Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 AL022725.1-201ENST00000436283 369 ntTSL 2 BASIC16.99■□□□□ 0.31
RC3H1Q5TC82 AP000959.1-201ENST00000441759 977 ntTSL 3 BASIC16.99■□□□□ 0.31
RC3H1Q5TC82 TRBV11-2-201ENST00000471935 408 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
RC3H1Q5TC82 IGKV3-11-201ENST00000483158 392 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
RC3H1Q5TC82 NDUFA3-214ENST00000485876 963 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RC3H1Q5TC82 AC108112.1-201ENST00000505567 659 ntTSL 5 BASIC16.99■□□□□ 0.31
RC3H1Q5TC82 PRDX2P3-201ENST00000515779 586 ntBASIC16.99■□□□□ 0.31
RC3H1Q5TC82 AC008750.2-201ENST00000526996 627 ntTSL 3 BASIC16.99■□□□□ 0.31
RC3H1Q5TC82 LINC02328-202ENST00000554647 522 ntTSL 4 BASIC16.99■□□□□ 0.31
RC3H1Q5TC82 AC136698.1-201ENST00000558110 546 ntTSL 4 BASIC16.99■□□□□ 0.31
RC3H1Q5TC82 AC048382.4-201ENST00000559065 546 ntTSL 4 BASIC16.99■□□□□ 0.31
RC3H1Q5TC82 TLE2-205ENST00000586422 389 ntTSL 5 BASIC16.99■□□□□ 0.31
RC3H1Q5TC82 AC025048.4-201ENST00000589740 699 ntTSL 3 BASIC16.99■□□□□ 0.31
RC3H1Q5TC82 TRPC5OS-203ENST00000635763 955 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
RC3H1Q5TC82 AC099795.2-201ENST00000639582 440 ntBASIC16.99■□□□□ 0.31
RC3H1Q5TC82 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
RC3H1Q5TC82 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC16.99■□□□□ 0.31
RC3H1Q5TC82 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC16.99■□□□□ 0.31
RC3H1Q5TC82 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
RC3H1Q5TC82 HPGD-204ENST00000504433 1910 ntTSL 2 BASIC16.99■□□□□ 0.31
RC3H1Q5TC82 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RC3H1Q5TC82 TBC1D8B-202ENST00000310452 2589 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
RC3H1Q5TC82 TMEM78-201ENST00000323223 2175 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
RC3H1Q5TC82 ASMT-203ENST00000381241 1388 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
RC3H1Q5TC82 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
RC3H1Q5TC82 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RC3H1Q5TC82 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RC3H1Q5TC82 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
RC3H1Q5TC82 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RC3H1Q5TC82 DRD2-204ENST00000538967 1493 ntAPPRIS ALT1 TSL 5 BASIC16.99■□□□□ 0.31
RC3H1Q5TC82 IGHE-202ENST00000641420 1485 ntAPPRIS P5 BASIC16.99■□□□□ 0.31
RC3H1Q5TC82 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RC3H1Q5TC82 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RC3H1Q5TC82 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RC3H1Q5TC82 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RC3H1Q5TC82 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RC3H1Q5TC82 TMUB2-205ENST00000587172 1598 ntTSL 2 BASIC16.98■□□□□ 0.31
RC3H1Q5TC82 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RC3H1Q5TC82 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
RC3H1Q5TC82 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
RC3H1Q5TC82 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC16.98■□□□□ 0.31
RC3H1Q5TC82 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
RC3H1Q5TC82 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC16.98■□□□□ 0.31
RC3H1Q5TC82 TRBV20OR9-2-201ENST00000379435 416 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
RC3H1Q5TC82 MRPL48-203ENST00000398483 1058 ntTSL 3 BASIC16.98■□□□□ 0.31
RC3H1Q5TC82 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RC3H1Q5TC82 AC005822.1-201ENST00000414124 1034 ntBASIC16.98■□□□□ 0.31
RC3H1Q5TC82 ZNF32-AS2-201ENST00000418966 905 ntTSL 5 BASIC16.98■□□□□ 0.31
RC3H1Q5TC82 AL590399.1-204ENST00000430302 781 ntTSL 5 BASIC16.98■□□□□ 0.31
