Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 LINC00638-201ENST00000555578 2518 ntBASIC12.4□□□□□ -0.42
H3F3AP84243 URGCP-207ENST00000453200 4042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
H3F3AP84243 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
H3F3AP84243 AC099521.3-201ENST00000624251 2938 ntBASIC12.4□□□□□ -0.42
H3F3AP84243 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
H3F3AP84243 F2-205ENST00000530231 1849 ntTSL 5 BASIC12.4□□□□□ -0.42
H3F3AP84243 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
H3F3AP84243 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC12.4□□□□□ -0.42
H3F3AP84243 SUCO-201ENST00000263688 5556 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
H3F3AP84243 PSMB10-201ENST00000358514 1218 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
H3F3AP84243 SOD2-202ENST00000367054 815 ntTSL 2 BASIC12.4□□□□□ -0.42
H3F3AP84243 GGTLC4P-201ENST00000402176 664 ntBASIC12.4□□□□□ -0.42
H3F3AP84243 RPL3P2-204ENST00000413027 1203 ntBASIC12.4□□□□□ -0.42
H3F3AP84243 MOCS1-207ENST00000432280 1071 ntTSL 5 BASIC12.4□□□□□ -0.42
H3F3AP84243 HNRNPA1P2-207ENST00000432375 960 ntBASIC12.4□□□□□ -0.42
H3F3AP84243 LINC00466-203ENST00000436475 1059 ntTSL 5 BASIC12.4□□□□□ -0.42
H3F3AP84243 IL1R2-203ENST00000441002 1106 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
H3F3AP84243 AL139246.4-201ENST00000442305 514 ntTSL 3 BASIC12.4□□□□□ -0.42
H3F3AP84243 AL606489.1-201ENST00000443515 486 ntTSL 3 BASIC12.4□□□□□ -0.42
H3F3AP84243 AL356218.1-201ENST00000450864 353 ntTSL 3 BASIC12.4□□□□□ -0.42
H3F3AP84243 LY6G6C-202ENST00000495859 937 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
H3F3AP84243 OR5BD1P-201ENST00000532527 817 ntBASIC12.4□□□□□ -0.42
H3F3AP84243 SOCS2-AS1-204ENST00000551626 618 ntTSL 4 BASIC12.4□□□□□ -0.42
H3F3AP84243 TMEM231-206ENST00000565067 1078 ntTSL 5 BASIC12.4□□□□□ -0.42
H3F3AP84243 MT3-203ENST00000565838 421 ntTSL 3 BASIC12.4□□□□□ -0.42
H3F3AP84243 AC008982.2-201ENST00000600473 493 ntTSL 5 BASIC12.4□□□□□ -0.42
H3F3AP84243 AC084781.1-201ENST00000613737 656 ntBASIC12.4□□□□□ -0.42
H3F3AP84243 ZNF541-202ENST00000314121 4631 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
H3F3AP84243 AC040160.2-201ENST00000623816 1675 ntBASIC12.4□□□□□ -0.42
H3F3AP84243 CCNC-210ENST00000520429 2473 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
H3F3AP84243 PPP4R3B-205ENST00000616288 4310 ntAPPRIS ALT1 TSL 1 (best) BASIC12.4□□□□□ -0.42
H3F3AP84243 PRKACB-205ENST00000370688 1905 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
H3F3AP84243 CR382287.2-201ENST00000623370 1942 ntTSL 2 BASIC12.4□□□□□ -0.42
H3F3AP84243 IMMT-212ENST00000620815 1520 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
H3F3AP84243 AXL-203ENST00000593513 2557 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
H3F3AP84243 MED14-201ENST00000324817 7984 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
H3F3AP84243 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
H3F3AP84243 ANXA5-202ENST00000501272 1363 ntTSL 5 BASIC12.4□□□□□ -0.42
H3F3AP84243 FTX-216ENST00000638985 1367 ntTSL 5 BASIC12.4□□□□□ -0.42
H3F3AP84243 KIF12-201ENST00000374118 2001 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
H3F3AP84243 EDN1-201ENST00000379375 2033 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
H3F3AP84243 RIPOR3-202ENST00000327979 4377 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
H3F3AP84243 PTPA-205ENST00000357197 2653 ntTSL 2 BASIC12.4□□□□□ -0.42
H3F3AP84243 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC12.4□□□□□ -0.42
H3F3AP84243 CCDC86-201ENST00000227520 1893 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
H3F3AP84243 GOLGA8IP-201ENST00000340249 1899 ntTSL 2 BASIC12.4□□□□□ -0.42
H3F3AP84243 RCC2P5-201ENST00000492126 1487 ntBASIC12.4□□□□□ -0.43
H3F3AP84243 FAM129B-202ENST00000373314 3760 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
H3F3AP84243 PSIP1-204ENST00000380738 3364 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
H3F3AP84243 UGGT2-201ENST00000376712 2240 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
H3F3AP84243 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC12.39□□□□□ -0.43
