□□□□ -0.09
SLC1A1P43005 AC004147.4-201ENST00000636421 1844 ntTSL 5 BASIC14.47□□□□□ -0.09
SLC1A1P43005 DNAJC14-202ENST00000317287 2774 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
SLC1A1P43005 LYN-204ENST00000520220 5808 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SLC1A1P43005 USP19-207ENST00000434032 4677 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
SLC1A1P43005 ACER1-201ENST00000301452 1445 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SLC1A1P43005 SLC37A4-202ENST00000357590 2356 ntTSL 5 BASIC14.47□□□□□ -0.09
SLC1A1P43005 CAMKV-215ENST00000488336 2905 ntTSL 2 BASIC14.47□□□□□ -0.09
SLC1A1P43005 AC113189.2-201ENST00000575310 1975 ntTSL 2 BASIC14.47□□□□□ -0.09
SLC1A1P43005 SYNE3-201ENST00000334258 3275 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
SLC1A1P43005 CAND2-204ENST00000456430 4573 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SLC1A1P43005 OCRL-201ENST00000357121 5138 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
SLC1A1P43005 USP22-201ENST00000261497 5220 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 59.9 ms