Protein–RNA interactions for Protein: P17655

CAPN2, Calpain-2 catalytic subunit, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN2P17655 RBFADN-204ENST00000568911 5187 ntTSL 2 BASIC16.06■□□□□ 0.16
CAPN2P17655 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
CAPN2P17655 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CAPN2P17655 TMEM9-203ENST00000367333 1564 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
CAPN2P17655 NIT1-204ENST00000392190 1518 ntAPPRIS ALT1 TSL 3 BASIC16.06■□□□□ 0.16
CAPN2P17655 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC16.06■□□□□ 0.16
CAPN2P17655 LILRA2-203ENST00000391737 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
CAPN2P17655 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC16.06■□□□□ 0.16
CAPN2P17655 KRT8P28-201ENST00000433288 1390 ntBASIC16.06■□□□□ 0.16
CAPN2P17655 WASH7P-201ENST00000488147 1351 ntBASIC16.06■□□□□ 0.16
CAPN2P17655 COQ3-201ENST00000254759 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CAPN2P17655 FXYD3-208ENST00000604404 1322 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CAPN2P17655 CTSL-202ENST00000342020 933 ntTSL 2 BASIC16.06■□□□□ 0.16
CAPN2P17655 GALP-201ENST00000357330 938 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CAPN2P17655 CHTF8-202ENST00000398235 1073 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
CAPN2P17655 CXorf40A-205ENST00000423540 1208 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
CAPN2P17655 GALP-202ENST00000440823 889 ntTSL 5 BASIC16.06■□□□□ 0.16
CAPN2P17655 HNRNPA1P42-201ENST00000458678 957 ntBASIC16.06■□□□□ 0.16
CAPN2P17655 AC112487.1-201ENST00000498032 1097 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CAPN2P17655 LINC02435-201ENST00000508291 584 ntTSL 3 BASIC16.06■□□□□ 0.16
CAPN2P17655 LINC01485-202ENST00000520324 566 ntTSL 4 BASIC16.06■□□□□ 0.16
CAPN2P17655 EHF-208ENST00000530286 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CAPN2P17655 ORAOV1-205ENST00000535657 709 ntAPPRIS P2 TSL 3 BASIC16.06■□□□□ 0.16
CAPN2P17655 FAM60A-207ENST00000542983 738 ntTSL 4 BASIC16.06■□□□□ 0.16
CAPN2P17655 RPL18-205ENST00000549273 1036 ntTSL 2 BASIC16.06■□□□□ 0.16
CAPN2P17655 CES1P2-201ENST00000566467 1242 ntBASIC16.06■□□□□ 0.16
CAPN2P17655 AC023421.2-201ENST00000589510 313 ntTSL 5 BASIC16.06■□□□□ 0.16
CAPN2P17655 PGPEP1-203ENST00000595066 762 ntTSL 2 BASIC16.06■□□□□ 0.16
CAPN2P17655 AL160191.2-201ENST00000603975 601 ntBASIC16.06■□□□□ 0.16
CAPN2P17655 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC16.06■□□□□ 0.16
CAPN2P17655 SCD5-202ENST00000319540 3101 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CAPN2P17655 NR4A2-209ENST00000426264 2642 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CAPN2P17655 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CAPN2P17655 WDR17-205ENST00000508596 4294 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CAPN2P17655 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CAPN2P17655 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
CAPN2P17655 CDC45-205ENST00000437685 2072 ntTSL 2 BASIC16.06■□□□□ 0.16
CAPN2P17655 SLC35B2-206ENST00000615337 2014 ntTSL 4 BASIC16.06■□□□□ 0.16
CAPN2P17655 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC16.06■□□□□ 0.16
CAPN2P17655 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC16.06■□□□□ 0.16
CAPN2P17655 METAP2-205ENST00000546753 1862 ntTSL 2 BASIC16.05■□□□□ 0.16
CAPN2P17655 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC16.05■□□□□ 0.16
CAPN2P17655 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
CAPN2P17655 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CAPN2P17655 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CAPN2P17655 SVOPL-203ENST00000421622 1653 ntTSL 5 BASIC16.05■□□□□ 0.16
CAPN2P17655 CES3-202ENST00000394037 3817 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CAPN2P17655 FAM129B-202ENST00000373314 3760 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CAPN2P17655 BIRC5-202ENST00000350051 2630 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CAPN2P17655 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CAPN2P17655 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
CAPN2P17655 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CAPN2P17655 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC16.05■□□□□ 0.16
CAPN2P17655 PPP4R3B-205ENST00000616288 4310 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CAPN2P17655 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC16.05■□□□□ 0.16
CAPN2P17655 PLSCR1-214ENST00000487389 1443 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
CAPN2P17655 CLCN7-203ENST00000448525 4151 ntTSL 2 BASIC16.05■□□□□ 0.16
CAPN2P17655 AC106818.1-201ENST00000623223 3242 ntBASIC16.05■□□□□ 0.16
CAPN2P17655 WASH3P-207ENST00000560956 1394 ntBASIC16.05■□□□□ 0.16
CAPN2P17655 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CAPN2P17655 SPHK2-201ENST00000245222 2963 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
CAPN2P17655 APOA1-203ENST00000375320 940 ntAPPRIS P1 TSL 3 BASIC16.05■□□□□ 0.16
CAPN2P17655 FES-203ENST00000394302 2133 ntTSL 5 BASIC16.05■□□□□ 0.16
CAPN2P17655 AC128689.1-202ENST00000459861 827 ntTSL 3 BASIC16.05■□□□□ 0.16
CAPN2P17655 AC078785.1-204ENST00000460707 764 ntTSL 3 BASIC16.05■□□□□ 0.16
CAPN2P17655 TMEM14B-208ENST00000467317 1224 ntTSL 2 BASIC16.05■□□□□ 0.16
CAPN2P17655 RN7SL277P-201ENST00000481521 288 ntBASIC16.05■□□□□ 0.16
CAPN2P17655 NMNAT3-213ENST00000512391 794 ntTSL 3 BASIC16.05■□□□□ 0.16
CAPN2P17655 AC092612.1-201ENST00000514501 998 ntBASIC16.05■□□□□ 0.16
CAPN2P17655 EVX1-AS-203ENST00000519218 554 ntTSL 4 BASIC16.05■□□□□ 0.16
CAPN2P17655 C11orf97-201ENST00000542198 701 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
CAPN2P17655 AC012174.1-201ENST00000562349 714 ntTSL 3 BASIC16.05■□□□□ 0.16
CAPN2P17655 LINC02252-201ENST00000565706 487 ntTSL 3 BASIC16.05■□□□□ 0.16
CAPN2P17655 LINC01869-204ENST00000635639 1047 ntTSL 5 BASIC16.05■□□□□ 0.16
CAPN2P17655 LINC01792-201ENST00000452787 2050 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CAPN2P17655 FZD6-206ENST00000523739 2774 ntTSL 2 BASIC16.05■□□□□ 0.16
CAPN2P17655 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CAPN2P17655 TICAM1-201ENST00000248244 2676 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CAPN2P17655 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CAPN2P17655 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CAPN2P17655 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CAPN2P17655 PHF8-202ENST00000338154 6062 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
CAPN2P17655 FAM168A-202ENST00000356467 1767 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CAPN2P17655 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CAPN2P17655 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
CAPN2P17655 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC16.05■□□□□ 0.16
CAPN2P17655 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC16.04■□□□□ 0.16
CAPN2P17655 EFHC1-227ENST00000637089 2133 ntTSL 5 BASIC16.04■□□□□ 0.16
CAPN2P17655 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC16.04■□□□□ 0.16
CAPN2P17655 PAIP2-201ENST00000265192 1459 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CAPN2P17655 ELN-210ENST00000380584 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
CAPN2P17655 TTC38-201ENST00000381031 2610 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CAPN2P17655 AC244197.3-201ENST00000422081 2635 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
CAPN2P17655 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC16.04■□□□□ 0.16
CAPN2P17655 ELN-211ENST00000414324 3139 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
CAPN2P17655 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC16.04■□□□□ 0.16
CAPN2P17655 SNX19-211ENST00000533214 3096 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CAPN2P17655 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CAPN2P17655 GMEB1-202ENST00000361872 1894 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CAPN2P17655 GPR88-201ENST00000315033 3491 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 53 ms