H3F3AP84243 RHOG-201ENST00000351018 1319 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
H3F3AP84243 ARHGEF33-202ENST00000409978 4484 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
H3F3AP84243 TMEM9-203ENST00000367333 1564 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
H3F3AP84243 NME7-203ENST00000472647 1590 ntAPPRIS ALT2 TSL 2 BASIC12.39□□□□□ -0.43
H3F3AP84243 DDX46-212ENST00000628477 1584 ntTSL 5 BASIC12.39□□□□□ -0.43
H3F3AP84243 COL6A3-206ENST00000409809 8916 ntTSL 5 BASIC12.39□□□□□ -0.43
H3F3AP84243 DSN1-204ENST00000426836 2441 ntAPPRIS P3 TSL 2 BASIC12.39□□□□□ -0.43
H3F3AP84243 TMEM78-201ENST00000323223 2175 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
H3F3AP84243 MGRN1-211ENST00000588994 1665 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
H3F3AP84243 PPP3R1-201ENST00000234310 3023 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
H3F3AP84243 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
H3F3AP84243 ZNF493-208ENST00000599461 1769 ntBASIC12.39□□□□□ -0.43
H3F3AP84243 NLRX1-201ENST00000292199 3744 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
H3F3AP84243 LINC01341-202ENST00000421003 2600 ntTSL 2 BASIC12.39□□□□□ -0.43
H3F3AP84243 CERKL-206ENST00000410087 3208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
H3F3AP84243 FARP2-201ENST00000264042 4051 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
H3F3AP84243 NRIP3-201ENST00000309166 3809 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
H3F3AP84243 NSMCE1-201ENST00000361439 1067 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
H3F3AP84243 AC106827.1-201ENST00000366454 431 ntBASIC12.39□□□□□ -0.43
H3F3AP84243 TPM3-211ENST00000368531 1115 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
H3F3AP84243 CSAG1-203ENST00000370291 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
H3F3AP84243 UFM1-202ENST00000379649 846 ntTSL 4 BASIC12.39□□□□□ -0.43
H3F3AP84243 AL512430.1-201ENST00000392575 860 ntBASIC12.39□□□□□ -0.43
H3F3AP84243 OR2W2P-201ENST00000406313 909 ntBASIC12.39□□□□□ -0.43
H3F3AP84243 AC061961.1-201ENST00000443901 432 ntTSL 3 BASIC12.39□□□□□ -0.43
H3F3AP84243 PPP2R1A-209ENST00000477989 444 ntTSL 3 BASIC12.39□□□□□ -0.43
H3F3AP84243 RN7SL564P-201ENST00000496309 250 ntBASIC12.39□□□□□ -0.43
H3F3AP84243 NDUFC2-KCTD14-202ENST00000530054 656 ntAPPRIS P3 TSL 2 BASIC12.39□□□□□ -0.43
H3F3AP84243 NAV2-AS2-201ENST00000533767 782 ntTSL 2 BASIC12.39□□□□□ -0.43
H3F3AP84243 AC090825.1-202ENST00000560059 665 ntTSL 3 BASIC12.39□□□□□ -0.43
H3F3AP84243 TMEM98-205ENST00000578289 806 ntTSL 3 BASIC12.39□□□□□ -0.43
H3F3AP84243 ZNF286A-212ENST00000580259 527 ntTSL 4 BASIC12.39□□□□□ -0.43
H3F3AP84243 ATF7-212ENST00000591397 860 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
H3F3AP84243 AC012073.1-201ENST00000606114 1108 ntBASIC12.39□□□□□ -0.43
H3F3AP84243 GHRHR-212ENST00000611037 923 ntTSL 5 BASIC12.39□□□□□ -0.43
H3F3AP84243 MAP7-205ENST00000544465 2744 ntAPPRIS ALT2 TSL 2 BASIC12.39□□□□□ -0.43
H3F3AP84243 AC237221.1-201ENST00000561575 1881 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
H3F3AP84243 SAMD4A-202ENST00000392067 6833 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
H3F3AP84243 MINDY4B-201ENST00000465419 1383 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
H3F3AP84243 AP1G2-201ENST00000308724 3298 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
H3F3AP84243 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC12.39□□□□□ -0.43
H3F3AP84243 SERPINA13P-201ENST00000469935 1718 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
H3F3AP84243 MECP2-217ENST00000628176 1712 ntTSL 3 BASIC12.39□□□□□ -0.43
H3F3AP84243 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
H3F3AP84243 FAM219A-201ENST00000297620 3588 ntAPPRIS P3 TSL 2 BASIC12.39□□□□□ -0.43
H3F3AP84243 ARHGEF17-201ENST00000263674 7853 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
H3F3AP84243 CFAP43-201ENST00000278064 2963 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
H3F3AP84243 GP6-201ENST00000310373 2268 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
H3F3AP84243 RRAGA-201ENST00000380527 1589 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms