Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 TNPO2-218ENST00000592287 2914 ntAPPRIS P4 TSL 1 (best) BASIC10.53□□□□□ -0.72
HLA-DRB4X5D2U9 NFKBIZ-202ENST00000326172 3923 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.72
HLA-DRB4X5D2U9 AP000347.1-201ENST00000417194 5004 ntTSL 1 (best) BASIC10.52□□□□□ -0.72
HLA-DRB4X5D2U9 SLC44A1-202ENST00000374723 9640 ntAPPRIS ALT1 TSL 1 (best) BASIC10.52□□□□□ -0.72
HLA-DRB4X5D2U9 TCN2-202ENST00000405742 1936 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.72
HLA-DRB4X5D2U9 MKL1-203ENST00000402042 4343 ntTSL 1 (best) BASIC10.52□□□□□ -0.72
HLA-DRB4X5D2U9 TOLLIP-203ENST00000525159 3429 ntTSL 2 BASIC10.52□□□□□ -0.72
HLA-DRB4X5D2U9 CACNA1G-229ENST00000514181 6795 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.72
HLA-DRB4X5D2U9 CKMT1B-201ENST00000300283 1779 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.72
HLA-DRB4X5D2U9 CKMT1A-204ENST00000434505 1779 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.72
HLA-DRB4X5D2U9 RAB42-201ENST00000373826 1950 ntTSL 1 (best) BASIC10.52□□□□□ -0.72
HLA-DRB4X5D2U9 AC104129.1-202ENST00000480694 4481 ntTSL 2 BASIC10.52□□□□□ -0.73
HLA-DRB4X5D2U9 TRDMT1-203ENST00000377799 3527 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
HLA-DRB4X5D2U9 NRROS-201ENST00000328557 2564 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
HLA-DRB4X5D2U9 LINC01165-201ENST00000445190 1623 ntBASIC10.52□□□□□ -0.73
HLA-DRB4X5D2U9 RARS2-201ENST00000369536 1818 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
HLA-DRB4X5D2U9 SLC46A3-201ENST00000266943 3173 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
HLA-DRB4X5D2U9 SLC5A4-201ENST00000266086 2030 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
HLA-DRB4X5D2U9 REC8-213ENST00000620473 2405 ntAPPRIS P1 TSL 2 BASIC10.52□□□□□ -0.73
HLA-DRB4X5D2U9 C14orf39-201ENST00000321731 2813 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
HLA-DRB4X5D2U9 ADGRD1-201ENST00000261654 5168 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
HLA-DRB4X5D2U9 KAZN-205ENST00000400798 3643 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
HLA-DRB4X5D2U9 MAX-201ENST00000246163 897 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
HLA-DRB4X5D2U9 RAB36-202ENST00000341989 936 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
HLA-DRB4X5D2U9 AC239868.1-201ENST00000369385 493 ntBASIC10.52□□□□□ -0.73
HLA-DRB4X5D2U9 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
HLA-DRB4X5D2U9 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
HLA-DRB4X5D2U9 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
HLA-DRB4X5D2U9 IGHV3-13-201ENST00000390602 430 ntAPPRIS P1 BASIC10.52□□□□□ -0.73
HLA-DRB4X5D2U9 Z82188.2-201ENST00000419128 630 ntTSL 5 BASIC10.52□□□□□ -0.73
HLA-DRB4X5D2U9 AC016700.1-201ENST00000429424 312 ntBASIC10.52□□□□□ -0.73
HLA-DRB4X5D2U9 TAC3-208ENST00000441881 731 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
HLA-DRB4X5D2U9 AC244107.1-201ENST00000442033 332 ntBASIC10.52□□□□□ -0.73
HLA-DRB4X5D2U9 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC10.52□□□□□ -0.73
HLA-DRB4X5D2U9 ARTN-209ENST00000479128 471 ntTSL 3 BASIC10.52□□□□□ -0.73
HLA-DRB4X5D2U9 CHCHD2P2-201ENST00000503744 321 ntBASIC10.52□□□□□ -0.73
HLA-DRB4X5D2U9 CPLX2-209ENST00000515094 576 ntAPPRIS P1 TSL 4 BASIC10.52□□□□□ -0.73
HLA-DRB4X5D2U9 SCARNA20.5-201ENST00000516991 142 ntBASIC10.52□□□□□ -0.73
HLA-DRB4X5D2U9 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC10.52□□□□□ -0.73
HLA-DRB4X5D2U9 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC10.52□□□□□ -0.73
HLA-DRB4X5D2U9 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC10.52□□□□□ -0.73
HLA-DRB4X5D2U9 TAC3-211ENST00000615887 1120 ntAPPRIS P1 TSL 2 BASIC10.52□□□□□ -0.73
HLA-DRB4X5D2U9 CR392039.2-201ENST00000623182 509 ntBASIC10.52□□□□□ -0.73
HLA-DRB4X5D2U9 PRR12-201ENST00000418929 6955 ntAPPRIS P2 TSL 5 BASIC10.52□□□□□ -0.73
HLA-DRB4X5D2U9 ZNF576-202ENST00000391965 1468 ntAPPRIS P1 TSL 2 BASIC10.52□□□□□ -0.73
HLA-DRB4X5D2U9 PPHLN1-206ENST00000395580 1693 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
HLA-DRB4X5D2U9 PDE4C-204ENST00000539010 1699 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
HLA-DRB4X5D2U9 AL157791.1-201ENST00000553667 1699 ntBASIC10.52□□□□□ -0.73
HLA-DRB4X5D2U9 DNAJB13-201ENST00000339764 1875 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
HLA-DRB4X5D2U9 PDE9A-201ENST00000291539 2058 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
HLA-DRB4X5D2U9 ARMCX3-203ENST00000471229 2051 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
HLA-DRB4X5D2U9 AL031728.1-201ENST00000449034 2479 ntTSL 3 BASIC10.52□□□□□ -0.73
HLA-DRB4X5D2U9 LDB3-202ENST00000361373 5297 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
HLA-DRB4X5D2U9 NR3C2-209ENST00000625323 5909 ntTSL 5 BASIC10.52□□□□□ -0.73
HLA-DRB4X5D2U9 UGT3A1-201ENST00000274278 5122 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
HLA-DRB4X5D2U9 MTG2-201ENST00000370823 2929 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
HLA-DRB4X5D2U9 ZNF75A-205ENST00000574298 2347 ntAPPRIS P1 TSL 2 BASIC10.52□□□□□ -0.73
HLA-DRB4X5D2U9 EFHC1-227ENST00000637089 2133 ntTSL 5 BASIC10.52□□□□□ -0.73
HLA-DRB4X5D2U9 SELENOV-202ENST00000423711 1701 ntTSL 5 BASIC10.52□□□□□ -0.73
HLA-DRB4X5D2U9 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
HLA-DRB4X5D2U9 AC138761.4-201ENST00000578881 1514 ntTSL 3 BASIC10.52□□□□□ -0.73
HLA-DRB4X5D2U9 DIABLO-201ENST00000267169 1316 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
HLA-DRB4X5D2U9 INCENP-202ENST00000394818 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
HLA-DRB4X5D2U9 FRMPD2B-201ENST00000431305 1347 ntBASIC10.52□□□□□ -0.73
HLA-DRB4X5D2U9 TUBB4AP1-201ENST00000450755 1325 ntBASIC10.52□□□□□ -0.73
HLA-DRB4X5D2U9 GATA2-201ENST00000341105 3367 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
HLA-DRB4X5D2U9 GPRC5B-209ENST00000569479 2984 ntAPPRIS P2 TSL 5 BASIC10.52□□□□□ -0.73
HLA-DRB4X5D2U9 INMT-201ENST00000013222 2559 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
HLA-DRB4X5D2U9 CENPL-202ENST00000356198 2357 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
HLA-DRB4X5D2U9 ACADM-201ENST00000370834 2172 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
HLA-DRB4X5D2U9 HPS3-201ENST00000296051 4665 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
HLA-DRB4X5D2U9 KLF7-204ENST00000423015 1788 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
HLA-DRB4X5D2U9 ENG-204ENST00000480266 2804 ntAPPRIS ALT2 TSL 2 BASIC10.52□□□□□ -0.73
HLA-DRB4X5D2U9 TBX3-202ENST00000349155 4723 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
HLA-DRB4X5D2U9 SLC35G2-201ENST00000393079 1577 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
HLA-DRB4X5D2U9 LINC00334-203ENST00000638500 1377 ntTSL 5 BASIC10.52□□□□□ -0.73
HLA-DRB4X5D2U9 YWHAQ-201ENST00000238081 2208 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
HLA-DRB4X5D2U9 USP6NL-205ENST00000609104 11377 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
HLA-DRB4X5D2U9 THSD7A-205ENST00000617773 10583 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
HLA-DRB4X5D2U9 BRD7P5-201ENST00000299197 1822 ntBASIC10.51□□□□□ -0.73
HLA-DRB4X5D2U9 RNF41-202ENST00000394013 2452 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
HLA-DRB4X5D2U9 PLD1-201ENST00000331659 2906 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
HLA-DRB4X5D2U9 NPTN-IT1-201ENST00000628401 2283 ntBASIC10.51□□□□□ -0.73
HLA-DRB4X5D2U9 GAPVD1-205ENST00000394084 3190 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
HLA-DRB4X5D2U9 TMEM260-201ENST00000261556 4264 ntAPPRIS P1 TSL 2 BASIC10.51□□□□□ -0.73
HLA-DRB4X5D2U9 RBM44-201ENST00000316997 4282 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
HLA-DRB4X5D2U9 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC10.51□□□□□ -0.73
HLA-DRB4X5D2U9 DUT-208ENST00000559540 1441 ntTSL 2 BASIC10.51□□□□□ -0.73
HLA-DRB4X5D2U9 B4GALT3-202ENST00000367998 1871 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
HLA-DRB4X5D2U9 AL365181.3-201ENST00000605886 3222 ntBASIC10.51□□□□□ -0.73
HLA-DRB4X5D2U9 INTS6-201ENST00000311234 3662 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
HLA-DRB4X5D2U9 FANCC-201ENST00000289081 4585 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
HLA-DRB4X5D2U9 LAMA3-202ENST00000313654 10661 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
HLA-DRB4X5D2U9 AL121827.1-201ENST00000370257 3264 ntTSL 2 BASIC10.51□□□□□ -0.73
HLA-DRB4X5D2U9 RGS9-201ENST00000262406 2375 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
HLA-DRB4X5D2U9 SPOCK2-201ENST00000317376 5328 ntAPPRIS P2 TSL 1 (best) BASIC10.51□□□□□ -0.73
HLA-DRB4X5D2U9 AC138028.6-201ENST00000616106 1482 ntBASIC10.51□□□□□ -0.73
HLA-DRB4X5D2U9 RNF43-208ENST00000584437 5575 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
HLA-DRB4X5D2U9 TRAK1-210ENST00000613405 4672 ntTSL 2 BASIC10.51□□□□□ -0.73
HLA-DRB4X5D2U9 CIPC-201ENST00000361786 4486 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Retrieved 100 of 98,524 protein–RNA pairs in 52.6 ms