Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 RN7SL487P-201ENST00000468140 344 ntBASIC14.95□□□□□ -0.02
LRCH3Q96II8 RPL30-213ENST00000523172 274 ntTSL 5 BASIC14.95□□□□□ -0.02
LRCH3Q96II8 AP002852.2-202ENST00000523572 592 ntTSL 4 BASIC14.95□□□□□ -0.02
LRCH3Q96II8 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
LRCH3Q96II8 AL353708.1-201ENST00000567904 1257 ntBASIC14.95□□□□□ -0.02
LRCH3Q96II8 MIR1587-201ENST00000583319 53 ntBASIC14.95□□□□□ -0.02
LRCH3Q96II8 AC091132.6-201ENST00000586411 826 ntTSL 5 BASIC14.95□□□□□ -0.02
LRCH3Q96II8 AC010319.4-201ENST00000593957 691 ntTSL 3 BASIC14.95□□□□□ -0.02
LRCH3Q96II8 IRF3-213ENST00000596765 710 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
LRCH3Q96II8 AL035427.1-201ENST00000602441 387 ntTSL 3 BASIC14.95□□□□□ -0.02
LRCH3Q96II8 PDLIM1P1-201ENST00000604187 969 ntBASIC14.95□□□□□ -0.02
LRCH3Q96II8 AC091905.3-201ENST00000624959 234 ntBASIC14.95□□□□□ -0.02
LRCH3Q96II8 ADORA3-204ENST00000632535 1201 ntTSL 3 BASIC14.95□□□□□ -0.02
LRCH3Q96II8 MEP1AP1-201ENST00000636082 1097 ntBASIC14.95□□□□□ -0.02
LRCH3Q96II8 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
LRCH3Q96II8 PCDHA3-202ENST00000532566 4594 ntBASIC14.95□□□□□ -0.02
LRCH3Q96II8 IMMT-212ENST00000620815 1520 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
LRCH3Q96II8 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
LRCH3Q96II8 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC14.95□□□□□ -0.02
LRCH3Q96II8 BANP-203ENST00000393207 2438 ntTSL 2 BASIC14.95□□□□□ -0.02
LRCH3Q96II8 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC14.94□□□□□ -0.02
LRCH3Q96II8 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
LRCH3Q96II8 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC14.94□□□□□ -0.02
LRCH3Q96II8 TUBA3GP-201ENST00000410028 1325 ntBASIC14.94□□□□□ -0.02
LRCH3Q96II8 SLC25A31-201ENST00000281154 1841 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
LRCH3Q96II8 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC14.94□□□□□ -0.02
LRCH3Q96II8 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
LRCH3Q96II8 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
LRCH3Q96II8 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
LRCH3Q96II8 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
LRCH3Q96II8 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
LRCH3Q96II8 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
LRCH3Q96II8 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
LRCH3Q96II8 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
LRCH3Q96II8 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
LRCH3Q96II8 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
LRCH3Q96II8 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
LRCH3Q96II8 RPL10L-201ENST00000298283 812 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
LRCH3Q96II8 RNF181-201ENST00000306368 569 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
LRCH3Q96II8 CALML6-201ENST00000307786 1101 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
LRCH3Q96II8 IL6RP1-201ENST00000417848 1273 ntBASIC14.94□□□□□ -0.02
LRCH3Q96II8 AC007383.2-201ENST00000420509 752 ntTSL 2 BASIC14.94□□□□□ -0.02
LRCH3Q96II8 HNRNPA3P12-201ENST00000437410 1063 ntBASIC14.94□□□□□ -0.02
LRCH3Q96II8 AC114939.1-201ENST00000520980 514 ntTSL 5 BASIC14.94□□□□□ -0.02
LRCH3Q96II8 SCGB1A1-202ENST00000534397 466 ntTSL 3 BASIC14.94□□□□□ -0.02
LRCH3Q96II8 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
LRCH3Q96II8 GABARAPL1-203ENST00000535576 792 ntTSL 5 BASIC14.94□□□□□ -0.02
LRCH3Q96II8 ALG10-202ENST00000538927 571 ntTSL 5 BASIC14.94□□□□□ -0.02
LRCH3Q96II8 AC092720.1-202ENST00000565824 555 ntTSL 4 BASIC14.94□□□□□ -0.02
LRCH3Q96II8 ARL17B-207ENST00000575960 731 ntAPPRIS ALT2 TSL 3 BASIC14.94□□□□□ -0.02
LRCH3Q96II8 PSME3-213ENST00000592169 826 ntTSL 3 BASIC14.94□□□□□ -0.02
