Protein–RNA interactions for Protein: P40198

CEACAM3, Carcinoembryonic antigen-related cell adhesion molecule 3, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM3P40198 LILRA2-203ENST00000391737 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
CEACAM3P40198 RGS12-201ENST00000336727 4674 ntAPPRIS P4 TSL 1 (best) BASIC11.38□□□□□ -0.59
CEACAM3P40198 NOB1-201ENST00000268802 1734 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
CEACAM3P40198 AC010255.3-203ENST00000509403 1727 ntAPPRIS P1 TSL 2 BASIC11.38□□□□□ -0.59
CEACAM3P40198 ARPC1A-201ENST00000262942 1565 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
CEACAM3P40198 AC008620.2-201ENST00000510294 1569 ntBASIC11.37□□□□□ -0.59
CEACAM3P40198 NELFE-201ENST00000375425 1405 ntAPPRIS ALT2 TSL 2 BASIC11.37□□□□□ -0.59
CEACAM3P40198 CTSS-202ENST00000448301 1421 ntTSL 2 BASIC11.37□□□□□ -0.59
CEACAM3P40198 GDPD5-201ENST00000336898 3523 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
CEACAM3P40198 YLPM1-207ENST00000552421 4899 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
CEACAM3P40198 ZFP64-203ENST00000361387 2545 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
CEACAM3P40198 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
CEACAM3P40198 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
CEACAM3P40198 AMT-221ENST00000538581 2038 ntTSL 2 BASIC11.37□□□□□ -0.59
CEACAM3P40198 VWA5B1-201ENST00000289815 4475 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
CEACAM3P40198 KAT7-204ENST00000454930 1774 ntTSL 2 BASIC11.37□□□□□ -0.59
CEACAM3P40198 SLC8A3-205ENST00000394330 2622 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
CEACAM3P40198 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
CEACAM3P40198 THOC6-201ENST00000253952 1246 ntTSL 2 BASIC11.37□□□□□ -0.59
CEACAM3P40198 DERL3-202ENST00000318109 860 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
CEACAM3P40198 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
CEACAM3P40198 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC11.37□□□□□ -0.59
CEACAM3P40198 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
CEACAM3P40198 BANF1-202ENST00000445560 946 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
CEACAM3P40198 TEX36-AS1-202ENST00000446081 749 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
CEACAM3P40198 AL139420.2-201ENST00000449439 410 ntTSL 3 BASIC11.37□□□□□ -0.59
CEACAM3P40198 RN7SL769P-201ENST00000469386 295 ntBASIC11.37□□□□□ -0.59
CEACAM3P40198 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC11.37□□□□□ -0.59
CEACAM3P40198 CD164-210ENST00000512821 964 ntTSL 2 BASIC11.37□□□□□ -0.59
CEACAM3P40198 EIF3M-203ENST00000524896 1207 ntTSL 2 BASIC11.37□□□□□ -0.59
CEACAM3P40198 AP001160.1-201ENST00000535817 565 ntTSL 3 BASIC11.37□□□□□ -0.59
CEACAM3P40198 C12orf73-210ENST00000552940 685 ntTSL 2 BASIC11.37□□□□□ -0.59
CEACAM3P40198 MIR3677-201ENST00000578964 60 ntBASIC11.37□□□□□ -0.59
CEACAM3P40198 SIGLEC18P-201ENST00000602271 909 ntBASIC11.37□□□□□ -0.59
CEACAM3P40198 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC11.37□□□□□ -0.59
CEACAM3P40198 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC11.37□□□□□ -0.59
CEACAM3P40198 MTUS2-206ENST00000612955 7430 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
CEACAM3P40198 USP47-202ENST00000339865 7775 ntTSL 2 BASIC11.37□□□□□ -0.59
CEACAM3P40198 TAGLN2-203ENST00000368097 1604 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
CEACAM3P40198 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
CEACAM3P40198 TBR1-201ENST00000389554 4009 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
CEACAM3P40198 BCAS4-201ENST00000358791 1378 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
CEACAM3P40198 CCDC51-202ENST00000412398 1385 ntTSL 2 BASIC11.37□□□□□ -0.59
CEACAM3P40198 ANXA8L1-202ENST00000611655 1398 ntTSL 2 BASIC11.37□□□□□ -0.59
CEACAM3P40198 METTL7B-202ENST00000614691 1368 ntTSL 5 BASIC11.37□□□□□ -0.59
CEACAM3P40198 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
CEACAM3P40198 MAP7D3-201ENST00000316077 4567 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
CEACAM3P40198 CXCR5-201ENST00000292174 4431 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
CEACAM3P40198 KRT8P43-201ENST00000406052 1458 ntBASIC11.37□□□□□ -0.59
CEACAM3P40198 TBX6-202ENST00000395224 1803 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
CEACAM3P40198 CXorf40A-212ENST00000514208 1840 ntAPPRIS ALT1 TSL 5 BASIC11.37□□□□□ -0.59
CEACAM3P40198 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC11.37□□□□□ -0.59
CEACAM3P40198 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC11.37□□□□□ -0.59
CEACAM3P40198 MAP3K21-202ENST00000366623 3910 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
CEACAM3P40198 AC090114.2-201ENST00000608477 7054 ntBASIC11.37□□□□□ -0.59
CEACAM3P40198 CHRNA1-204ENST00000409323 1585 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
CEACAM3P40198 TBC1D27-202ENST00000424239 1573 ntBASIC11.37□□□□□ -0.59
CEACAM3P40198 CYP51A1-AS1-201ENST00000453068 2957 ntTSL 5 BASIC11.37□□□□□ -0.59
CEACAM3P40198 SLC20A2-207ENST00000520179 2284 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
CEACAM3P40198 Z98885.2-201ENST00000565177 1567 ntTSL 2 BASIC11.37□□□□□ -0.59
CEACAM3P40198 ADCY7-202ENST00000394697 6213 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
CEACAM3P40198 CREBL2-201ENST00000228865 3754 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
CEACAM3P40198 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
CEACAM3P40198 BRSK2-207ENST00000528710 3528 ntTSL 2 BASIC11.36□□□□□ -0.59
CEACAM3P40198 LHFPL1-201ENST00000371968 1675 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
CEACAM3P40198 LINC01535-206ENST00000592712 1699 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
CEACAM3P40198 NUP58-206ENST00000463407 6360 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
CEACAM3P40198 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
CEACAM3P40198 TARBP2-202ENST00000394357 1402 ntTSL 3 BASIC11.36□□□□□ -0.59
CEACAM3P40198 ALDOA-202ENST00000395240 1447 ntAPPRIS ALT1 TSL 5 BASIC11.36□□□□□ -0.59
CEACAM3P40198 ATF4-202ENST00000396680 1419 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
CEACAM3P40198 CDK11A-201ENST00000356200 2653 ntTSL 5 BASIC11.36□□□□□ -0.59
CEACAM3P40198 CIC-204ENST00000572681 8218 ntTSL 5 BASIC11.36□□□□□ -0.59
CEACAM3P40198 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC11.36□□□□□ -0.59
CEACAM3P40198 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC11.36□□□□□ -0.59
CEACAM3P40198 EPRS-201ENST00000366923 5014 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
CEACAM3P40198 AGAP10P-201ENST00000454844 2418 ntBASIC11.36□□□□□ -0.59
CEACAM3P40198 KCNIP1-210ENST00000636734 1613 ntTSL 5 BASIC11.36□□□□□ -0.59
CEACAM3P40198 AC023794.5-201ENST00000564380 2157 ntBASIC11.36□□□□□ -0.59
CEACAM3P40198 L3MBTL1-206ENST00000427442 3157 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
CEACAM3P40198 CACNA1G-219ENST00000507609 6849 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
CEACAM3P40198 SEC61B-201ENST00000223641 545 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
CEACAM3P40198 TMSB10-201ENST00000233143 496 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
CEACAM3P40198 PPDPF-202ENST00000370179 868 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
CEACAM3P40198 MAPK13-202ENST00000373759 1036 ntTSL 5 BASIC11.36□□□□□ -0.59
CEACAM3P40198 APRT-201ENST00000378364 947 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
CEACAM3P40198 CALCA-203ENST00000396372 581 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
CEACAM3P40198 PHACTR2-204ENST00000397980 745 ntTSL 3 BASIC11.36□□□□□ -0.59
CEACAM3P40198 MAGEA5-201ENST00000446757 942 ntBASIC11.36□□□□□ -0.59
CEACAM3P40198 LINC00322-201ENST00000450205 699 ntTSL 3 BASIC11.36□□□□□ -0.59
CEACAM3P40198 AL355376.1-201ENST00000456082 517 ntTSL 3 BASIC11.36□□□□□ -0.59
CEACAM3P40198 FTH1P22-201ENST00000456305 520 ntBASIC11.36□□□□□ -0.59
CEACAM3P40198 AC022494.1-201ENST00000466044 728 ntBASIC11.36□□□□□ -0.59
CEACAM3P40198 RN7SL767P-201ENST00000493013 295 ntBASIC11.36□□□□□ -0.59
CEACAM3P40198 SEC61B-203ENST00000498603 587 ntTSL 3 BASIC11.36□□□□□ -0.59
CEACAM3P40198 LINC01598-205ENST00000508763 719 ntTSL 5 BASIC11.36□□□□□ -0.59
CEACAM3P40198 AC087269.1-202ENST00000519147 400 ntTSL 3 BASIC11.36□□□□□ -0.59
CEACAM3P40198 AC138230.1-201ENST00000525893 664 ntTSL 5 BASIC11.36□□□□□ -0.59
CEACAM3P40198 SPAG5-AS1-203ENST00000554154 491 ntTSL 2 BASIC11.36□□□□□ -0.59
CEACAM3P40198 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC11.36□□□□□ -0.59
Retrieved 100 of 98,524 protein–RNA pairs in 77.6 ms