RC3H1Q5TC82 HTATIP2-203ENST00000443524 967 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
RC3H1Q5TC82 AC025822.1-201ENST00000455525 633 ntTSL 2 BASIC16.98■□□□□ 0.31
RC3H1Q5TC82 HOXB-AS3-209ENST00000477144 743 ntTSL 5 BASIC16.98■□□□□ 0.31
RC3H1Q5TC82 RN7SL638P-201ENST00000494527 290 ntBASIC16.98■□□□□ 0.31
RC3H1Q5TC82 TMEM154-202ENST00000504064 878 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
RC3H1Q5TC82 AC068858.1-201ENST00000525114 1239 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
RC3H1Q5TC82 AL583722.3-201ENST00000553433 503 ntTSL 4 BASIC16.98■□□□□ 0.31
RC3H1Q5TC82 AC116552.1-201ENST00000563243 733 ntTSL 3 BASIC16.98■□□□□ 0.31
RC3H1Q5TC82 AC005332.2-201ENST00000590010 930 ntBASIC16.98■□□□□ 0.31
RC3H1Q5TC82 ADCK1-201ENST00000238561 2234 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RC3H1Q5TC82 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
RC3H1Q5TC82 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
RC3H1Q5TC82 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
RC3H1Q5TC82 SAP18-208ENST00000621421 2300 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
RC3H1Q5TC82 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC16.98■□□□□ 0.31
RC3H1Q5TC82 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
RC3H1Q5TC82 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
RC3H1Q5TC82 CLUHP8-201ENST00000547527 1485 ntBASIC16.98■□□□□ 0.31
RC3H1Q5TC82 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
RC3H1Q5TC82 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RC3H1Q5TC82 ZCCHC9-203ENST00000407610 1555 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
RC3H1Q5TC82 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RC3H1Q5TC82 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC16.98■□□□□ 0.31
RC3H1Q5TC82 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC16.98■□□□□ 0.31
RC3H1Q5TC82 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
RC3H1Q5TC82 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
RC3H1Q5TC82 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RC3H1Q5TC82 NPPB-201ENST00000376468 694 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RC3H1Q5TC82 C20orf141-201ENST00000380589 730 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RC3H1Q5TC82 PGAM1P10-201ENST00000402426 761 ntBASIC16.97■□□□□ 0.31
RC3H1Q5TC82 APOBEC3B-204ENST00000407298 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
RC3H1Q5TC82 PTPA-219ENST00000435305 530 ntTSL 2 BASIC16.97■□□□□ 0.31
RC3H1Q5TC82 RPL13AP5-201ENST00000439189 612 ntBASIC16.97■□□□□ 0.31
RC3H1Q5TC82 SOX2-OT-203ENST00000466034 926 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
RC3H1Q5TC82 PDPN-208ENST00000509009 571 ntTSL 4 BASIC16.97■□□□□ 0.31
RC3H1Q5TC82 EEF1AKMT3-203ENST00000548256 561 ntTSL 4 BASIC16.97■□□□□ 0.31
RC3H1Q5TC82 MIR4539-201ENST00000579784 60 ntBASIC16.97■□□□□ 0.31
RC3H1Q5TC82 RN7SL202P-201ENST00000584410 262 ntBASIC16.97■□□□□ 0.31
RC3H1Q5TC82 SOX2-OT-221ENST00000594942 675 ntTSL 5 BASIC16.97■□□□□ 0.31
RC3H1Q5TC82 AL139220.2-222ENST00000627999 756 ntTSL 5 BASIC16.97■□□□□ 0.31
RC3H1Q5TC82 SMYD5-209ENST00000629411 246 ntTSL 5 BASIC16.97■□□□□ 0.31
RC3H1Q5TC82 ALDOA-229ENST00000636698 420 ntTSL 3 BASIC16.97■□□□□ 0.31
RC3H1Q5TC82 CDIPT-AS1-203ENST00000638164 713 ntBASIC16.97■□□□□ 0.31
RC3H1Q5TC82 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
RC3H1Q5TC82 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
RC3H1Q5TC82 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RC3H1Q5TC82 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RC3H1Q5TC82 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RC3H1Q5TC82 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
RC3H1Q5TC82 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
RC3H1Q5TC82 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms