Protein–RNA interactions for Protein: Q8NFU1

BEST2, Bestrophin-2, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST2Q8NFU1 MAP2K3-214ENST00000613338 2029 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
BEST2Q8NFU1 PCMTD1-201ENST00000360540 4252 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
BEST2Q8NFU1 HES2-201ENST00000377834 4262 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
BEST2Q8NFU1 INO80-202ENST00000401393 5991 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
BEST2Q8NFU1 HSP90AA1-201ENST00000216281 3379 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
BEST2Q8NFU1 JPH3-201ENST00000284262 3985 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
BEST2Q8NFU1 ARL1-202ENST00000536227 1322 ntTSL 2 BASIC14.86□□□□□ -0.03
BEST2Q8NFU1 STX16-207ENST00000371141 4937 ntAPPRIS P3 TSL 2 BASIC14.86□□□□□ -0.03
BEST2Q8NFU1 GP6-201ENST00000310373 2268 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
BEST2Q8NFU1 CEMIP-201ENST00000220244 7226 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
BEST2Q8NFU1 KDM2B-202ENST00000377071 4595 ntAPPRIS P4 TSL 1 (best) BASIC14.86□□□□□ -0.03
BEST2Q8NFU1 CRACR2A-203ENST00000440314 2697 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
BEST2Q8NFU1 MARK2P9-201ENST00000430958 1727 ntBASIC14.86□□□□□ -0.03
BEST2Q8NFU1 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
BEST2Q8NFU1 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
BEST2Q8NFU1 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC14.86□□□□□ -0.03
BEST2Q8NFU1 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
BEST2Q8NFU1 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
BEST2Q8NFU1 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
BEST2Q8NFU1 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
BEST2Q8NFU1 LINC01002-209ENST00000631858 1761 ntTSL 2 BASIC14.85□□□□□ -0.03
BEST2Q8NFU1 PRAME-205ENST00000405655 2179 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
BEST2Q8NFU1 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
BEST2Q8NFU1 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
BEST2Q8NFU1 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
BEST2Q8NFU1 TBX6-202ENST00000395224 1803 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
BEST2Q8NFU1 AL365181.1-201ENST00000564032 1828 ntBASIC14.85□□□□□ -0.03
BEST2Q8NFU1 MRPL55-205ENST00000366731 1423 ntTSL 2 BASIC14.85□□□□□ -0.03
BEST2Q8NFU1 CYP51A1P3-201ENST00000400072 1428 ntBASIC14.85□□□□□ -0.03
BEST2Q8NFU1 ZMIZ1-AS1-203ENST00000456353 2878 ntTSL 2 BASIC14.85□□□□□ -0.03
BEST2Q8NFU1 LINC00637-201ENST00000556586 2056 ntTSL 2 BASIC14.85□□□□□ -0.03
BEST2Q8NFU1 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
BEST2Q8NFU1 ZNF395-201ENST00000344423 4808 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
BEST2Q8NFU1 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
BEST2Q8NFU1 VEGFA-201ENST00000230480 993 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
BEST2Q8NFU1 PON3-201ENST00000265627 1105 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
BEST2Q8NFU1 INO80C-202ENST00000334598 974 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
BEST2Q8NFU1 PPIA-201ENST00000355968 818 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
BEST2Q8NFU1 HCRTR1-201ENST00000373705 1170 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
BEST2Q8NFU1 AC061961.1-201ENST00000443901 432 ntTSL 3 BASIC14.85□□□□□ -0.03
BEST2Q8NFU1 TLN2-202ENST00000472902 2116 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
BEST2Q8NFU1 PPIA-208ENST00000489459 907 ntTSL 2 BASIC14.85□□□□□ -0.03
BEST2Q8NFU1 MAN2B2-202ENST00000504248 2968 ntTSL 2 BASIC14.85□□□□□ -0.03
BEST2Q8NFU1 ALG1L6P-201ENST00000515248 758 ntBASIC14.85□□□□□ -0.03
BEST2Q8NFU1 AC025154.2-203ENST00000550214 1031 ntTSL 2 BASIC14.85□□□□□ -0.03
BEST2Q8NFU1 NPTN-204ENST00000562924 1094 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
BEST2Q8NFU1 COX5A-205ENST00000568517 582 ntTSL 3 BASIC14.85□□□□□ -0.03
BEST2Q8NFU1 RN7SL556P-201ENST00000582856 298 ntBASIC14.85□□□□□ -0.03
BEST2Q8NFU1 AC011472.1-201ENST00000588634 569 ntTSL 4 BASIC14.85□□□□□ -0.03
BEST2Q8NFU1 NAMA-206ENST00000605377 509 ntTSL 5 BASIC14.85□□□□□ -0.03
BEST2Q8NFU1 PPIA-210ENST00000620047 827 ntTSL 5 BASIC14.85□□□□□ -0.03
BEST2Q8NFU1 TREX1-206ENST00000629913 945 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
BEST2Q8NFU1 HLA-C-210ENST00000640219 976 ntBASIC14.85□□□□□ -0.03
BEST2Q8NFU1 MEFV-203ENST00000536379 1713 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
BEST2Q8NFU1 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
BEST2Q8NFU1 CTBP2P8-201ENST00000422584 1330 ntBASIC14.85□□□□□ -0.03
BEST2Q8NFU1 SPDYA-202ENST00000379579 1759 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
BEST2Q8NFU1 LMAN2L-202ENST00000377079 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
BEST2Q8NFU1 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC14.85□□□□□ -0.03
BEST2Q8NFU1 LINC00511-213ENST00000581549 2265 ntTSL 2 BASIC14.85□□□□□ -0.03
BEST2Q8NFU1 AC002407.1-201ENST00000636668 3863 ntTSL 5 BASIC14.85□□□□□ -0.03
BEST2Q8NFU1 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC14.85□□□□□ -0.03
BEST2Q8NFU1 SFXN4-201ENST00000355697 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
BEST2Q8NFU1 FUCA1P1-201ENST00000374476 1351 ntBASIC14.85□□□□□ -0.03
BEST2Q8NFU1 CATSPERD-202ENST00000381624 2516 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
BEST2Q8NFU1 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC14.85□□□□□ -0.03
BEST2Q8NFU1 DLG2-205ENST00000398301 2070 ntTSL 2 BASIC14.85□□□□□ -0.03
BEST2Q8NFU1 PARP1-203ENST00000366794 3958 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
BEST2Q8NFU1 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
BEST2Q8NFU1 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
BEST2Q8NFU1 RDH12-203ENST00000551171 1879 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
BEST2Q8NFU1 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
BEST2Q8NFU1 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
BEST2Q8NFU1 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
BEST2Q8NFU1 CCNG2-202ENST00000395640 1410 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
BEST2Q8NFU1 MYLK-208ENST00000475616 5745 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
BEST2Q8NFU1 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC14.84□□□□□ -0.03
BEST2Q8NFU1 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
BEST2Q8NFU1 MTMR3-204ENST00000401950 6018 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
BEST2Q8NFU1 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
BEST2Q8NFU1 CLEC20A-202ENST00000623247 1491 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
BEST2Q8NFU1 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
BEST2Q8NFU1 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
BEST2Q8NFU1 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
BEST2Q8NFU1 AC073869.1-201ENST00000415574 2762 ntBASIC14.84□□□□□ -0.03
BEST2Q8NFU1 GALNT7-201ENST00000265000 4307 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
BEST2Q8NFU1 PDLIM5-203ENST00000359265 1189 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
BEST2Q8NFU1 APOA1-203ENST00000375320 940 ntAPPRIS P1 TSL 3 BASIC14.84□□□□□ -0.03
BEST2Q8NFU1 GEMIN7-202ENST00000391951 716 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
BEST2Q8NFU1 GAPDH-204ENST00000396859 1256 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
BEST2Q8NFU1 LINC01022-201ENST00000415652 394 ntTSL 3 BASIC14.84□□□□□ -0.03
BEST2Q8NFU1 AC097065.1-201ENST00000425737 517 ntBASIC14.84□□□□□ -0.03
BEST2Q8NFU1 RPL13AP19-201ENST00000434320 584 ntBASIC14.84□□□□□ -0.03
BEST2Q8NFU1 AL353658.1-201ENST00000436263 789 ntTSL 2 BASIC14.84□□□□□ -0.03
BEST2Q8NFU1 RN7SL818P-201ENST00000485099 259 ntBASIC14.84□□□□□ -0.03
BEST2Q8NFU1 AC004889.1-205ENST00000493248 531 ntTSL 4 BASIC14.84□□□□□ -0.03
BEST2Q8NFU1 OR2A1-AS1-210ENST00000496968 531 ntBASIC14.84□□□□□ -0.03
BEST2Q8NFU1 AC084752.1-201ENST00000509766 622 ntBASIC14.84□□□□□ -0.03
BEST2Q8NFU1 CD44-224ENST00000526669 870 ntTSL 5 BASIC14.84□□□□□ -0.03
BEST2Q8NFU1 AC005323.2-202ENST00000581304 493 ntTSL 3 BASIC14.84□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 52.5 ms