Protein–RNA interactions for Protein: P16112

ACAN, Aggrecan core protein, humanhuman

Predictions only

Length 2,415 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACANP16112 RN7SL134P-201ENST00000579756 303 ntBASIC11.14□□□□□ -0.63
ACANP16112 AC092634.5-206ENST00000593670 812 ntTSL 5 BASIC11.14□□□□□ -0.63
ACANP16112 AC008982.1-201ENST00000594769 963 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
ACANP16112 AL356583.1-201ENST00000398739 1371 ntBASIC11.14□□□□□ -0.63
ACANP16112 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
ACANP16112 RCC2P5-201ENST00000492126 1487 ntBASIC11.13□□□□□ -0.63
ACANP16112 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
ACANP16112 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
ACANP16112 STK25-235ENST00000543554 2556 ntTSL 2 BASIC11.13□□□□□ -0.63
ACANP16112 NRADDP-202ENST00000641269 1585 ntBASIC11.13□□□□□ -0.63
ACANP16112 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC11.13□□□□□ -0.63
ACANP16112 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
ACANP16112 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
ACANP16112 PCMTD1-201ENST00000360540 4252 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
ACANP16112 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC11.13□□□□□ -0.63
ACANP16112 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
ACANP16112 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC11.13□□□□□ -0.63
ACANP16112 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC11.13□□□□□ -0.63
ACANP16112 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC11.13□□□□□ -0.63
ACANP16112 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
ACANP16112 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC11.13□□□□□ -0.63
ACANP16112 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
ACANP16112 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
ACANP16112 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
ACANP16112 SLC25A5-201ENST00000317881 1274 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
ACANP16112 TPM3-204ENST00000323144 1088 ntTSL 2 BASIC11.13□□□□□ -0.63
ACANP16112 TPM3P7-201ENST00000338274 732 ntBASIC11.13□□□□□ -0.63
ACANP16112 SNORA30.1-201ENST00000363193 129 ntBASIC11.13□□□□□ -0.63
ACANP16112 NR0B1-201ENST00000378963 475 ntTSL 2 BASIC11.13□□□□□ -0.63
ACANP16112 CACYBPP3-201ENST00000406011 625 ntBASIC11.13□□□□□ -0.63
ACANP16112 RNA5SP407-201ENST00000410275 110 ntBASIC11.13□□□□□ -0.63
ACANP16112 AL390726.3-201ENST00000567428 635 ntTSL 5 BASIC11.13□□□□□ -0.63
ACANP16112 NSRP1-213ENST00000584423 482 ntTSL 2 BASIC11.13□□□□□ -0.63
ACANP16112 MIR663AHG-218ENST00000598448 804 ntTSL 5 BASIC11.13□□□□□ -0.63
ACANP16112 AC008894.2-202ENST00000599676 1027 ntTSL 3 BASIC11.13□□□□□ -0.63
ACANP16112 MIR7704-201ENST00000610524 59 ntBASIC11.13□□□□□ -0.63
ACANP16112 Metazoa_SRP.47-201ENST00000616942 279 ntBASIC11.13□□□□□ -0.63
ACANP16112 MIR941-1-201ENST00000636396 72 ntBASIC11.13□□□□□ -0.63
ACANP16112 CD9-212ENST00000610354 1315 ntTSL 5 BASIC11.13□□□□□ -0.63
ACANP16112 ANP32B-201ENST00000339399 1463 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
ACANP16112 ANXA13-201ENST00000262219 1588 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
ACANP16112 SS18-201ENST00000269137 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC11.13□□□□□ -0.63
ACANP16112 ATP1B3-201ENST00000286371 1811 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
ACANP16112 GFI1B-207ENST00000636137 1870 ntTSL 5 BASIC11.13□□□□□ -0.63
ACANP16112 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC11.13□□□□□ -0.63
ACANP16112 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
ACANP16112 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
ACANP16112 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
ACANP16112 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC11.13□□□□□ -0.63
ACANP16112 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
ACANP16112 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
ACANP16112 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC11.13□□□□□ -0.63
ACANP16112 SLC4A7-211ENST00000445684 4061 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
ACANP16112 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
ACANP16112 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC11.13□□□□□ -0.63
ACANP16112 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
ACANP16112 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
ACANP16112 APEX1-201ENST00000216714 1484 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
ACANP16112 CTNNBL1-203ENST00000373473 1493 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
ACANP16112 LIMS4-204ENST00000632897 1460 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
ACANP16112 RPLP1-202ENST00000357790 445 ntTSL 2 BASIC11.13□□□□□ -0.63
ACANP16112 LY6G6F-201ENST00000375832 920 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
ACANP16112 AC159540.1-201ENST00000422600 555 ntTSL 4 BASIC11.13□□□□□ -0.63
ACANP16112 ZBTB46-AS1-201ENST00000435912 533 ntTSL 3 BASIC11.13□□□□□ -0.63
ACANP16112 RN7SL452P-201ENST00000482923 291 ntBASIC11.13□□□□□ -0.63
ACANP16112 AP002852.2-202ENST00000523572 592 ntTSL 4 BASIC11.13□□□□□ -0.63
ACANP16112 AC109597.2-201ENST00000569407 927 ntTSL 3 BASIC11.13□□□□□ -0.63
ACANP16112 AC009779.7-201ENST00000609031 469 ntBASIC11.13□□□□□ -0.63
ACANP16112 AC005609.1-201ENST00000625195 617 ntTSL 5 BASIC11.13□□□□□ -0.63
ACANP16112 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
ACANP16112 HEPACAM-201ENST00000298251 3602 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
ACANP16112 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
ACANP16112 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
ACANP16112 ADORA2A-AS1-201ENST00000326341 2557 ntTSL 5 BASIC11.12□□□□□ -0.63
ACANP16112 SLC22A12-202ENST00000377567 2599 ntTSL 5 BASIC11.12□□□□□ -0.63
ACANP16112 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
ACANP16112 MECR-202ENST00000373791 2416 ntTSL 2 BASIC11.12□□□□□ -0.63
ACANP16112 PWWP2A-202ENST00000456329 3991 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
ACANP16112 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC11.12□□□□□ -0.63
ACANP16112 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
ACANP16112 AC241585.2-201ENST00000578899 2307 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
ACANP16112 DANT2-201ENST00000430756 2079 ntTSL 3 BASIC11.12□□□□□ -0.63
ACANP16112 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC11.12□□□□□ -0.63
ACANP16112 OS9-207ENST00000439210 1946 ntTSL 2 BASIC11.12□□□□□ -0.63
ACANP16112 GOSR2-233ENST00000640068 3103 ntTSL 5 BASIC11.12□□□□□ -0.63
ACANP16112 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC11.12□□□□□ -0.63
ACANP16112 TRIQK-219ENST00000523580 1630 ntTSL 2 BASIC11.12□□□□□ -0.63
ACANP16112 AC023509.3-202ENST00000591834 1609 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
ACANP16112 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
ACANP16112 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
ACANP16112 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC11.12□□□□□ -0.63
ACANP16112 PSKH1-201ENST00000291041 3481 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
ACANP16112 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
ACANP16112 TSGA13-201ENST00000356588 1372 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
ACANP16112 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
ACANP16112 KRT18P45-201ENST00000515347 1333 ntBASIC11.12□□□□□ -0.63
ACANP16112 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
ACANP16112 PRORSD1P-202ENST00000563365 2154 ntBASIC11.12□□□□□ -0.63
ACANP16112 SGCA-202ENST00000344627 1057 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
ACANP16112 VSTM1-205ENST00000425006 608 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Retrieved 100 of 98,524 protein–RNA pairs in 81.8 ms