LRCH3Q96II8 AC092634.5-206ENST00000593670 812 ntTSL 5 BASIC14.94□□□□□ -0.02
LRCH3Q96II8 AL031673.1-201ENST00000611460 466 ntBASIC14.94□□□□□ -0.02
LRCH3Q96II8 AC099552.4-201ENST00000624248 949 ntBASIC14.94□□□□□ -0.02
LRCH3Q96II8 AC245369.8-201ENST00000636589 306 ntBASIC14.94□□□□□ -0.02
LRCH3Q96II8 ADH1B-207ENST00000639454 1210 ntTSL 5 BASIC14.94□□□□□ -0.02
LRCH3Q96II8 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
LRCH3Q96II8 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC14.94□□□□□ -0.02
LRCH3Q96II8 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
LRCH3Q96II8 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
LRCH3Q96II8 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC14.94□□□□□ -0.02
LRCH3Q96II8 GAPDHS-201ENST00000222286 1489 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
LRCH3Q96II8 MAGEH1-201ENST00000342972 1462 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
LRCH3Q96II8 LMO3-212ENST00000535535 1488 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
LRCH3Q96II8 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
LRCH3Q96II8 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC14.94□□□□□ -0.02
LRCH3Q96II8 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC14.94□□□□□ -0.02
LRCH3Q96II8 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
LRCH3Q96II8 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
LRCH3Q96II8 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC14.94□□□□□ -0.02
LRCH3Q96II8 ZSCAN21-203ENST00000456748 1904 ntTSL 5 BASIC14.94□□□□□ -0.02
LRCH3Q96II8 AC097359.2-201ENST00000604992 2389 ntBASIC14.93□□□□□ -0.02
LRCH3Q96II8 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC14.93□□□□□ -0.02
LRCH3Q96II8 SALL4P6-201ENST00000429385 1691 ntBASIC14.93□□□□□ -0.02
LRCH3Q96II8 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC14.93□□□□□ -0.02
LRCH3Q96II8 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC14.93□□□□□ -0.02
LRCH3Q96II8 GOLGA8UP-201ENST00000527159 1755 ntBASIC14.93□□□□□ -0.02
LRCH3Q96II8 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
LRCH3Q96II8 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
LRCH3Q96II8 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC14.93□□□□□ -0.02
LRCH3Q96II8 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LRCH3Q96II8 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LRCH3Q96II8 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC14.93□□□□□ -0.02
LRCH3Q96II8 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LRCH3Q96II8 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC14.93□□□□□ -0.02
LRCH3Q96II8 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC14.93□□□□□ -0.02
LRCH3Q96II8 AL031590.1-202ENST00000641466 1737 ntBASIC14.93□□□□□ -0.02
LRCH3Q96II8 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
LRCH3Q96II8 EDF1-201ENST00000224073 640 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LRCH3Q96II8 RNA5SP491-201ENST00000362936 118 ntBASIC14.93□□□□□ -0.02
LRCH3Q96II8 U3.5-201ENST00000363448 216 ntBASIC14.93□□□□□ -0.02
LRCH3Q96II8 C6orf48-202ENST00000375635 610 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
LRCH3Q96II8 CASP8-206ENST00000392258 1060 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
LRCH3Q96II8 C6orf48-209ENST00000395789 952 ntAPPRIS P1 TSL 3 BASIC14.93□□□□□ -0.02
LRCH3Q96II8 GAPDH-204ENST00000396859 1256 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LRCH3Q96II8 AC245128.1-201ENST00000400864 1294 ntTSL 5 BASIC14.93□□□□□ -0.02
LRCH3Q96II8 MRPL19-203ENST00000409374 1076 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
LRCH3Q96II8 AL513165.1-201ENST00000413915 289 ntTSL 3 BASIC14.93□□□□□ -0.02
LRCH3Q96II8 ATP6V1B1-AS1-201ENST00000422761 1129 ntTSL 2 BASIC14.93□□□□□ -0.02
LRCH3Q96II8 HLA-DQB3-203ENST00000425319 356 ntBASIC14.93□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms